Decision Trees

Representation of Concepts
Concept learning: conjunction of attributes
(Sunny AND Hot AND Humid AND Windy) +

Decision trees: disjunction of conjunction of attributes

(Sunny AND Normal) OR (Overcast) OR (Rain AND Weak) +
More powerful representation
OutdoorSport
Larger hypothesis space H
Can be represented as a tree
sunny
overcast
rain
Common form of decision
making in humans
Humidity
Wind
Yes
high

normal

strong

weak

No

Yes

No

Yes
2

Rectangle learning.
---------------

+++++++
++++++

-----

Conjunctions
(single rectangle)

-----------

-------------------------

-----

----------+++++++
++++++

+++++++
++++++
-----------

-----

-----

-----

Disjunctions of Conjunctions
(union of rectangles)

Training Examples
Day

Outlook

Temp

Humidity Wind

Tennis?

D1

Sunny

Hot

High

Weak

No

D2

Sunny

Hot

High

Strong

No

D3

Overcast

Hot

High

Weak

Yes

D4

Rain

Mild

High

Weak

Yes

D5

Rain

Cool

Normal

Weak

Yes

D6

Rain

Cool

Normal

Strong

No

D7

Overcast

Cool

Normal

Strong

Yes

D8

Sunny

Mild

High

Weak

No

D9

Sunny

Cool

Normal

Weak

Yes

D10

Rain

Mild

Normal

Weak

Yes

D11

Sunny

Mild

Normal

Strong

Yes

D12 Overcast

Mild

High

Strong

Yes

D13 Overcast

Hot

Normal

Weak

Yes

Decision Trees
Decision tree to represent learned target functions
Each internal node tests an attribute
Each branch corresponds to attribute value
Each leaf node assigns a classification
Outlook

Can be represented
by logical formulas

sunny

overcast

rain

Yes

Wind

Humidity
high

normal

strong

weak

No

Yes

No

Yes
5

Representation in decision trees

Example of representing rule in DTs:

if outlook = sunny AND humidity = normal

OR
if outlook = overcast
OR
if outlook = rain AND wind = weak
then playtennis

Applications of Decision Trees

Instances describable by a fixed set of attributes and their values
Target function is discrete valued
2-valued
N-valued
But can approximate continuous functions
Disjunctive hypothesis space
Possibly noisy training data
Errors, missing values,
Examples:

Equipment or medical diagnosis

Credit risk analysis
Calendar scheduling preferences

Attribute 2

Decision Trees

+ + + +
+ + + +
+ + + +
-

+ + + +
+ + + +
+ + + +

Given distribution
Of training instances
Draw axis parallel
Lines to separate the
Instances of each class

+ + + +
+ + + +
+ + + +

Attribute 1
8

Attribute 2

Decision Tree Structure

+ + + +
+ + + +
+ + + +
-

+ + + +
+ + + +
+ + + +

Draw axis parallel

Lines to separate the
Instances of each class

+ + + +
+ + + +
+ + + +

Attribute 1
9

Decision Tree Structure

Attribute 2

Decision leaf

+ + + +
+ + + +
+ + + +

30
-

* Alternate splits possible

+ + + +
+ + + +
+ + + +

Decision node
= condition
= box

+ + + +
+ + + +
+ + + +

= collection of satisfying
examples

Decision nodes (splits)

20

40

Attribute 1
10

Decision Tree Construction

Find the best structure
Given a training data set

11

Top-Down Construction
Start with empty tree
Main loop:

1.
2.
3.
4.
5.

Split the best decision attribute (A) for next node

Assign A as decision attribute for node
For each value of A, create new descendant of node
Sort training examples to leaf nodes
If training examples perfectly classified, STOP,
Else iterate over new leaf nodes
Grow tree just deep enough for perfect classification
If possible (or can approximate at chosen depth)
Which attribute is best?

12

Attribute 2

Best attribute to split?

