0% found this document useful (0 votes)
35 views17 pages

Document 1

the article is medical

Uploaded by

vacedo8825
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd
0% found this document useful (0 votes)
35 views17 pages

Document 1

the article is medical

Uploaded by

vacedo8825
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd
You are on page 1/ 17

Research Article Vol. 13, No.

4 / 1 Apr 2022 / Biomedical Optics Express 1784

Generalized figure of merit for plasmonic dip


measurement-based surface plasmon
resonance sensors
T REESUKON T REEBUPACHATSAKUL , 1 A PIVITCH B OOSAMALEE , 1
K AMEJIRA C HAITHATWANITCH , 1 AND S UEJIT P ECHPRASARN 2,*
1 Department of Biomedical Engineering, School of Engineering, King Mongkut’s Institute of Technology,
Ladkrabang, Bangkok 10520, Thailand
2 College of Biomedical Engineering, Rangsit University, Pathum Thani 12000, Thailand
* [email protected]

Abstract: We propose a theoretical framework to analyze quantitative sensing performance


parameters, including sensitivity, full width at half maximum, plasmonic dip position, and figure
of merits for different surface plasmon operating conditions for a Kretschmann configuration.
Several definitions and expressions of the figure of merit have been reported in the literature.
Moreover, the optimal operating conditions for each figure of merit are, in fact, different. In
addition, there is still no direct figure of merit comparison between different expressions and
definitions to identify which definition provides a more accurate performance prediction. Here
shot-noise model and Monte Carlo simulation mimicking the noise behavior in SPR experiments
have been applied to quantify standard deviation in the SPR plasmonic dip measurements to
evaluate the performance responses of the figure of merits. Here, we propose and formulate a
generalized figure of merit definition providing a good performance estimation to the detection
limit. The measurement parameters employed in the figure of merit formulation are identified by
principal component analysis and machine learning. We also show that the proposed figure of
merit can provide a good estimation for the surface plasmon resonance performance of plasmonic
materials, including gold and aluminum, with no need for a resource-demanding computation.

© 2022 Optica Publishing Group under the terms of the Optica Open Access Publishing Agreement

1. Introduction
Surface plasmon resonance (SPR) is a label-free detection for monitoring biomolecular interaction
in real-time, which utilizes the resonating effect of surface plasmons (SPs) or the induced electric
fields and magnetic fields that leak out from the uniform surface of noble metals, such as gold
(Au) and silver (Ag) [1]. These noble metals consist of metallic bonds that electrons can move
freely and oscillate with the same frequency as surface plasmon due to the external electric fields
causing the electromagnetic response referring to surface plasmon resonance (SPR) or surface
plasmon polaritons (SPP) [2]. The coupling condition of the surface plasmons depends on the
noble metal’s surrounding materials; this enables the label-free measurement and gives rise to
the underlining sensitivity mechanism [3]. In addition, the noble metals are very conductive and
contain a complex permittivity, resulting in the lossy light reflection [4].
Gold (Au) is a noble metal widely employed in biological and biomedical measurements in
biosensing applications due to its chemical stability and biocompatibility [5]. It also provides
convenient coupling angles and coupling wavelengths to excite surface plasmons. Furthermore,
since the natural frequency of surface plasmons of gold matches the light in the range of red to
infrared (more than 520 nm) wavelength [6], the incident light in this range can be applied to
surface plasmon resonance through an optical prism [7], a high numerical aperture objective lens
[8] and an optical grating [9].

#451023 https://doi.org/10.1364/BOE.451023
Journal © 2022 Received 10 Dec 2021; revised 16 Feb 2022; accepted 16 Feb 2022; published 2 Mar 2022
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1785

The configuration of the surface plasmon polariton-based measurement (SPP-based sensor)


consists of two widely adopted configurations, which are the Kretschmann configuration [10] and
the Otto configuration [11]. The difference between these two configurations is the arrangement
of three layers: sensing area, noble metal, and a glass prism. In Otto configuration, the sensing
area or spacing gap is located between the noble metal film and glass prism; meanwhile, in
the Kretschmann configuration, the noble metal film is located between the sensing region
and the glass prism as shown in Fig. 1(a). The Otto configuration required a sophisticated
channel fabrication, and the nanoscale thickness of the air gap results in difficulty in fabrication;
therefore, the Kretschmann configuration is more widely used as a surface plasmon polariton
sensor, although research works have reported that the Otto configuration can provide a higher
sensitivity [8,12]. Furthermore, the sensing performance parameters for different operating
conditions are similar for the Kretschmann and Otto configurations. Therefore, the results for the
Otto configuration are omitted to shorten the length of the manuscript.

Fig. 1. Shows (a) Kretschmann configuration with angular scanning detection mechanism
and (b) sensing performance of angular scanning detection mechanism.

