Cahpter 1 Bishop
Cahpter 1 Bishop
CHAPTER OUTLINE
Units of Measure Laboratory Mathematics and Calculations
Reagents Significant Figures
Chemicals Logarithms
Reference Materials Concentration
Water Specifications Dilutions
Solution Properties Simple Dilutions
Concentration Serial Dilutions
Colligative Properties Water of Hydration
Redox Potential Graphing and Beer’s Law
Conductivity Specimen Collection and Handling
pH and Buffers Types of Samples
Laboratory Equipment Sample Processing
Heating Units Sample Variables
Glassware and Plasticware Chain of Custody
Desiccators and Desiccants Electronic and Paper Reporting of Results
Balances References
Centrifuges
KEY TERMS
Analyte Density Hygroscopic
Anhydrous Desiccant Icterus
Arterial blood Dilution International unit
Beer’s law Distilled water Ionic strength
Buffer Equivalent weight Linearity
Calibration Erlenmeyer flasks Lipemia
Centrifugation Filtration Molality
Cerebrospinal fluid (CSF) Graduated cylinder Molarity
Colligative property Griffin Beaker Normality
Conductivity Hemolysis One-point calibration
Deionized water Henderson-Hasselbalch equation Osmotic pressure
Delta absorbance Hydrate Oxidized
2
Basic Principles and Practices of Clinical Chemistry 3
CHAPTER OBJECTIVES
Upon completion of this chapter, the clinical laboratorian • List and describe the types of thermometers used in
should be able to do the following: the clinical laboratory.
• Classify the type of pipette when given an actual
• Convert results from one unit format to another using
pipette or its description.
the SI and traditional systems.
• Demonstrate the proper use of a measuring and
• Describe the classifications used for reagent-grade
volumetric pipette.
water.
• Describe two ways to calibrate a pipetting device.
• Identify the varying chemical grades used in reagent
• Define a desiccant and discuss how it is used in the
preparation and indicate their correct use.
clinical laboratory.
• Define primary standard and standard reference
• Describe how to properly care for and balance a
materials.
centrifuge.
• Describe the following terms that are associated
• Correctly perform the laboratory mathematical
with solutions and, when appropriate, provide the
calculations provided in this chapter.
respective units: percent, molarity, normality, molality,
• Identify and describe the types of samples used in
saturation, colligative properties, redox potential, and
clinical chemistry.
conductivity.
• Outline the general steps for processing blood
• Compare and contrast osmolarity and osmolality.
samples.
• Define a buffer and give the formula for pH and pK
• Apply Beer’s law to determine the concentration
calculations.
of a sample when the absorbance or change in
• Use the Henderson-Hasselbalch equation to
absorbance is provided.
determine the missing variable when given either the
• Identify the preanalytic variables that can adversely
pK and pH or the pK and concentration of the weak
affect laboratory results as presented in this chapter.
acid and its conjugate base.
hazards and precautions needed for the safe use, Water Specifications8
storage, and disposal of any chemical. Manufacturers
Water is the most frequently used reagent in the
are required to provide a Safety Data Sheet (SDS). A
laboratory. Tap water is unsuitable for laboratory
copy of the SDS must be readily available to ensure
applications. Most procedures, including reagent
the safety of laboratorians.
and control preparation, require water that has been
substantially purified, known as reagent-grade
Reference Materials water. There are various water purification methods
Unlike other areas of chemistry, clinical chemistry is including distillation, ion exchange, reverse osmo-
involved in the analysis of biochemical by-products sis, ultrafiltration, ultraviolet light, sterilization, and
found in biological fluids, such as serum, plasma, or ozone treatment. According to the Clinical and Lab-
urine. For this reason, traditionally defined standards oratory Standards Institute (CLSI), reagent-grade
used in analytical chemistry do not readily apply in water is classified into one of six categories based
clinical chemistry. on the specifications needed for its use rather than
A primary standard is a highly purified chem- the method of purification or preparation.9 These
ical that can be measured directly to have an exact categories include clinical laboratory reagent water
known concentration and purity. The ACS has purity (CLRW), special reagent water (SRW), instrument
tolerances for primary standards; because most bio- feed water, water supplied by method manufacturer,
logic constituents are unavailable within these toler- autoclave and wash water, and commercially bottled
ance limitations, the National Institute of Standards purified water. Each category has a specific accept-
and Technology (NIST) has certified standard able limit. The College of American Pathologists
reference materials (SRMs) that are used in place requires laboratories to define the specific type of
of ACS primary standard materials.5–7 water required for each of its testing procedures and
These SRMs are assigned a value after analysis requires water quality testing at least annually. Water
using state-of-the-art methods and equipment. The quality testing routinely includes monitoring micro-
chemical composition of these substances is then bial colony-forming units/mL and may also include
certified; however, they may not have the purity of a other parameters.
primary standard. Because each substance has been Distilled water has been purified to remove
characterized for certain chemical or physical prop- almost all organic materials, using a technique of
erties, it can be used in place of an ACS primary distillation where water is boiled and vaporized.
standard in clinical work and is often used to verify Many impurities do not rise in the water vapor and
alibration or accuracy/bias assessments. Many
c will remain in the boiling apparatus so that the water
manufacturers use a NIST SRM when producing cal- collected after condensation has less contamination.
ibrator and standard materials. These materials are Water may be distilled more than once, with each
considered “traceable to NIST” and may meet certain distillation cycle removing additional impurities.
accreditation requirements. Standard reference Ultrafiltration and nanofiltration, like distillation,
materials are used for l inearity studies to determine are excellent in removing particulate matter, micro-
the relationship between the standard’s concentra- organisms, and any pyrogens or endotoxins.
tion and the instrument result. Linearity studies Deionized water has some or all ions removed,
are required when a new test or new test method- although organic material may still be present, so it is
ology is introduced. There are SRMs for a number neither pure nor sterile. Generally, deionized water is
of routine analytes, hormones, drugs, and blood purified from previously treated water, such as prefil-
gases, with others being added.5 Calibration of an tered or distilled water. Deionized water is produced
instrument is a process that pairs an analytical sig- using either an anion- or a cation-exchange resin,
nal with a concentration value of an analyte. When followed by replacement of the removed ions with
performing a calibration, a series of calibrators with hydroxyl or hydrogen ions. A combination of sev-
known concentrations of a specific analyte are used. eral ion-exchange resins will produce different grades
The instrument is programmed with the known of deionized water. A two-bed system uses an anion
concentrations and will adjust the analytic signal resin followed by a cation resin. The different resins
to match the given concentration. Calibrators can may be in separate columns or in the same column.
be purchased as a kit or made by diluting a known This process is excellent at removing dissolved ion-
stock solution. ized solids and dissolved gases.
