A Brief Primer on SIR Models in Economics
Alexander Karaivanov
Simon Fraser University
May 15, 2020
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A. Karaivanov SIR Models
What is a SIR model?
compartmental epidemiological model
population of size N passes over time t through three stages (more can be
added)
{ Susceptible, St
{ Infectious, It
{ Resolved, Rt (recovered or dead)
N = St + It + Rt for all t
initial condition: some infected, I0 > 0; the rest N I0 susceptible
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A. Karaivanov SIR Models
SIR Equations
S to I
dSt It
= St
dt N
I to R
dIt It
= St It
dt N
R (absorbing state)
dRt
= It
dt
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A. Karaivanov SIR Models
Key equation
dIt It
= St It (*)
dt N
for a susceptible agent i 2 St, the probability (rate) of being infected is
It
Prob(S ! I) =
N
captures
the probability/rate of infection conditional on contact with I person
the contact rate
{ some authors write = 0 Mt
It
is the probability/rate of contact with I person (uniform mixing)
N
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A. Karaivanov SIR Models
Key parameters
\infectiousness",
{ tricky, since product of biology (the chance of passing the infection upon
meeting I person) and behavior/policy (the contact rate)
\removal rate",
{ (mostly) biological { how fast people recover and how many infected die
(fraction , approx. 0.3%{0.6% for COVID-19)
1
{ measured in time (1= is the expected time to recovery/death, e.g., in
days)
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A. Karaivanov SIR Models
Dynamics
re-write SIR equation (*) as:
dIt It
= St It =
dt N
St
= It ( 1) (1)
N
dIt
the current number of infected It will grow, > 0 if
dt
St
>1 (2)
N
and decrease otherwise
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A. Karaivanov SIR Models
Basic reproduction number R0
R0 = expected new infections per unit of time generated by the rst infected
person, when S0 ' N
note the confusing notation with Rt (resolved)
from (1) we see that
R0 =
hence the importance of R0 = = being larger or smaller than 1
{ if R0 < 1 the epidemic never takes o , even at S0 = N , see (2)
also, note that the early (St ' N ) infection growth rate is
dIt
=It '
dt
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A. Karaivanov SIR Models
E ective reproduction number
as the epidemic evolves in time (assuming R0 > 1) there are less susceptibles
so, the expected new infections per I person and unit of time,
St
Rt
N
decrease over time
Rt is called the e ective reproduction number
note that if interventions (e.g., lockdown, distancing, testing and
quarantine) or behavioral responses a ect or St; It they a ect Rt too
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A. Karaivanov SIR Models
Herd immunity
when Rt = 1 (in ow into state I equals out ow from I) it is said that \herd
immunity" is reached (unstable steady state)
{ herd immunity occurs when
dIt
=0
dt
{ that is, when the remaining fraction of susceptibles is
St 1
=
N R0
{ or, equivalently, when the fraction of recovered or dead (who were infected
at some point) is
Rt 1
=1
N R0
Example: if R0 = 2:5, need 60% of the population to have been infected
to reach herd immunity
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A. Karaivanov SIR Models
Overshoot
Z
60% may sound bad enough but the total number of infected, Itdt (and
dead) continues to grow after herd immunity is reached
this is known as overshoot
Why?