+ + + +
+ + + +
+ + + +
-

+ + + +
+ + + +
+ + + +
+ + + +
+ + + +
+ + + +

Attribute 1
13

Attribute 2

Best attribute to split?

+ + + +
+ + + +
+ + + +
-

+ + + +
+ + + +
+ + + +
+ + + +
+ + + +
+ + + +

Attribute 1 > 40?

Attribute 1
14

Attribute 2

Best attribute to split?

+ + + +
+ + + +
+ + + +
-

+ + + +
+ + + +
+ + + +
+ + + +
+ + + +
+ + + +

Attribute 1 > 40?

Attribute 1
15

Which split to make next?

Pure box/node

Attribute 2

Mixed box/node
+ + + +
+ + + +
+ + + +
-

Attribute 1 > 20?

+ + + +
+ + + +
+ + + +

Already pure leaf

No further need to split

+ + + +
+ + + +
+ + + +

Attribute 1
16

Attribute 2

Which split to make next?

A2 > 30?

Already pure leaf

No further need to split
+ + + +
+ + + +
+ + + +
-

+ + + +
+ + + +
+ + + +
+ + + +
+ + + +
+ + + +

Attribute 1
17

Principle of Decision Tree Construction

Finally we want to form pure leaves
Correct classification

Greedy approach to reach correct classification

1. Initially treat the entire data set as a single box
2. For each box choose the spilt that reduces its impurity (in terms
of class labels) by the maximum amount
3. Split the box having highest reduction in impurity
4. Continue to Step 2
5. Stop when all boxes are pure

18

Choosing Best Attribute?

Consider examples, and
Which one is better?
29, 35 A1
t

29, 35
t

25, 5

4, 30

A2

14, 16

15, 19

Which is better?
29, 35 A1
t

21, 5

29, 35 A2
t

8, 30

18, 33

11, 2

19

Entropy

A measure for

uncertainty
purity
information content

Information theory: optimal length code assigns (logp) bits to

message having probability p

S is a sample of training examples

p+ is the proportion of positive examples in S

p is the proportion of negative examples in S

Entropy of S: average optimal number of bits to encode information

about certainty/uncertainty about S
EntropySplogpplogp plogpplogp

Can be generalized to more than two values

20

Entropy
Entropy can also be viewed as measuring
purity of S,
uncertainty in S,
information in S,
E.g.: values of entropy for p+=1, p+=0, p+=.5
Easy generalization to more than binary values
Sum over pi *(-log2 pi) , i=1,n
i is + or for binary
i varies from 1 to n in the general case

21

Choosing Best Attribute?

Consider examples (,and compute entropies:
Which one is better?
29, 35 A1 E(S)=0.993
0.650

0.522

25, 5

4, 30

29, 35
t

0.989

A2

E(S)=0.993
f

0.997

14, 16

15, 19

Which is better?
29, 35 A1
0.708

21, 5

E(S)=0.993
f

0.742

8, 30

E(S)=0.993

29 , 35 A2

0.937

18, 33

0.619

11, 2

22

Information Gain
Gain(S,A): reduction in entropy after choosing attr. A

Gain( S , A) Entropy ( S )

Sv
S

vValues ( A )

29, 35 A1 E(S)=0.993
0.650

25, 5

0.522

4, 30

0.708

0.989

21, 5

0.742

8, 30
Gain: 0.265

E(S)=0.993
f

0.997

14, 16

15, 19
Gain: 0.000

E(S)=0.993
f

A2

29 , 35

Gain: 0.395

29, 35 A1

Entropy ( S v )

E(S)=0.993

29 , 35 A2

0.937

0.619

11, 2

18, 33
Gain: 0.121

23

Gain function
Gain is measure of how much can
Reduce uncertainty
Value lies between 0,1
What is significance of
gain of 0?
example where have 50/50 split of +/- both before and

after discriminating on attributes values

gain of 1?
Example of going from perfect uncertainty to perfect
certainty after splitting example with predictive attribute

Find patterns in TEs relating to attribute

values
Move to locally minimal representation of TEs
24

Training Examples
Day

Outlook

Temp

Humidity Wind

Tennis?