8 Chapter 1 Basic Principles and Practices of Clinical Chemistry
Reverse osmosis is a process that uses pressure This one measurement does not suffice for determi-
to force water through a semipermeable membrane, nation of true water purity because a nonionic con-
producing a filtered product. Reverse osmosis may be taminant may be present that will have little effect on
used for the pretreatment of water, however, it does resistance. Reagent water meeting specifications from
not remove dissolved gases. other organizations, such as the American Society for
Filtration can remove particulate matter from Testing and Materials (ASTM), may not be equivalent
municipal water supplies before any additional treat- to those established by the CLSI, so care should be
ments. Filtration cartridges can be composed of glass, taken to meet the assay procedural requirements for
cotton, or activated charcoal, which removes organic water type.
materials and chlorine. Some have submicron filters
(≤0.2 µm), which remove any substances larger than Solution Properties
the filter’s pores, including bacteria. The use of these fil-
In clinical chemistry, substances found in biologic flu-
ters depends on the quality of the municipal water and
ids, including serum, plasma, urine, and spinal fluid,
the other purification methods used. For example, hard
are quantified. A substance that is dissolved in a liq-
water (containing calcium, iron, and other dissolved
uid is called a solute; a biologic solute is also known
elements) may require prefiltration with a glass or cot-
as an analyte. The liquid in which the solute is dis-
ton filter rather than activated charcoal or submicron
solved—for example, a biologic fluid—is the solvent.
filters, which quickly become clogged and are expensive
Together, solute and solvent represent a solution. Any
to use. The submicron filter may be better suited after
chemical or biologic solution can be described by its
distillation, deionization, or reverse osmosis treatment.
basic properties, including concentration, saturation,
Ultraviolet oxidation, which removes some trace
colligative properties, redox potential, conductivity,
organic material or sterilization processes at specific
density, pH, and ionic strength.
wavelengths, can destroy bacteria when used as part
of a system but may leave behind some residual prod-
ucts. This technique is often followed by other purifi- Concentration
cation processes. The analyte concentration in solution can be expressed
Reagent-grade water can be obtained by initially in many ways. Concentration is commonly expressed
filtering to remove particulate matter, followed by as percent solution, molarity, molality, or normality. These
reverse osmosis, deionization, and a 0.2-µm filter or are non-SI units, however; the SI unit for the amount
more restrictive filtration process. Autoclave wash of a substance is the mole. Examples of concentration
water is acceptable for glassware washing but not for calculations are provided later in this chapter.
analysis or reagent preparation. SRW is used for spe- Percent solution is expressed as the amount of
cific techniques like the HPLC, molecular diagnostics, solute per 100 total units of solution. Three expres-
or mass spectrophotometry, which may require spe- sions of percent solutions are weight per weight
cific parameters for the analysis. All SRW should meet (w/w), volume per volume (v/v), and weight per vol-
CLRW standards and, depending on the application, ume (w/v). Weight per weight (% w/w) refers to the
CLRW should be stored in a manner that reduces any number of grams of solute per 100 g of solution. Vol-
chemical or bacterial contamination and for short ume per volume (% v/v) is used for liquid solutes and
periods. gives the milliliters of solute in 100 mL of solution.
Testing procedures to determine the quality of For v/v solutions, it is recommended that grams per
reagent-grade water include measurements of resis- deciliter (g/dL) be used instead of % v/v. Weight per
tance, pH, colony counts on selective and nonselective volume (% w/v) is the most commonly used percent
media for the detection of bacterial contamination, solution in the clinical laboratory and is defined as
chlorine, ammonia, nitrate or nitrite, iron, hardness, the number of grams of solute in 100 mL of solution.
phosphate, sodium, silica, carbon dioxide, chemical Weight per volume is not the same as molarity, and
oxygen demand, and metal detection. Some accred- care must be taken to not confuse the two. Examples
itation agencies10 recommend that laboratories docu- of percent solution calculations can be found later in
ment culture growth, pH, and specific resistance on this chapter.
water used in reagent preparation. Resistance is mea- Molarity (M) is expressed as the number of moles
sured because pure water, devoid of ions, is a poor per 1 L of solution. One mole of a substance equals
conductor of electricity and has increased resistance. its gram molecular weight (gmw), so the customary
The relationship of water purity to resistance is lin- units of molarity (M) are moles/liter. The SI represen-
ear; generally, as purity increases, so does resistance. tation for the traditional molar concentration is moles
Reagents 9
of solute per volume of solution, with the volume of A dilute solution is one in which there is relatively little
the solution given in liters. The SI expression for con- solute or one that has a lower solute concentration
centration should be represented as moles per liter per volume of solvent than the original, such as when
(mol/L), millimoles per liter (mmol/L), micromoles making a dilution. In contrast, a concentrated solution
per liter (μmol/L), or nanomoles per liter (nmol/L). has a large quantity of solute in solution. A solution in
The common concentration term molarity is not an SI which there is an excess of undissolved solute particles
unit for concentration. Molarity depends on volume, can be referred to as a saturated solution. As the name
and any significant physical changes that influence implies, a supersaturated solution has an even greater
volume, such as changes in temperature and pressure, concentration of undissolved solute particles than a
will also influence molarity. Calculations can be found saturated solution of the same substance. Because of
in the Laboratory Mathematics and Calculations sec- the greater concentration of solute particles, a super-
tion of this chapter. saturated solution is thermodynamically unstable.
