LCMSMS Bpom
LCMSMS Bpom
MOBILE PHASE
• Aditif:
• Acetic acid at 0.1 - 1.0 % v/v
• Formic acid at 0.1% v/v
• Ammonium formate (2-10 mM optimum)
• Ammonium acetate (2-10 mM optimum)
• TFA at up to 0.1% for positive ion mode
%B %B
80 80
20 20
DP EP CEP CXP
CE CEM
Multi-contaminant testing
- Mycotoxins
- Polycyclic Aromatic Hydrocarbons
- Phthalates
- Food Additives
- Pesticides
- Fungicides
- Melamine
Ingredient analysis
Migrations
Halal Food Testing
Veterinary Drugs
Water Quality Testing
Vitamins Analysis
PHARMACEUTICAL APPLICATIONS
• Pharmaceutical
• BA/BE
• Impurities Profiling
• Drugs Metabolism & Pharmacokinetic (DMPK)
• ADME/Toxic
• Metabolomics
• Metabolites profiling and quantification
• Lipidomics
• Lipid profiling and identification
• Lipid quantification
LC-MS/MS SYSTEM
Mass
HPLC
Spectrometer
Nitrogen
Generator
Chromatographic separation with UV
detector
• LC separations occur HPLC Column
based on differential
F E D C BA
partitioning of analyte in F E D
F E D
C BA
C BA
the stationary phase
Injection UV
• Pressure-driven bulk flow Plug Detection
rates are typically at 50-
1000 mL/min AB C
DE
• Separation efficiency is F
Intensity
high
Retention time
MASS Detection
SPECTROMETER differentiates RT
UV
Detecor
THE FIRST RULE OF CHEMISTRY THE BASIS
OF MOST LIQUID CHROMATOGRAPHY
Chromatography is a method in which the components of a mixture
are separated on an adsorbent column in a flowing system.
• Components of a mixture are carried through a stationary phase by the
flow of a mobile phase.
• Separations are based on differences in migration rates among the
sample components.
The smaller the affinity a molecule has for the stationary phase, the shorter the time spent in
a column.
Stationary phase
Mobile phase
Solvent
A+B
Packed A
B
column
A
B
detector A B
t0 t1 t2 t3 t4
Signal
A B
Time, t
WHAT’S THE MASS SPECTROMETRY & HOW DOES
IT WORK?
Ion Detector
MS Analyzer
Ion Source
Form ions
(charged molecules) Sort Ions by MW to charge ratio (m/z) Detect ions
100
100
75
75
50
50
• Solid
25
• Liquid
25
Inlet
• Vapor 00
1330
1330 1340
1340 1350
1350
• HPLC
Mass Spectrum
Sample Introduction •Quantitation
Data Analysis •Structure elucidation
Method to vaporize sample
Bioinformatics
TURBO V ION SOURCE
IONIZATION TECHNIQUES TO CONVERT MOLECULES TO IONS
WHAT IS A MASS SPECTROMETER?
No of Carbons atoms = 12
Sucrose No of Hydrogen atoms = 22
No of Oxygen atoms = 11
MASS SPECTROMETRY
• MS measures the “molecular weight” of molecules.
• MS detects and separates ions from each other based on their mass to charge ratio
(m/z).
• For e.g.
Melamine C3H6N6
Exact/Monoisotopic Mass: 126.0654
[M+H]+ = 127.1
1
Molecular ion mass = (M + Z) / Z
optional
3. PhotoSprayTM – (APPI) atmospheric pressure photo ionization
4. MALDI "Matrix Assisted Laser Desorption/Ionization”
ELECTRO SPRAY IONIZATION (ESI)
IonSpray:
- Electrospray ionization (ESI)
- Soft ionization
- Gentlest ionization technique
- Applicable to polar and ionic substances
ATMOSPHERIC CHEMICAL PRESSURE IONIZATION
(APCI)
Q1 Q2 Q3
Fragmentation
m2 m1
m4 m3 m2 m1
m4 m3
m2 m1
m2 m2 m2 m2
m4 m3
m1
m3
m4
H
+ NH 2 NH 2 N NH 2 m/z = 85
Daughter ion
N N
NH 2 N NH 2
m/z = 127
Parent ion
MSMS FRAGMENTATION OF MELAMINE
N
H
+ NH 2 NH 2 N NH 2 m/z = 85
N
N N
C
NH 2 N m/z = 68
NH 2 N NH 2
m/z = 127
MSMS FRAGMENTATION OF MELAMINE
N
H
+ NH 2 NH 2 N NH 2 m/z = 85
N
N N
C
NH 2 N m/z = 68
NH 2 N NH 2
NH 2
m/z = 127
m/z = 43
N
85.0
8.9e5
8.5e5
N
C
8.0e5
NH 2 N N
68.1
7.5e5
NH 2 N NH 2
7.0e5
6.5e5
6.0e5
5.5e5
In te n s ity , c p s
5.0e5
4.5e5
4.0e5
NH 2
+H
NH 2
3.5e5
3.0e5 N N N
43.1
2.5e5
2.0e5 NH 2 N NH 2
1.5e5 127.2
1.0e5
60.0
41.0 57.0
5.0e4 67.0
55.0 79.0 80.9 110.3
65.1
0.0
40 45 50 55 60 65 70 75 80 85 90 95 100 105 110 115 120 125 130 135 140 145 150
m/z, Da
IDENTIFICATION OF EURYCOMANONE IN TONGKAT ALI
EXTRACT
MRM
20eV
PI
35eV
PI
PI 50eV
CURRENT EU CRITERIA FOR TARGET CONFIRMATION
Guideline 2002/657/EG
Other guidelines
Full scan spectra (ions > 10% of base peak, mass spectral libraries)
High resolution MS (>10,000)
Introduction to MS-driven Quantitation
What is Multiple Reaction Monitoring (MRM) ?