D1

Sunny

Hot

High

Weak

No

D2

Sunny

Hot

High

Strong

No

D3

Overcast

Hot

High

Weak

Yes

D4

Rain

Mild

High

Weak

Yes

D5

Rain

Cool

Normal

Weak

Yes

D6

Rain

Cool

Normal

Strong

No

D7

Overcast

Cool

Normal

Strong

Yes

D8

Sunny

Mild

High

Weak

No

D9

Sunny

Cool

Normal

Weak

Yes

D10

Rain

Mild

Normal

Weak

Yes

D11

Sunny

Mild

Normal

Strong

Yes

D12 Overcast

Mild

High

Strong

Yes

D13 Overcast

Hot

Normal

Weak

Yes

Determine the Root Attribute

9+, 5

9+, 5

Humidity
High
3+, 4

Wind
Low
6+, 1

Weak
6+, 2

Strong
3+, 3

Gain (S, Humidity)

GainS, Wind

Gain (S, Outlook)

Gain (S, Temp)

26

Sort the Training Examples

9+, 5D1,,D14
Outlook
Sunny
D1,D2,D8,D9,D11
2+, 3

Overcast

D3,D7,D12,D13
4+, 0

Yes

Rain
D4,D5,D6,D10,D15
3+, 2
?

Ssunny= {D1,D2,D8,D9,D11}
Gain (Ssunny, Humidity) = .970
Gain (Ssunny, Temp) = .570
Gain (Ssunny, Wind) = .019

27

Final Decision Tree for Example

Outlook
Sunny

Rain
Overcast

Humidity
High
No

Yes
Normal
Yes

Wind
Strong
No

Weak
Yes

28

Hypothesis Space Search (ID3)

Hypothesis space (all possible trees) is complete!
Target function is included in there

29

Hypothesis Space Search in Decision Trees

Conduct a search of the space of decision trees which
can represent all possible discrete functions.
Goal: to find the best decision tree

Finding a minimal decision tree consistent with a set of data

is NP-hard.

Perform a greedy heuristic search: hill climbing without

backtracking
Statistics-based decisions using all data
30

Hypothesis Space Search by ID3

Hypothesis space is complete!

H is space of all finite DTs (all discrete functions)
Target function is included in there
Simple to complex hill-climbing search of H
Use of gain as hill-climbing function
Outputs a single hypothesis (which one?)
Cannot assess all hypotheses consistent with D (usually many)
Analogy to breadth first search

Examines all trees of given depth and chooses best

No backtracking
Locally optimal ...
Statistics-based search choices
Use all TEs at each step
Robust to noisy data
31

Restriction bias vs. Preference bias

Restriction bias (or Language bias)
Incomplete hypothesis space

Preference (or search) bias

Incomplete search strategy

Candidate Elimination has restriction bias

ID3 has preference bias
In most cases, we have both a restriction and a
preference bias.

32

Inductive Bias in ID3

Preference for short trees, and for those with high
information gain attributes near the root
Principle of Occam's razor
prefer the shortest hypothesis that fits the data

Justification
Smaller likelihood of a short hypothesis fitting the data
at random

Problems
Other ways to reduce random fits to data
Size of hypothesis based on the data representation
Minimum description length principle
33

Overfitting the Data

Learning a tree that classifies the training data perfectly may
not lead to the tree with the best generalization performance.
- There may be noise in the training data the tree is fitting
- The algorithm might be making decisions based on
very little data
A hypothesis h is said to overfit the training data if the is
another hypothesis, h, such that h has smaller error than h
on the training data but h has larger error on the test data than h.

On training
accuracy

On testing
Complexity of tree

34

Attribute 2

Overfitting

+ + + +
+ + - +
+ + + +
-

+ + + +
+ + + +
+ + + +

A very deep tree required

To fit just one odd training
example

+ + + +
+ + + +
+ + + +

Attribute 1
35

Attribute 2

When to stop splitting further?