Molality (m) represents the amount of solute The addition of a crystal of solute or mechanical agita-
per 1 kg of solvent. Molality is sometimes confused tion disturbs the supersaturated solution, resulting in
with molarity; however, it can be easily distinguished crystallization of any excess material out of solution.
because molality is always expressed in terms of moles An example is when measuring serum osmolality by
per kilogram (weight per weight) and describes moles freezing point depression.
per 1000 g (1 kg) of solvent. Note that the common
abbreviation (m) for molality is a lowercase “m,” while
the uppercase “M” refers to molarity. Molality is not Colligative Properties
influenced by temperature or pressure because it is Colligative properties are those properties related
based on mass rather than volume. to the number of solute particles per solvent mol-
Normality is the least likely of the four concen- ecules, not on the type of particles present. The
tration expressions to be encountered in clinical lab- behavior of particles or solutes in solution demon-
oratories, but it is often used in chemical titrations strates four properties: osmotic pressure, vapor
and chemical reagent classification. It is defined as the pressure, freezing point, and boiling point. These
number of gram equivalent weights per 1 L of solu- are called c olligative properties. Osmotic pressure
tion. An equivalent weight is equal to the gmw of is the pressure that opposes osmosis when a solvent
a substance divided by its valence. The valence is flows through a semipermeable membrane to estab-
the number of units that can combine with or replace lish equilibrium between compartments of differing
1 mole of hydrogen ions for acids and hydroxyl ions concentration. Vapor pressure is the pressure exerted
for bases and the number of electrons exchanged in by the vapor when the liquid solvent is in equilib-
oxidation–reduction reactions. Normality is always
rium with the vapor. Freezing point is the temperature
equal to or greater than the molarity of the compound. at which the first crystal (solid) of solvent forms in
Calculations can be found later in this chapter. Nor- equilibrium with the solution. Boiling point is the tem-
mality was previously used for reporting electrolyte perature at which the vapor pressure of the solvent
values, expressed as milliequivalents per liter (mEq/L); reaches atmospheric pressure (usually 1 atmosphere).
however, this convention has been replaced with mil- The osmotic pressure of a dilute solution is
limoles per liter (mmol/L). The College of American directly proportional to the concentration of the
Pathologists (CAP) currently requires chloride to molecules in solution. The expression for concen-
be reported in mmol/L. Because the four main elec- tration is the osmole. One osmole of a substance
trolytes, Na+, K+, CO2– (HCO3–), and Cl–, all have a equals the molarity or molality multiplied by the
valence of 1, the concentration reported will remain number of particles, not the kind of particle, at dis-
the same whether the unit is mEq/L or mmol/L. sociation. If molarity is used, the resulting expres-
Solution saturation gives little specific informa- sion would be termed osmolarity; if molality is used,
tion about the concentration of solutes in a solution. the expression changes to osmolality. Osmolality is
A solution is considered saturated when no more sol- preferred since it depends on the weight rather than
vent can be dissolved in the solution. Temperature, as volume and is not readily influenced by temperature
well as the presence of other ions, can influence the and pressure changes. When a solute is dissolved in
solubility constant for a solute in a given solution and a solvent, the colligative properties change in a pre-
thus affect the saturation. Routine terms in the clin- dictable manner for each osmole of substance pres-
ical laboratory that describe the extent of saturation ent. In the clinical setting, freezing point and vapor
are dilute, concentrated, saturated, and supersaturated. pressure depression can be measured as a function
10 Chapter 1 Basic Principles and Practices of Clinical Chemistry
of osmolality. Freezing point is preferred since vapor weak acid or base solution (like a buffer) tends to be
pressure measurements can give inaccurate readings very small, meaning little dissociation occurs.
when some substances, such as alcohols, are present The dissociation of acetic acid (CH3COOH), a
in the samples. weak acid, can be illustrated as follows:
HA A– + H+
Redox Potential (Eq. 1.2)
Redox potential, or oxidation–reduction potential, is a CH 3 COOH CH 3 COO– + H+
measure of the ability of a solution to accept or donate
HA = weak acid, A− = conjugate base, H+ = hydro-
electrons. Substances that donate electrons are called
gen ions, [] = concentration of item in the bracket.
reducing agents; those that accept electrons are
Sometimes, the conjugate base (A−) will be referred
considered oxidizing agents. The mnemonic—LEO
to as a “salt” since, physiologically, it will be associated
(lose electrons oxidized) the lion says GER (gain
with some type of cation, such as sodium (Na+).
electrons reduced)—may prove useful when trying
The dissociation constant, Ka, for a weak acid may
to recall the relationship between reducing/oxidizing
be calculated using the following equation:
agents.
A– H+
Ka = (Eq. 1.3)
Conductivity HA
Conductivity is a measure of how well electricity
passes through a solution. A solution’s conductivity Rearrangement of this equation reveals
quality depends principally on the number of respec-
tive charges of the ions present. Resistivity, the recip- HA (Eq. 1.4)
H+ = K a ×
rocal of conductivity, is a measure of a substance’s A+
resistance to the passage of electrical current. The
primary application of resistivity in the clinical labo- Taking the log of each quantity and then multiplying
ratory is for assessing the purity of water. Resistivity by minus 1 (−1), the equation can be rewritten as
(resistance) is expressed as ohms and conductivity is
HA
expressed as ohms−1. – log H+ = – log K a × – log (Eq. 1.5)
A–
pH and Buffers By convention, lowercase p means “negative log of”;
Buffers are weak acids or bases and their related therefore, –log[H+] may be written as pH, and −Ka
salts that minimize changes in the hydrogen ion may be written as pKa. The equation now becomes
concentration. Hydrogen ion concentration is often
HA
expressed as pH. A lowercase p in front of c ertain pH = pK a – log (Eq. 1.6)
letters or abbreviations operationally means the A–
“negative logarithm of” or “inverse log of” that
substance. In keeping with this convention, the
Eliminating the minus sign in front of the log of the
term pH represents the negative or inverse log of HA
the hydrogen ion concentration. Mathematically, pH quantity results in an equation known as the
A–
is expressed as
Henderson-Hasselbalch equation, which mathe-
1 matically describes the dissociation characteristics of
pH = log weak acids (pKa) and bases (pKb) and the effect on pH:
H+ (Eq. 1.1)
pH = – log H+ A–
pH = pK a + log (Eq. 1.7)
HA
where [H+] equals the concentration of hydrogen
ions in moles per liter (M). The pH scale ranges from When the ratio of [A−] to [HA] is 1, the pH equals the
0 to 14 and is a convenient way to express hydrogen pK and the buffer has its greatest buffering capacity.
ion concentration. The dissociation constant Ka, and therefore the pKa,
Unlike a strong acid or base, which dissociates remains the same for a given substance. Any changes
almost completely, the dissociation constant for a in pH are solely due to the ratio of conjugate base [A−]
Laboratory Equipment 11
concentration to weak acid [HA] concentration. Refer enzyme determinations, require precise temperature
to Chapter 12, Blood Gases, pH, and Buffer Systems, for control, whereas others work well over a wide range
more information. of temperatures. Reactions that are temperature
Ionic strength is another important aspect of dependent use some type of heating/cooling cell,
buffers, particularly in separation techniques. Ionic heating/cooling block, or water/ice bath to provide
strength is the concentration or activity of ions in a the correct temperature environment. Laboratory
solution or buffer. Increasing ionic strength increases refrigerator temperatures are often critical and need
the ionic cloud surrounding a compound and periodic verification. Thermometers can be an inte-
decreases the rate of particle migration. It can also gral part of an instrument or need to be placed in
promote compound dissociation into ions effectively the device for temperature maintenance and mon-
increasing the solubility of some salts, along with itoring. Several types of temperature devices are
changes in current, which can also affect electropho- currently used in the clinical laboratory, including
retic separation. liquid-in-glass and electronic (thermistor) devices.