XIC of +MRM (3 pairs): 127.000/85.300 Da from Sample 3 (40ppb std_ACN) of Std inertstil column batch .wiff (Turbo Spray) Max. 1.7e5 cps.
5.61
1.7e5
1.6e5
1.5e5 127/85
1.4e5
1.3e5
1.2e5
1.1e5
1.0e5
In te n s ity , c p s
9.0e4 127/68
8.0e4
7.0e4
6.0e4
5.0e4
4.0e4
127/43
3.0e4
2.0e4
1.0e4
0.0
3.8 4.0 4.2 4.4 4.6 4.8 5.0 5.2 5.4 5.6 5.8 6.0 6.2 6.4 6.6 6.8 7.0 7.2 7.4 7.6 7.8
Time, min
MODE OF OPERATION -QTRAP TECHNOLOGY
1.4e4
0.67
Max. 1.4e4 cps.
S/N = 2596.3
1.3e4
Peak Int.(Subt.)=1.4e+4
1.2e4
1xStd.Dev.(Noise)=5.4e+0
1.1e4
1.0e4
9000.0
8000.0
LOD Minimal 3 x SN
I n t e n s it y , c p s
7000.0
LOQ Minimal 10 x SN
6000.0
5000.0
4000.0
3000.0
2000.0
1000.0
! - Noise - !
0.0
0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0
Time, min
CROSS TALK
LINAC COLLISION CELL TECHNOLOGY ELIMINATES CROSS-TALK
XIC of +MRM (4 pairs): for 188.2 / 91.1 amu from Seleg 2500pg No-LINAC 1.04e6 cps XIC of +MRM (4 pairs): for 188.2 / 91.1 amu from Seleg 2500pg w LINAC 3.76e6 cps
100
25 ng Selegiline 3e6
25 ng Selegiline
80
Intensity, cps
60
% Intensity
2e6
40
1e6
20
XIC of +MRM (4 pairs): for 136.1 / 91.1 amu from Seleg 2500pg w LINAC 8.66e3 cps
XIC of +MRM (4 pairs): for 136.1 / 91.1 amu from Seleg 2500pg No-LINAC 3.67e4 cps
100
Dw e l l 1 0 0 m s e c 8000
No cross-talk visible with LINAC
80
False Amphetamine 6000
signal detected
Intensity, cps
60
% Intensity
2000
20
• Selegeline MRM: 188.2 amu > 91.1 amu, Amphetamine MRM: 136.1 amu > 91.1 amu
61
CRITICAL POINTS ANALYSIS LC-
MS/MS
CONSIDER THE AVERAGE FOOD TESTING WORKFLOW – AND ALL OF
THE QUESTIONS/CONCERNS/HEADACHES THAT COME ALONG WITH
IT…
LC
Extraction Clean-up MS analysis Identification Quantitation
separation
Example
6.4 9.1
4.0e4 10ppb Imazalil7000
3.5e4
6000
3.0e4 MRM ratio =
In ten sity, cp s
In ten sity, cp s
5000
2.5e4 0.63 0.093
4000
2.0e4
3000
1.5e4
1.0e4 2000
5000.0 1000
0.0 0
3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 7 8 9 10 11 12
Time, min Time, min
XIC of +MRM (202 pairs): 202.0/1... Max. 5.8e4 cps. XIC of +MRM (202 pairs): 297.0/... Max. 1000.0 cps.
6.5 9.3
5.8e4 1000
Imazalil in
5.0e4
sample?? 800
(10x diluted
?
In te nsity, cp s
In te nsity, cp s
4.0e4
600
3.0e4 extract)
400
2.0e4
MRM ratio =
200
1.0e4 0.50
0.0 0
4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 7 8 9 10 11 12
Time, min Time, min
Benefits of QTRAP® – Overcome matrix ambiguity
Example
1.00e5
3.5e4
2000
6000 8.00e4
MRM ratio =
I n t e n s it y , c p s
I n t e n s it y , c p s
3.0e4 1500
In ten sity, cp s
In ten sity, cp s
5000 6.00e4
3000
1.5e4 0.00
4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5
0
7 8 9 10 11 12
Time, min Time, min
1.0e4 2000 +EPI (202.00) Charge (+0) CE (3... Max. 2.9e6 cps. +EPI (297.00) Charge (+0) CE (3... Max. 8.0e5 cps.