dIt
dt< 0 after herd immunity is reached means only that there are fewer daily
new infections (It decreases) but It > 0 still
important role for isolating known infectious persons
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A. Karaivanov SIR Models
Extensions
\Exposed" state { incorporate incubation time (around 5 days for COVID-19)
{ SEIR model
\Quarantine" state { e.g., if an individual tests positive and is isolated from
contacts
It It
{ reduces in St
N N
\symptomatic" vs. \asymptomatic" infectious states
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A. Karaivanov SIR Models
SIR model and social networks
the standard SIR model assumes population-level, uniform mixing
abstracts from locality and the fact that many infections occur via social
contacts (broadly de ned)
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A. Karaivanov SIR Models
Network SIR model (NSIR)
represent the population by graph G (nodes with social links among them)
probability of a susceptible person i becoming infected at time t depends on
i's social contacts
P
j2CG (i) 1xjt =I
Prob(S ! I) =
#CG(i)
where CG(i) is the set of person i0s contacts (other nodes in G)
#CG(i) is node i's degree (number of contacts)
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A. Karaivanov SIR Models
E ective reproduction number in the NSIR model
note that the graph structure a ects the infection dynamics
in the standard SIR model, the probability of S person i meeting an I person
It
is uniform, 8i (\representative agent model")
N
in the network model this probability is heterogeneous and depends on i's
social contacts P
j2CG (i) 1xjt =I
it (G)
#CG(i)
can model `superspreaders', clusters, local outbreaks, etc.
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A. Karaivanov SIR Models
Policy interventions
It
essentially, trying to make smaller the term St
N
main bene t: \ atten the curve" It
{ reduce its peak (ICU capacity constraint)
{ reduce the overshoot and total deaths
cost: can prolong the epidemic duration
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A. Karaivanov SIR Models
Policy interventions
simplest, reduced-form way
{ time-dependent , e.g., t = (1 lt) (Atkeson, 2020; Moll, 2020)
equivalent to reducing the e ective reproduction number Rt
{ model \distancing" or \lockdown" as period of lower t
It
alternative way: reduce the rate of meetings with infectious persons St
N
{ e.g., (1 )St meet with (1 )It where is fraction locked down
(Alvarez et al. 2020)
{ di erent meeting technology (Acemoglu et al., 2020)
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A. Karaivanov SIR Models
Testing and quarantine
introduce state P (tested positive) which evolves as
dPt
= It Pt
dt
where is the testing rate per unit of time
Note: the \new cases" reported in the news every day correspond to Pt and
not to It (infectious)
Quarantine or (self-)isolation:
{ assume P agents are removed from meetings
{ or meet on a restricted-contacts graph GQ
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A. Karaivanov SIR Models
Contact tracing
key role for the graph G
tracking, testing and isolating infected social contacts of positive (P) agents
X
Prob(I ! P) = + 1xjt=P
j2CG (i)
where is the contact tracing rate
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A. Karaivanov SIR Models
Examples and discussion
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Source: Moll (2020)
Short and Tight Lockdown
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A. Karaivanov SIR Models
One-o or intermittent distancing
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Source: Karaivanov (2020)
A. Early short distancing D. Delayed short distancing
% population
% population
time (days) time (days)
B. Early medium long distancing E. Delayed medium long distancing
% population
% population
time (days) time (days)
C. Early long distancing F. Delayed long distancing
% population
% population
time (days) time (days)
Note: assumed initial infection rate 0.5%
Source: Karaivanov (2020)
G. (30)-30-(30) distancing H. (60)-30-(60) distancing
% population
% population
time (days) time (days)
I. (30)-90-(30) distancing J. (60)-90-(60) distancing
% population
% population
time (days) time (days)
K. (30)-120-(30) distancing L. (60)-120-(60) distancing
% population
% population
time (days) time (days)
Note: assumed initial infection rate 0.5%
A. Karaivanov SIR Models
Lockdown exit
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Source: Karaivanov (2020)
A. p=1, =70% lockdown
% population
infectious, It
lockdown period
B. p=0.5, =70% lockdown
% population
C. p=0, =30% lockdown
% population
D. p=0, =30% lockdown
% population
E. p=0, =70% lockdown
% population
F. p=0, =70% lockdown
% population
time (days)
Source: Karaivanov (2020)
Infectious, It
70% lockdown policy
no testing and contact tracing
2% testing only
2% testing and 5% contact tracing
5% testing only
% population
5% testing and 5% contact tracing
5% testing and 10% contact tracing
10% testing and 20% contact tracing
Cumulative deaths
% population
time (days)
A. Karaivanov SIR Models
Behavioral responses
assume timely information on positive cases is available
responses (A, B, C) based on individual circumstances { e.g., a contact who
tested positive
{ permanent reduction in contacts (upper bound)
{ temporary reduction (while a contact is positive)
responses D, E based on aggregate data (x new cases in the past y days)
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Source: Karaivanov (2020)
Behavioral responses A, B, C based on individual positive contacts
no behavioral response
behavioral response A
behavioral response B
Infectious I t, %
behavioral response C
Behavioral responses D based on aggregate new cases
2% testing, no behavioral response
2% testing, behavioral response D
Infectious I t, %
Behavioral responses E based on aggregate new cases
5% testing, no behavioral response
5% testing, behavioral response E
Infectious I t, %
time (days)
A. Karaivanov SIR Models
Impact on the economy?