Regardless of which type is being used, all tempera-
ture-reading devices must be calibrated for accu-
Laboratory Equipment racy. Liquid-in-glass thermometers use a colored
In today’s clinical chemistry laboratory, there are many liquid (red or other colored material), encased in
different types of equipment in use. Most manual plastic or glass, measuring temperatures between
techniques have been replaced by automation, but it 20°C and 400°C. Visual inspection of the liquid-
is still necessary for the laboratorian to be knowledge- in-glass thermometer should reveal a continuous
able in the operation and use of common laboratory line of liquid, free from separation or bubbles. If
equipment. The following is a brief discussion of the separation or bubbles are present, then replace the
composition and general use of common equipment thermometer.
found in a clinical chemistry laboratory, including Liquid-in-glass thermometers should be cal-
heating units, thermometers, pipettes, flasks, beakers, ibrated against a NIST-certified or NIST-traceable
balances, and centrifuges. thermometer for critical laboratory applications.11
NIST has an SRM thermometer with various calibra-
tion points (0°C, 25°C, 30°C, and 37°C) for use with
Heating Units
liquid-in-glass thermometers. Gallium, another SRM,
Heat blocks and water baths are common heating has a known melting point and can also be used for
units within the laboratory. The temperature of these thermometer verification.
heating units must be monitored daily when in use. As automation advances and miniaturizes,
The predominant practice for temperature measure- the need for an accurate, fast-reading electronic
ment uses the Celsius (°C) scale; however, Fahr- thermometer (thermistor) has increased and is
enheit (°F) and Kelvin (°K) scales are also used.11 now routinely incorporated in many devices. The
The SI designation for temperature is the Kelvin scale. advantages of a thermistor over the more tradi-
Table 1.3 gives the conversion formulas between
tional liquid-in-glass thermometers are size and
Fahrenheit and Celsius scales, and Appendix C (found millisecond response time. Similar to the liquid-in-
in the Navigate 2 digital component) lists the various
glass thermometers, the thermistor can be calibrated
conversion formulas.
against an SRM thermometer.
All analytic reactions occur at an optimal tem-
perature. Some laboratory procedures, such as
Glassware and Plasticware
Until recently, laboratory supplies (e.g., pipettes,
Table 1.3 Common Temperature Conversions flasks, beakers) consisted of some type of glass
Celsius (Centigrade) °C (9/5) + 32 (multiply Celsius and could be correctly termed glassware. As plastic
to Fahrenheit temperature by 9; divide the material was refined and made available to manu-
answer by 5, then add 32) facturers, plastic has been increasingly used to make
Fahrenheit to Celsius (°F − 32)5/9 (subtract 32 and laboratory supplies. A brief summary of the types
(Centigrade) divide the answer by 9; then and uses of glass and plastic commonly seen today
multiply that answer by 5) in laboratories can be found in the Navigate 2 digital
© Jones & Bartlett Learning. component. Regardless of design, most laboratory
supplies must satisfy certain tolerances of accuracy
12 Chapter 1 Basic Principles and Practices of Clinical Chemistry
and fall into two classes of precision tolerance, either rinses with appropriate grade water is recommended.
Class A or Class B as given by ASTM.12,13 Those that Check the pH of the final rinse water and compare it
satisfy Class A ASTM precision criteria are stamped with the initial pH of the prerinse water. Detergent-
with the letter “A” on the glassware and are pre- contaminated water will have a more alkaline pH as
ferred for laboratory applications. Class B glassware compared with the pH of the prerinse water. Visual
generally have twice the tolerance limits of Class A, inspection should reveal spotless vessel walls. Any
even if they appear identical, and are often found biologically contaminated labware should be dis-
in student laboratories where durability is needed. posed of according to the precautions followed by
Vessels holding or transferring liquid are designed the laboratory.
either to contain (TC) or to deliver (TD) a specified Some determinations, such as those used in
volume. The major difference is that TC devices assessing heavy metals or assays associated with
do not deliver the volume measured when the liq- molecular testing, require scrupulously clean or dis-
uid is transferred into a container, whereas the TD posable glassware. Other applications may require
designation means that the labware will deliver the plastic rather than glass because glass can absorb
amount measured. metal ions. It is suggested that disposable glass and
Glassware used in the clinical laboratory usually plastic be used whenever possible.
fall into one of the following categories: Kimax/Pyrex Dirty reusable pipettes should be placed, with
(borosilicate), Corex (aluminosilicate), high silica, the pipette tips up, immediately in a specific pipette
Vycor (acid and alkali resistant), low actinic (amber soaking/washing/drying container. This container
colored), or flint (soda lime) glass used for dispos- should have soapy water high enough to cover
able material.14 Glassware routinely used in clinical the entire pipette. For each final water rinse, fresh
chemistry should consist of high thermal borosilicate reagent-grade water should be used; if possible,
or aluminosilicate glass. The manufacturer is the best designate a pipette container for final rinses only.
source of information about specific uses, limitations, Cleaning brushes are available to fit almost any size
and accuracy specifications for glassware. glassware and are recommended for any articles that
Plasticware is beginning to replace glassware are washed routinely.
in the laboratory setting; high resistance to corro- Although plastic material is often easier to clean
sion and breakage, as well as varying flexibility, has because of its nonwettable surface, it may not be
made plasticware appealing. Relatively inexpensive, it appropriate for some applications involving organic
allows most items to be completely disposable after solvents or autoclaving. Brushes or harsh abra-
each use. The major types of resins frequently used sive cleaners should not be used on plasticware.