+ + + +
+ + - +
+ + + +
-

+ + + +
+ + + +
+ + + +

A very deep tree required

To fit just one odd training
example

+ + + +
+ + + +
+ + + +

Attribute 1
36

Overfitting in Decision Trees

Consider adding noisy training example (should be +):
Day

Outlook

Temp

Humidity

Wind

Tennis?

D15

Sunny

Hot

Normal

Strong

No

What effect on earlier tree?

Outlook
Sunny
Humidity
High

Normal

Overcast
Yes

Rain
Wind
Strong

Weak

37

Overfitting - Example
Outlook

Noise or other
coincidental regularities
Sunny

Overcast

Rain

1,2,8,9,11
2+,3Humidity

3,7,12,13
4+,0Yes

4,5,6,10,14
3+,2Wind

High
No

Normal
Wind

Strong
No

Weak
Yes

Strong
No

Weak
Yes

38

Avoiding Overfitting
Two basic approaches
- Prepruning: Stop growing the tree at some point during
construction when it is determined that there is not enough
data to make reliable choices.
- Postpruning: Grow the full tree and then remove nodes
that seem not to have sufficient evidence. (more popular)
Methods for evaluating subtrees to prune:
- Cross-validation: Reserve hold-out set to evaluate utility (more popular)
- Statistical testing: Test if the observed regularity can be
dismissed as likely to be occur by chance
- Minimum Description Length: Is the additional complexity of
the hypothesis smaller than remembering the exceptions ?
This is related to the notion of regularization that we will see
in other contexts keep the hypothesis simple.
39

Reduced-Error Pruning
A post-pruning, cross validation approach
- Partition training data into grow set and validation set.
- Build a complete tree for the grow data
- Until accuracy on validation set decreases, do:
For each non-leaf node in the tree
Temporarily prune the tree below; replace it by majority vote.
Test the accuracy of the hypothesis on the validation set
Permanently prune the node with the greatest increase
in accuracy on the validation test.
Problem: Uses less data to construct the tree
Sometimes done at the rules level

General Strategy: Overfit and Simplify

40

Rule post-pruning
Allow tree to grow until best fit (allow overfitting)
Convert tree to equivalent set of rules
One rule per leaf node
Prune each rule independently of others
Remove various preconditions to improve
performance
Sort final rules into desired sequence for use

41

Example of rule post pruning

IF (Outlook = Sunny) ^ (Humidity = High)
THEN PlayTennis = No

IF (Outlook = Sunny) ^ (Humidity = Normal)

THEN PlayTennis = Yes

Outlook
Sunny
Humidity
High

Normal

Overcast
Yes

Rain
Wind
Strong

Weak

42

Extensions of basic algorithm

Continuous valued attributes
Attributes with many values
TEs with missing data
Attributes with associated costs
Other impurity measures
Regression tree

43

Continuous Valued Attributes

Create a discrete attribute from continuous variables
E.g., define critical Temperature = 82.5

Candidate thresholds
chosen by gain function
can have more than one threshold
typically where values change quickly
(80+90)/2

(48+60)/2

Temp
Tennis?

40
N

48
N

60
Y

72
Y

80
Y

90
N

44

Attributes with Many Values

Problem:
If attribute has many values, Gain will select it (why?)
E.g. of birthdates attribute
365 possible values
Likely to discriminate well on small sample
For sample of fixed size n, and attribute with N values, as N ->
infinity
ni/N -> 0
- pi*log pi -> 0 for all i and entropy -> 0
Hence gain approaches max value

45

Attributes with many values

Problem: Gain will select attribute with many values
One approach: use GainRatio instead

Gain( S , A)
GainRatio( S , A)
SplitInformation( S , A)
c

SplitInformation( S , A)
i 1

Si
S

log 2

Si
S

Entropy of the
partitioning
Penalizes
higher number
of partitions

where Si is the subset of S for which A has value vi

(example of Si/S = 1/N: SplitInformation = log N)
46

Unknown Attribute Values

What if some examples are missing values of attribute A?
Use training example anyway, sort through tree
if node n tests A, assign most common value of A among other
examples sorted to node n
assign most common value of A among other examples with same
target value
assign probability pi to each possible value vi of A

assign fraction pi of example to each descendant in tree

Classify test instances with missing values in same fashion

Used in C4.5
47

Attributes with Costs

Consider
medical diagnosis: BloodTest has cost $150, Pulse has a cost of $5.
robotics, Width-From-1ft has cost 23 sec., from 2 ft 10s.

