CHROMOSOME
STRUCTURE
AND
DNA
SEQUENCE
ORGANIZATION
HOW THE GENETIC
MATERIAL WAS
ORGANIZED AS IT
MAKES UP THE
GENOME?
Survey of chromosomes in virus and bacteria
Polytene and lampbrush chromosomes
= FERNANDO, Ciara Mae
Organization of eukaryotic chromosomes at
molecular level
= DIAZ, Suzenne
BACTERIA VS. VIRUS VS. EUKARYOTE
CHARACTER
BACTERIA
VIRUS
EUKARYOTE
DNA or RNA
DNA
Either
DNA
Single or
Double
Stranded
Double
Either
Double
Circular or
Linear
Circular
Either
Linear
Complexity
Less
Less
More
cProtein
HU and H1
None
Histone
VIRAL CHROMOSOMES
> DNA or RNA
>Single or Double Stranded
Circular (Closed
Loops) or Linear <
Bacteriophage = linear doublestranded DNA -> Infection -> circular
Bacteriophage T2 =
Linear double
stranded (no circling)
X174
bacteriophage =
single-stranded
DNA, circular
Polyoma Virus =
doublestranded DNA
BACTERIAL CHROMOSOMES
With HU and HI proteins similar to histones but
do not compact DNA
Escherichia coli large
circular chromosome,
DNA, Double stranded
Haemophilus inluenzae
DNA, Double stranded
GENETIC MATERIAL OF
REPRESENTATIVE VIRUSES AND
BACTERIA
NUCLEIC ACID
ORGANISM
VIRUSES
BACTERIA
TYPE
SS or DS LENGTH
Over-all size
X174
bacteriophage
DNA
SS
2.0
micro
0.025 x 0.025
micro
Tobacco
mosaic virus
RNA
SS
3.3
micro
0.30 x 0.02
micro
Bacteriophage
DNA
DS
17.0
micro
0.07 x 0.07
micro
Bacteriophage
T2
DNA
DS
52.0
micro
0.07 x 0.10
micro
Escherichia
coli
DNA
DS
832
micro
1.00 x 0.30
micro
Haemophilus
inluenzae
DNA
DS
1200
micro
2.00 x 0.5
micro
SUPERCOILING FOR COMPACTION
1)Polyoma Virus by
Jerome Vinigrad
2)E. coli
Topoisomerase I
and II
MOLECULAR ORGANIZATION AND
GENE PRODUCTS OF
MITOCHONDRIAL DNA
mtDNA Double stranded, closed circle
without chromosomal protein
Ciliated protozoans = single stranded
16,000-18,000 bp
ORGANISM
Varying Length
Animals
(Including
humans)
Yeast
(Saccharmoyces
cerevisiae)
BASE
PAIR
(bp)
16,000
18,000
75
Plant
(e.g. 367
Arabidopsis
thaliana)
(x) Introns, gene repetition and intergenic
spacer
Replication dependent on enzymes encoded
by nuclear DNA
H strand and L strand
MOLECULAR ORGANIZATION AND
GENE PRODUCTS OF
CHLOROPLAST DNA
cpDNA Uniform in size (100-225 kb)
Circular and double stranded; (x)
chromosomal protein
w/ Introns
SPECIALIZED CHROMOSOMES
Polytene and lampbrush large
unusual
Lampbrush
Polytene
POLYTENE CHROMOSOMES
Nuclei of interphase cells (Somatic cell)
Various tissue in larvae of flies, protozoans
and plants
First discovered by E.G. Balbiani
200-600 micrometers long
Linear series of alternating bands and
interbands
Chromomeres lateral condensation of
material along the axis of a chromosome
Unusual characteristics:
1) Paired Homologs
2) Large size and distinctiveness
) Puff visible manifestation of gene activity
(holds localized uncoiling)
LAMPBRUSH CHROMOSOMES
Resembles brushes to clean kerosene-lamp
chimney
1st discovered in shark oocyte Meotic
chromosomes
Prophase I (synapsed pair but extends length)
15 to 20 micrometers 500-800
micrometers
Chromomeres Lateral loop
Appearance
Adjacent loops Along one
More DNA than is needed