in the clinical chemistry laboratory are polystyrene, Many initial cleaning procedures, described in
polyethylene, polypropylene, Tygon, Teflon, polycar- Appendix J (found in the Navigate 2 digital com-
bonate, and polyvinyl chloride. Again, the individual ponent), can be adapted for plasticware. Ultrasonic
manufacturer is the best source of information con- cleaners can help remove debris coating the sur-
cerning the proper use and limitations of any plastic faces of glass or p
lasticware. Properly cleaned lab-
material. oratory glass and plasticware should be completely
In most laboratories, glass or plastic that is in dried before using.
direct contact with biohazardous material is usu-
ally disposable. If not, it must be decontaminated
according to appropriate protocols. Should the need Laboratory Glassware
arise, cleaning of glass or plastic may require special Flasks, beakers, and graduated cylinders are used to
techniques. Immediately rinsing glass or plastic sup- hold solutions. Volumetric and Erlenmeyer flasks are
plies after use, followed by washing with a detergent two types of containers in general use in the clinical
designed for cleaning laboratory supplies and several laboratory.
distilled water rinses, may be sufficient. Presoaking A volumetric flask is calibrated to hold one exact
glassware in soapy water is highly recommended volume of liquid (TC). The flask has a round, lower
whenever immediate cleaning is impractical. Many portion with a flat bottom and a long, thin neck with
laboratories use automatic dishwashers and dry- an etched calibration line. Volumetric flasks are used
ers for cleaning. Detergents and temperature levels to bring a given reagent to its final volume with the
should be compatible with the material and the man- recommended diluent. When bringing the bottom of
ufacturer’s recommendations. To ensure that all deter- the meniscus to the calibration mark, a pipette should
gent has been removed from the labware, m ultiple be used for adding the final drops of diluent to ensure
Laboratory Equipment 13
maximum control is maintained and the calibration Table 1.4 Pipette Classification
line is not missed.
Erlenmeyer flasks and Griffin beakers are I. Design
designed to hold different volumes rather than one A. To contain (TC)
exact amount. Because Erlenmeyer flasks and Griffin B. To deliver (TD)
beakers are often used in reagent preparation, flask II. Drainage characteristics
size, chemical inertness, and thermal stability should A. Blowout
be considered. The Erlenmeyer flask has a wide bot- B. Self-draining
tom that gradually evolves into a smaller, short neck.
III. Type
The Griffin beaker has a flat bottom, straight sides,
A. Measuring or graduated
and an opening as wide as the flat base, with a small
spout in the lip. 1. Serologic
2. Mohr
Graduated cylinders are long, cylindrical tubes
3. Bacteriologic
usually held upright by an octagonal or circular base. 4. Ball, Kolmer, or Kahn
The cylinder has horizontal calibration marks and is 5. Micropipette
used to measure volumes of liquids. Graduated cylin- B. Transfer
ders do not have the accuracy of volumetric labware.
1. Volumetric
The sizes routinely used are 10, 25, 50, 100, 500, 2. Ostwald-Folin
1000, and 2000 mL. 3. Pasteur pipettes
All laboratory glassware used for critical mea- 4. Automatic macropipettes or micropipettes
surements should be Class A whenever possible to
© Jones & Bartlett Learning.
maximize accuracy and precision and thus decrease
calibration time (Figure 1.1 illustrates representative
laboratory glassware).
articular volume of liquid. The major difference is
p
Pipettes the amount of liquid needed to wet the interior surface
Pipettes are a type of laboratory equipment used to of the pipette and the amount of any residual liquid
transfer liquids; they may be reusable or disposable. left in the pipette tip. Most manufacturers stamp TC
Although pipettes may transfer any volume, they are or TD near the top of the pipette to alert the user as to
usually used for volumes of 20 mL or less; larger vol- the type of pipette. Like other TC-designated labware,
umes are usually transferred or dispensed using auto- a TC pipette holds or contains a particular volume but
mated pipetting devices. Table 1.4 outlines the pipette does not dispense that exact volume, whereas a TD
classification. pipette will dispense the volume indicated.
Similar to other laboratory equipment, pipettes When using either pipette, the tip must be
are designed to contain (TC) or to deliver (TD) a immersed in the intended transfer liquid to a level
that will allow the tip to remain in solution after the
volume of liquid has entered the pipette—without
touching the vessel walls. The pipette is held upright,
not at an angle (Figure 1.2). Using a pipette bulb
or similar device, a slight suction is applied to the
opposite end until the liquid enters the pipette and
the meniscus is brought above the desired gradua-
tion line (Figure 1.3A), and suction is then stopped.
While the meniscus level is held in place, the pipette
tip is raised slightly out of the solution and wiped
with a laboratory tissue to remove any adhering liq-
uid. The liquid is allowed to drain until the bottom
of the meniscus touches the desired calibration mark
(Figure 1.3B). With the pipette held in a vertical
position and the tip against the side of the receiving
vessel, the pipette contents are allowed to drain into
Figure 1.1 Laboratory glassware. the vessel (e.g., test tube, cuvette, or flask). A blowout
© Wolters Kluwer. pipette has a continuous etched ring or two small,
14 Chapter 1 Basic Principles and Practices of Clinical Chemistry
Serologic/Mohr
Meniscus
10 Graduation line
9
A
Bottom of
Graduation line 10 the meniscus
9
B
Correct Figure 1.3 Pipetting technique. (A) Meniscus is brought
above the desired graduation line. (B) Liquid is allowed
to drain until the bottom of the meniscus touches the
Volumetric/Ostwald-Folin desired calibration mark.
© Wolters Kluwer.
A B
C
D
Figure 1.6 (A) Adjustable volume pipette. (B) Fixed volume pipette with disposable tips. (C) Multichannel pipette.
(D) Multichannel pipette in use.
© Wolters Kluwer.
16 Chapter 1 Basic Principles and Practices of Clinical Chemistry
Centrifuges
Centrifugation is a process in which centrifugal
force is used to separate serum or plasma from the
blood cells as the blood samples are being processed;
to separate a supernatant from a precipitate during an
analytic reaction; to separate two immiscible liquids,
such as a lipid-laden sample; or to expel air. When
samples are not properly centrifuged, small fibrin
clots and cells can cause erroneous results during A
analysis. The centrifuge separates the mixture based
on mass and density of the component parts. It con-
sists of a head or rotor, carriers, or shields that are
attached to the vertical shaft of a motor or air com-
pressor and enclosed in a metal covering. The cen-
trifuge always has a lid, with new models having a
locking lid for safety. Many models include a brake
or a built-in tachometer, which indicates speed, and
some centrifuges are refrigerated.