297.2
5000.0 1000 4.0e6
8.0e5
159.1
7.0e5
3.5e6
0.0 0 3.0e6 202.2 6.0e5
3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 7 8 9 10 11 12
I n t e n s it y , c p s
I n t e n s it y , c p s
5.0e5
2.5e6
Time, min Time, min 175.2
2.0e6 4.0e5
XIC of +MRM (202 pairs): 202.0/1... Max. 5.8e4 cps. XIC of +MRM (202 pairs): 297.0/... Max. 1000.0 cps.
can
1.5e6 3.0e5 69.0
I s
173.2
6.5 9.3 2.0e5
P
1.0e6 131.2
5.8e4 1000
E
109.2 176.2201.0
Imazalil in 1.0e5 81.1
5.0e5 255.2
65.0 92.2 104.2 143.2
0.0
5.0e4 60 80 100 120 140 160 180 200 220 240 50 100 150 200 250 300 350
(10x diluted
?
In te nsity, cp s
In te nsity, cp s
4.0e4
600
3.0e4 extract) • More fragments to confirm
2.0e4
400 • Ability to compare to a library spectrum
MRM ratio =
200
1.0e4 0.50 The EPI data can help to de-complicate any
0.0
4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0
0
7 8 9 10 11 12
effects that the matrix might have on the MRM
Time, min Time, min ratio alone for better confirmation of positives.
Benefits of QTRAP® – Added confidence
1.6e4
7.7
10 ppb Metalaxyl6.6e7
160.1
sample
1.6e4
was
7.7
positive for
160.1
6.6e7Library spectrum
Standard 6.0e7
Metalaxyl
6.0e7 Metalaxyl
1.4e4 1.4e4
5.0e7 5.0e7
1.2e4 1.2e4
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
MRM ratio = 0.744.0e7 4.0e7
1.0e4 1.0e4
8000.0 3.0e7 145.1 192.2 RT
8000.0 was slightly off
3.0e7
(but 145.1 192.2not
6000.0
2.0e7
132.1 148.1
162.2 unusual
6000.0 in food matrices)
2.0e7
132.1 148.1
162.2
4000.0 220.3 4000.0 220.3
134.0 134.0
1.0e7 105.1 1.0e7 105.1
2000.0 6.2 248.3 280.3 2000.0 6.2 248.3 280.3
0.0
2 4 6 8 10 12 14 50 100 150 200 250 300 350 400
Am
0.0 I sure??
2 4 6 8 10 12 14 50 100 150 200 250 300 350 400
Time, min m/z, amu Time, min m/z, amu
XIC of +MRM (150 pairs): 280.2/... Max. 2100.0 cps. +EPI (280.20) Charge (+0) CE (3... Max. 3.3e5 cps. XIC of +MRM (150 pairs): 280.2/... Max. 2100.0 cps. +EPI (280.20) Charge (+0) CE (3... Max. 3.3e5 cps.
?
3.3e5 3.3e5
2000 2000
Metalaxyl
Unknown sample3.0e5
3.0e5
in sample?
2.5e5 spectrum 2.5e5
1500 (10x diluted 1500
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
Calculated FIT for Metalaxyl =
extract) 2.0e5 2.0e5
concentration = 23.6%
1000 220.3 1000 220.3
1.5e5 13.3μg/kg 1.5e5
192.4 192.4
500 1.0e5 148.3 500 1.0e5 148.3
MRM ratio =
5.0e4 5.0e4
0.72
134.0 202.3 134.0 202.3
0 0
2 4 6 8 10 12 14 50 100 150 200 250 300 350 400 2 4 6 8 10 12 14 50 100 150 200 250 300 350 400
Time, min m/z, amu Time, min m/z, amu
Benefits of QTRAP® – Added confidence
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
MRM ratio = 0.744.0e7 4.0e7
1.0e4 1.0e4
8000.0 3.0e7 145.1 192.2 8000.0 3.0e7 145.1 192.2
?
3.3e5 3.3e5
2000 2000
Metalaxyl
Unknown sample3.0e5
3.0e5
in sample? The EPI data can help
2.5e5 spectrum 2.5e5
1500 (10x diluted 1500 to de-complicate the
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
In te n sity, cp s
Calculated FIT for Metalaxyl =
extract) 2.0e5 2.0e5 results for better
concentration = 23.6%
1000
1.5e5
220.3
13.3μg/kg
1000
1.5e5
220.3 confirmation of
1.0e5
192.4
1.0e5
192.4
positives – or, in this
500 148.3 500 148.3
MRM ratio = case, confirmation that
5.0e4 5.0e4
0.72
134.0 202.3 134.0 202.3
this peak is not
0 0
2 4 6 8 10
Time, min
12 14 50 100 150 200 250 300 350 400
m/z, amu
2 4 6 8 10
Time, min
12 14 50 100 150 200 250 300 350 400
m/z, amu
Metalaxyl.
Thank you
68