requires (heroic) assumptions about
{ productivity in lockdown and/or when infectious (symptomatic vs.
asymptomatic)
{ value of life / years
current frontier working papers look at interventions and outcomes by
segments
{ by industry: e.g., retail vs. IT jobs are a ected very di erently
{ or, by population cohorts: elderly vs. work-age vs. school-age
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Economic activity index, Y t
no intervention
testing and quarantine
testing, quarantine and contact tracing
behavioral response E
time (days)
Economic activity index, Y t
no intervention
distancing D
distancing J
70% lockdown
time (days)
Source: Moll (2020)
Some Unpleasant Lockdown Arithmetic
• If lockdowns only option, how long do effective ones need to last?
• Key: need to reach herd immunity. So: how long to reach that?
• Optimistically assume perm immunity, R0 ↓ to 2 (better hygiene...)
herd immunity threshold = 1 − 1/R0 = 50%
• Simple back of envelope calculation for U.S. Assumptions:
1. 10% have had disease ⇒ need additional 40% ≈ 100 million
2. lockdown suppresses Ret to 1, infections rolled over (sl 40-41)
(Ret = 1 close to current US estimate)
3. 200,000 new infections per day (current official count ≈ 30,000)
• ⇒ need some sort of lockdown / control for
100 million
= 500 days
200, 000
• Note: optimistic calculation assuming low R0 , permanent immunity
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A. Karaivanov SIR Models
References
Acemoglu, D., V. Chernozhukov, I. Werning and M. Whinston (2020), \A Multi-Risk SIR Model with Optimally Targeted Lockdown"
Alvarez, F., D. Argente and F. Lippi (2020), \A Simple Planning Problem for COVID-19 Lockdown"
Atkeson, A. (2020), \What will be the Economic Impact of COVID-19 in the US? Rough Estimates of Disease Scenarios"
Azzimonti, M., A. Fogli, F. Perri and M. Ponder (2020), \Social Distance Policies in Network Cities"
Berger, D., K. Herkenho and S. Mongey (2020), \An SEIR Infectious Disease Model with Testing and Conditional Quarantine"
Chari, V.V., R. Kirpalani and C. Phelan (2020), \The Hammer and the Scalpel: On the Economics of Indiscriminate versus Targeted
Isolation Policies during Pandemics"
Farboodi, M., G. Jarosch and R. Shimer (2020), \Internal and External E ects of Social Distancing in a Pandemic"
Fernandez-Villaverde, J. and C. Jones (2020), \Estimating and Simulating a SIRD Model of COVID-19 for Many Countries, States, and
Cities"
Karaivanov, A. (2020), \A Social Network Model of COVID-19", http:[Link]~akaraivanKaraivanov [Link]
Kermack, W. and A. McKendrick (1927), \A contribution to the mathematical theory of epidemics", Proceedings of the Royal Society
A, 115(772), p.700-721
Kuchler, T., D. Russel and J. Stroebel (2020), \The geographic spread of COVID-19 correlates with structure of social networks as
measured by Facebook"
Moll, B. (2020), \Lockdowns in SIR Models", slides
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