Centrifugal force depends on three variables:
mass, speed, and radius. The speed is expressed in rev-
olutions per minute (rpm), and the centrifugal force
generated is expressed in terms of relative centrifugal B
force (RCF) or gravities (g). The speed of the centri-
Figure 1.10 (A) Benchtop centrifuge. (B) Swinging-
fuge is related to the RCF by the following equation:
bucket rotor.
–5 2
RCF = 1 .118 × 10 × r × (rpm) © Wolters Kluwer.
Laboratory Equipment 19
Solve the equation for the unknown quantity by add- Example 1.2: Weight/Volume (w/v)
ing a positive 6 to both sides of the equal sign, and the
equation becomes The most frequently used term for a percent solu-
tion is weight per volume, which is often expressed
6 – 5.27 = log N as grams per 100 mL of the diluent. To make up
(Eq. 1.17)
0.73 = log N 1000 mL of a 10% (w/v) solution of NaOH, use the
preceding approach. Restate the w/v as a fraction:
The result is 0.73, which is the antilogarithm value of
N, which is 5.37, or 5.4: 10 g
10% = = 0.10
100 mL
Antilog 0.73 = N; N = 5.37 = 5.4 (Eq. 1.18)
The hydrogen ion concentration for a solution with a Next, set up a ratio and solve for x
pH of 5.27 is 5.4 × 10−6. Many scientific calculators 10g x
have an inverse function that allows for more direct =
100 mL 1000 mL (Eq. 1.22)
calculation of negative logarithms.
x = 100g
Concentration Lastly, add 100 g of 10% NaOH to a 1000-mL vol-
A description of each concentration term is pro- umetric Class A flask and add sufficient volume of
vided at the beginning of this chapter. The follow- reagent-grade water to the calibration mark.
ing discussion focuses on the basic mathematical
expressions needed to prepare reagents of a stated Example 1.3: Volume/Volume (v/v)
concentration.
If both chemicals in a solution are in the liquid form,
the volume per unit volume is used to give the vol-
Percent Solution ume of solute present in 100 mL of solution. To make
A percent solution is determined in the same man- up 50 mL of a 2% (v/v) concentrated hydrochloric
ner regardless of whether weight/weight, volume/ acid solution, a similar approach is used. The (v/v) is
volume, or weight/volume units are used. Percent restated as a fraction:
implies “parts per 100,” which is represented as per-
cent (%) and is independent of the molecular weight 2 mL
2% = = 0.02
of a substance. 100 mL
substance. When trying to determine the amount of 40 g/mol. Rearrange the equation so that
substance needed to yield a particular concentration, grams can be canceled, and the remaining
initially decide what final concentration units are units reflect those needed in the answer,
needed. For molarity, the final units will be moles per which are mole/L.
liter (mol/L) or millimoles per milliliter (mmol/mL). Step 3: The equation becomes
The second step is to consider the existing units and
the relationship they have to the final desired units. 24 g NaOH 1mol mol
× = 0.6 (Eq. 1.25)
Essentially, try to put as many units as possible into L 40 g NaOH L
like terms and arrange so that the same units cancel
each other out, leaving only those needed in the final By canceling out like units and performing the appro-
answer. To accomplish this, it is important to remem- priate calculations, the final answer of 0.6 M or
ber what units are used to define each concentration 0.6 mol/L.
term. It is key to understand the relationship between
molarity (moles/liter), moles, and gmw. While molar- Example 1.6
ity is given in these examples, the approach for molal-
Prepare 250 mL of a 4.8 M solution of HCl.
ity is the same except that one molal is expressed as
one mole of solute per kilogram of solvent. For water, Step 1: Start with what is given: 4.8 moles/L
one kilogram is proportional to one liter, so molarity Step 2: Determine the gmw of HCl ([H = 1] +
and molality are equivalent. [Cl = 35.5] = 36.5 g/mol)
2. H2SO4 (gmw = 98 g/mol, valence = 2) existing units are exchanged for units needed. The
equation is
98 g
= 49 g per equivalent weight(Eq. 1.28) 2.5 Eq HCl 36.5 g × HCl 1 mol HCl
2 × ×
L 1 Eq 36.5 g HCl (Eq. 1.33)
Example 1.8 = 2.5 mol/L HCl
What is the normality of a 500 mL solution that con- The second approach is to use the normality-to-
tains 7 g of H2SO4? molarity conversion formula. The equation now
Step 1: What units are needed? Answer: becomes
Normality expressed as equivalents per liter M × V = 2.5 N
(Eq/L).
V =1
Step 2: Start with what is given: 7 g/500 mL (Eq. 1.34)
2.5 N
M= = 2.5 N
Step 3: Calculate the gmw of H2SO4 (98 g/mol) 1
and determine the valence (2)
When the valence of a substance is 1, the molar-
Step 4: Add a conversion factor to convert mL ity will equal the normality. As previously men-
to L (1000 mL/1 L) tioned, normality either equals or is greater than the
Step 5: Cancel out like terms and calculate molarity.
the result in Eq/L. Although there are various methods to calcu-
late laboratory mathematical problems, the tech-
This equation is:
nique of using conversion factors and canceling like
7 g H2SO4 1 Eq 1000 mL units is used in most clinical chemistry calculation,
× × regardless of whether the problem requests molar-
500 mL 49 g H2SO4 1 L (Eq. 1.29)
ity and normality or exchanging one concentration
= 0.285 Eq/L = 0.285 N term for another. However, it is necessary to recall
the interrelationship between all the units in the
Example 1.9 expression.
What is the normality of a 0.5 M solution of H2SO4?
Specific Gravity
Continuing with the previous approach, the final
equation is Density is expressed as mass per unit volume of a
substance. The specific gravity is the ratio of the
0.5 mol H2SO4 98 g H2SO4 1 EqH2SO4 density of a material when compared with the den-
× × sity of pure water at a given temperature and allows
L mol H2SO4 49 g H2SO4
the laboratorian a means of expressing density in
= 1 Eq/L = 1N terms of volume. The units for density are grams per
(Eq. 1.30) milliliter (g/mL). Specific gravity is often used with
When converting between molarity and normal- very concentrated materials, such as commercial
ity, the following conversion formula may be acids (e.g., sulfuric and hydrochloric acids).
applied: The density of a concentrated acid can also be
expressed in terms of an assay or percent purity.