How to learn a consistent tree with low expected cost?

Replace gain by
Tan and Schlimmer (1990)

Gain 2 ( S , A)
Cost ( A)
Nunez (1988)

2Gain ( S , A) 1

(
Cost
(
A
)

1
)
where determines importance of cost
48

Gini Index
Another sensible measure of impurity
(i and j are classes)

After applying attribute A, the resulting Gini index is

Gini can be interpreted as expected error rate

Gini Index

.
.

Attributes: color, border, dot

Classification: triangle, square

50

Gini Index for Color

.
.

red

Color?

green

.
yellow

.
.

51

Gain of Gini Index

52

Three Impurity Measures

A

Gain(A)

GainRatio(A)

GiniGain(A)

Color

0.247

0.156

0.058

Outline

0.152

0.152

0.046

Dot

0.048

0.049

0.015

53

Regression Tree
Similar to classification
Use a set of attributes to predict the value (instead
of a class label)
Instead of computing information gain, compute
the sum of squared errors
Partition the attribute space into a set of
rectangular subspaces, each with its own predictor
The simplest predictor is a constant value

54

Rectilinear Division
A regression tree is a piecewise constant function of the
input attributes
X2

X1 t1

r5
r2

X1 t3

X2 t2

r3

t2
r1

r2

r1

X2 t4

r3

r4

t1
r4

t3

X1

r5

55

Growing Regression Trees

To minimize the square error on the learning sample,
the prediction at a leaf is the average output of the
learning cases reaching that leaf
Impurity of a sample is defined by the variance of the
output in that sample:
I(LS)=vary|LS{y}=Ey|LS{(y-Ey|LS{y})2}

The best split is the one that reduces the most variance:
| LS a |
I ( LS , A) vary|LS { y}
vary|LS a { y}
a | LS |
56

Regression Tree Pruning

Exactly the same algorithms apply: pre-pruning
and post-pruning.
In post-pruning, the tree that minimizes the
squared error on VS is selected.
In practice, pruning is more important in
regression because full trees are much more
complex (often all objects have a different output
values and hence the full tree has as many leaves
as there are objects in the learning sample)

57

When Are Decision Trees Useful ?

Advantages
Very fast: can handle very large datasets with many
attributes
Flexible: several attribute types, classification and
regression problems, missing values
Interpretability: provide rules and attribute importance

Disadvantages
Instability of the trees (high variance)
Not always competitive with other algorithms in terms
of accuracy
58

History of Decision Tree Research

Hunt and colleagues in Psychology used full search decision
trees methods to model human concept learning in the 60s
Quinlan developed ID3, with the information gain heuristics
in the late 70s to learn expert systems from examples
Breiman, Friedmans and colleagues in statistics developed
CART (classification and regression trees simultaneously
A variety of improvements in the 80s: coping with noise,
continuous attributes, missing data, non-axis parallel etc.
Quinlans updated algorithm, C4.5 (1993) is commonly used (New:C5)
Boosting (or Bagging) over DTs is a good general purpose algorithm

59

Summary
Decision trees are practical for concept learning
Basic information measure and gain function for best first
search of space of DTs
ID3 procedure
search space is complete
Preference for shorter trees

Overfitting is an important issue with various solutions

Many variations and extensions possible

60

Software
In R:
Packages tree and rpart

C4.5:
http://www.cse.unwe.edu.au/~quinlan

Weka
http://www.cs.waikato.ac.nz/ml/weka

61