M × V = N (Eq. 1.31) The actual concentration is equal to the specific
gravity multiplied by the assay or percent purity value
where V is the valence of the compound. Using this (expressed as a decimal) stated on the label of the
formula, Example 1.9 becomes container.
0.5 M × 2 = 1N (Eq. 1.32) Example 1.11
Example 1.10 What is the actual weight of a supply of concentrated
HCl on which the label reads, specific gravity 1.19
What is the molarity of a 2.5 N solution of HCl? with an assay value of 37%?
This problem may be solved in several ways.
One way is to use the stepwise approach in which 1.19 g/mL × 0.37 = 0.44g/mL of HCl (Eq. 1.35)
24 Chapter 1 Basic Principles and Practices of Clinical Chemistry
Initial/preceding dilution × (x) = dilution needed A procedure requires 0.9 g of CuSO4. All that is avail-
able is CuSO4·5H2O. What weight of CuSO4·5H2O
Solve for (x). is needed? Calculate the percentage of CuSO4 pres-
Using the dilution factors listed above and solving ent in CuSO4·5H2O. Again, using the gmw, the per-
for (x), the equations become centage is
1/10 × (x) = 1/20 160
= 0.64, or 64%(Eq. 1.49)
where (x) = 2 (or 1 part stock to 1 part diluent) 250
28 Chapter 1 Basic Principles and Practices of Clinical Chemistry
Absorbance
0.9 g CuSO 4 needed 0.3
0.64 CuSO 4 in CuSO 4 ⋅ 5H 2O (Eq. 1.50) 0.2
= 1.41 g CuSO 4 5H 2O required
0.1
For reporting enzyme activity, the IU, or Note: b is usually given as 1 cm; because it is a con-
international unit, is defined as the amount of stant, it may not be considered in the calculation.
30 Chapter 1 Basic Principles and Practices of Clinical Chemistry
SUPERNATANT
Anticoagulant present—plasma
Whole blood contains fibrinogen
(if anticoagulant
present)
Buffy coat
A B
Figure 1.16 Blood sample. (A) Whole blood. (B) Whole blood after separation.
© Wolters Kluwer.
because of inherent arterial pressure, difficulty in causes a stasis of blood flow and an increase in hemo-
stopping bleeding afterward, and the undesirable concentration and anything bound to proteins or
development of a hematoma, which cuts off the blood the cells. Having patients open and close their hand
supply to the surrounding tissue.23 during phlebotomy is of little value and may cause
Continued metabolism may occur if the serum an increase in potassium or lactic acid and, therefore,
or plasma remains in contact with the cells for any should be avoided. IV contamination should be con-
period. Evacuated tubes may incorporate gel-like sidered if a large increase occurs in the substances
material that serves as a barrier between the cells and being infused, such as glucose, potassium, sodium,
the plasma or serum and seals these compartments and chloride, with a decrease of other analytes such
from one another during centrifugation. Some gels as urea and creatinine. In addition, the proper anti-
can interfere with certain analytes, and manufacturer septic must be used. Isopropyl alcohol wipes, for
recommendations should be followed. example, are used for cleaning and disinfecting the
Proper patient identification is the first step collection site; however, isopropyl alcohol is not rec-
in sample collection. The importance of using the ommended for disinfecting the site when drawing
proper collection tube, avoiding prolonged tourni- blood alcohol levels (in such cases, chlorhexidine is
quet application, drawing tubes in the proper order, used as the disinfectant).
and proper labeling of tubes cannot be stressed Blood is not the only sample analyzed in the
strongly enough. Prolonged tourniquet application clinical chemistry laboratory. Urine is the next most
common fluid for determination. Most quantitative tube(s) with the appropriate test requisition and
analyses of urine require a timed sample (usually patient identification labels. This is a particularly
24 hours); a complete sample (all urine collected sensitive area of preanalytic error. Bar code labels
within the specified time) can be difficult because (either as 1D linear barcodes, or 2D QR barcodes) or
many timed samples are collected by the patient in radiofrequency ID chip labeling on primary sample
an outpatient situation. Creatinine analysis is often tubes are vital in detecting errors and to minimizing
used to assess the completeness of a 24-hour urine clerical errors. The laboratorian must also ascertain
sample because creatinine output is relatively free if the sample is acceptable for further processing.
from interference and is stable, with little change in The criteria used depends on the test involved but
output within individuals. The average adult excretes usually include volume considerations (i.e., is there
1 to 2 g of creatinine per 24 hours. Urine volume dif- sufficient volume for testing needs?), use of proper
fers widely among individuals; however, a 4-L con- anticoagulants or preservatives (i.e., was it collected
tainer is adequate (average output is ≈2 L). It should in the correct evacuated tube?), whether timing is
be noted that this analysis differs from the creatinine clearly indicated and appropriate for timed testing,
clearance test used to assess glomerular filtration rate, and whether the specimen is intact and has been
which compares urine creatinine output with that in properly transported (e.g., on ice, within a reason-
the serum or plasma in a specified time interval and able period, protected from light). Unless a whole
urine volume (often correcting for the surface area). blood analysis is being performed, the sample is then
Other body fluids analyzed by the clinical chem- centrifuged as previously described and the serum
istry laboratory include cerebrospinal fluid (CSF), or plasma should be separated from the cells if not
paracentesis fluids (pleural, pericardial, and perito- analyzed immediately. Today, the use of serum sep-
neal), and amniotic fluids. The color and characteris- arator tubes and plasma separator tubes is common
tics of the fluid before centrifugation should be noted practice.
for these samples. Before centrifugation, a laborato- Once the sample is processed, the laboratorian
rian should also verify that the sample is designated
should note the presence of any serum or plasma char-
for clinical chemistry analysis only because a single
acteristics such as hemolysis and icterus (increased
fluid sample may be shared among several depart-
bilirubin pigment) or the presence of turbidity often
ments (i.e., hematology or microbiology), and cen-
associated with lipemia (increased lipids). (See
trifugation could invalidate other laboratory testing
Table 1.5.) Many analytes are stable at room tem-
in those areas.
perature between 24 to 72 hours. However, if
CSF is an ultrafiltrate of the plasma and is approx-
testing is not to be performed within 8 hours,
imately two-thirds of the plasma glucose value. For
it is recommended that serum and/or plasma be
glucose and total protein analysis, it is recommended
that a blood sample be analyzed concurrently with
the analysis of those analytes in the CSF. This will
assist in determining the clinical utility of the values Table 1.5 Examples of Hemolyzed, Icteric,
and Lipemic/Turbid Samples
obtained on the CSF sample. This is also true for
lactate dehydrogenase and protein assays requested Hemolyzed (red)
on paracentesis fluids. All fluid samples should be
handled immediately, without delay between sample
procurement, transport, and analysis.
Amniotic fluid may be used to assess fetal lung
maturity, congenital diseases, hemolytic diseases,
genetic defects, and gestational age. The laboratorian
should verify the specific handling of this fluid with
the manufacturer of the testing procedure(s).
laboratories consider all aspects of preanalytic varia- separation of cells from serum, improper storage,
tion as part of their quality assurance plans, includ- and collection.
ing effective problem solving and documentation.
Physiologic variation refers to changes that occur
within the body, such as cyclic changes (diurnal or
Chain of Custody
circadian variation) or those resulting from exer- When laboratory tests are likely linked to a crime
cise, diet, stress, gender, age, underlying medical or accident, they become forensic in nature. In
conditions (e.g., fever, asthma, and obesity), drugs, these cases, documented specimen identification is
or posture. Samples may be drawn on patients required at each phase of the process. Each facility has
who are fasting (usually overnight for at least its own forms and protocols; however, the patient,
8 hours). When fasting, many patients may drink and usually a witness, must identify the sample. The
water to avoid becoming dehydrated, which can sample should be collected and then sealed with a
lead to falsely elevated electrolyte results. Patient tamper-proof seal. Any individual in contact with
preparation for timed samples or those requiring the sample must document receipt of the sample, the
specific diets or other instructions must be well condition of the sample at the time of receipt, and
written and verbally explained to patients. Elderly the date and time it was received. In some instances,
patients often misunderstand or are overwhelmed one witness verifies the entire process and cosigns
by the directions given to them. Collection and pro- as the sample moves along. Any analytic test could
cessing variations are related to those factors dis- be used as part of legal testimony; therefore, the
cussed under specimen processing. Clerical errors laboratorian should give each sample—even without
are the most frequently encountered, followed by the documentation—the same attention given to a
other pre-analytical variables including inadequate forensic sample.
Specimen Collection and Handling 35
Electronic and Paper Reporting a given test based on the reason and type of testing,
of Results and there are codes given for common profiles or
array of tests that represent each test’s separate codes.
Electronic transmission of laboratory data and the For example, blood glucose testing includes the
use of physician order entry, electronic medical codes 82947 (quantitative except for strip reading),
record, coding, billing, and other data management 82948 (strip reading), and 82962 (self-monitoring
systems maintain the integrity of data generated by FDA-cleared device), and the comprehensive
by providing reporting guidelines and safeguards metabolic panel (80053) includes albumin, alkaline
to ensure privacy of the data and records. There phosphatase, total bilirubin, blood urea nitrogen,
are various data management systems in use by total calcium, carbon dioxide, chloride, creatinine,
healthcare agencies related to accessing laboratory glucose, potassium, total protein, sodium, and ala-
information. For example, the Logical Observa- nine and aspartate transaminases and their associ-
tion Identifiers Names and Codes (LOINC) system, ated codes. At a minimum, any laboratory reporting
International Federation of Clinical Chemistry/ system must include a unique patient identifier, test
International Union of Pure and Applied Chemistry name, and code that relates back to the HCPCS and
(IFCC/IUPAC), ASTM, Health Level Seven Interna- ICD databases. For reporting purposes, whether
tional (HL7), and Systematized Nomenclature of paper or electronic, the report should include the
Medicine, Clinical Terms (SNOMED CT) are data- unique patient identifier and test name (including
bases that use unique coding systems for laboratory any appropriate abbreviations), the test value with
observations. There are also additional proprietary the unit of measure, date and time of collection,
systems in use. To standardize these processes and sample information, reference ranges, plus any
to protect the confidentiality of patient information other pertinent information for proper test inter-
as required by the Health Insurance Portability and pretation. Results that are subject to autoverifica-
Accountability Act (HIPAA), the Healthcare Com- tion should be indicated in the report. Table 1.7 lists
mon Procedure Coding System Level II (HCPCS) the information that is often required by accredita-
test and services coding system was developed by tion agencies.26
the Centers for Medicare and Medicaid Services
(CMS) to be recognized by all insurers for reim-
bursement purposes. The International Classifi-
cation of Diseases (ICD) developed by the World Table 1.7 Minimum Elements of Paper
or Electronic Patient Reports
Health Organization (WHO) uses codes identify-
ing patient diseases and conditions. In the United Name and address of laboratory performing the
States, ICD-11 is currently in place. The clini- analysis including any reference laboratories used
cal modifications are maintained by the National Patient name and identification number or unique
Center for Health Statistics. Incorporated into the identifier
HCPCS system is the Current Procedural Termi-
Name of physician or person ordering the test
nology (CPT) codes, developed by the American
Medical Association, which identify almost all lab- Date and time of specimen collection
oratory tests and procedures. The CPT codes are Date and time of release of results (or available if
divided into different subcategories, with tests or needed)
services assigned five-digit numbers followed by
Specimen source or type
the name of the test or service. Together, these stan-
dard coding systems help patient data and tracking Test results and units of measure if applicable
of disease transmission between all stakeholders
Reference ranges, when available
such as physicians, patients, epidemiologists, and
insurers. Comments relating to any sample or testing
Clinical laboratory procedures are found in CPT interferences that may alter interpretation
Category I with coding numbers falling between © Jones & Bartlett Learning.
80,000 and 89,999. There can be several codes for
36 Wrap-Up Basic Principles and Practices of Clinical Chemistry
WRAP-UP
To support your learning, review
the chapter learning objectives and
complete the online activities. The
Navigate 2 Advantage Access included
with each new print copy of this book
offers a wealth of resources. These
include practical learning activities
and study tools such as flashcards,
math practice, an eBook with
interactive questions, and more!
References
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