The Kretschmann configuration has been employed and utilized in several sensing applications,
for example, binding kinetics [13,14], refractive index sensing [15,16], pathogen detection
[17,18], voltage sensing [19,20], surface plasmonic microscopy [21,22], and surface-enhanced
Raman spectroscopy [23]. Recently, the SPR has demonstrated its ultra-sensitivity in measuring
the kinetic activity of SAR-COV2 (COVID19) and the angiotensin-converting enzyme 2 (ACE2)
[24,25]. In addition, Tang et al. [26] reported COVID-19 antibody immunoglobulin-G (IgG)
measurements on hospitalized patients using SPR.
Several detection schemes for SPR sensing include wavelength scanning [27,28] using a tunable
light source, optical fiber-based SPR sensors [29], and angular scanning detection [30–32]. Here,
the angular scanning detection scheme is investigated as an example to demonstrate findings
in this study. Therefore, applying the proposed figure of merit (FOM) is limited to neither the
plasmonic gold sensor material nor the angular scanning detection scheme. It will be shown in
the result section later that although the proposed FOM has been derived and proved using the
plasmonic gold material, it can be applied to accurately predict responses of higher loss plasmonic
material, such as aluminum (Al). For the Kretschmann-based angular interrogation detection,
the light source is a p-polarized monochromatic light source with its wavelength λ illuminated a
uniform gold plasmonic sample with the thickness d with the complex refractive index of gold
nm, through a glass prism with refractive index n0 of 1.52 with a varying incident angle θ0 ,
as shown in Fig. 1(a). The highest surface plasmon coupling strength occurs at the minimum
reflectance position, so-called plasmonic angle θsp , as shown in Fig. 1(b). The reflectance spectra
in Fig. 1(b) were calculated using Fresnel equations and the transfer matrix calculation [33] for
the λ of 633 nm, d of 40 nm, and the sample region refractive indices ns of 1.33 (water) and 1.35
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1786

(80 mg/ml concentration of Bovine serum albumin protein solution [34]) shown in solid blue and
solid red curves, respectively.
Priya et al. [35] have reported that for coupling angle measurement through an optical glass
prism, the incident wavelength strongly affects the plasmonic angle shift (∆θsp ), full width at
half maximum (FWHM), depth of the plasmonic intensity dip (Isp ), and FOM that the ∆θsp , the
sensitivity (S), and the FWHM are exponentially decaying at a longer wavelength. On the other
hand, the SPR dip depth and the FOM are independent of the incident wavelength. Lakayan et
al. [6] have reported a similar finding that the incident wavelength is crucial in the ∆θsp and
the FWHM. They reported that λ of 890 nm had a 10-time higher S than the conventional SPR
excitation wavelengths of 670 nm and 785 nm.
A FOM is one of the crucial sensing performance parameters; it characterizes sensors’
predictive ability and performance. Therefore, it is widely adapted to determine sensors’
performance in different types of sensors, for example, surface plasmon resonance [19,36],
Fabry–Perot resonators [37], optical ring resonators [38], and surface phonon structures [12].
There are several definitions of FOMs based on the purpose and detection mechanisms. For
example, for surface plasmon resonance, the FOM usually employed is the S over the FWHM
[39–41]. In addition, some other parameters, such as Isp , intensity contrast (∆I), have been
employed in the FOM formulation [29,42–45].
There is no report on a direct FOM comparison between different expressions and formulas.
Therefore, this research aims to propose a theoretical framework to provide the comparison
between different expressions of FOMs and quantify the quantitative performance parameters,
including S, θsp , Isp , FWHM, ∆I, and FOMs of SPR sensors to analyze the sensing capability
using Fresnel equations and transfer matrix approach [33]. In addition, we also formulate a
generalized FOM that reflects the SPR limit of detection (LoD) calculated using Monte Carlo
and the shot-noise model for a typical digital camera and input optical power to the SPR system.
Principal component analysis (PCA) and machine learning (ML) models have been utilized to
identify key performance parameters that contribute to the proposed FOM formulation. To the
best of the authors’ knowledge, the theoretical framework to analyze and provide a direct FOMs
comparison between different definitions and a generalized FOM formulation has never been
investigated and reported before. One of the significant challenges in optical biosensing is to
measure a low concentration sample or a small number of analytes, such as single-molecule
detection [46] and DNA fragments [24,25]. These sensitivity demanding applications, of course,
require an optical sensor design and engineered optical sensor surfaces, such as structured
surfaces [47] and metamaterials [48]. The proposed generalized FOM can be applied to estimate
the sensor’s sensing performance during the optical sensor design process prior to the sensor
fabrication with no need for time-consuming and resource-demanding computation.

2. Materials and methods


2.1. Optical simulations of SPR detection schemes
Fresnel equations and the transfer matrix calculation [33] were employed to simulate the
reflectance of the Kretschmann SPR sensor as depicted in Fig. 1(a) to analyze the sensing
performance of angular scanning detection mechanism in which the light wavelength λ was fixed,
and the incident angle θ0 was varied as depicted in Fig. 1(a). The complex refractive index of
gold nm employed in the study was extracted from gold’s complex dielectric dispersion function
reported in Johnson and Christy 1972 [49].

2.2. Shot-noise model and Monte Carlo simulation


The reflectance spectra were shot-noise added [50] for photon energy of 5000 pJ captured using a
digital camera with 1280 pixels × 720 pixels in which each pixel corresponding to 0.001 degrees
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1787

assuming that the camera had the quantum efficiency of 60% for all the wavelengths for fair
performance comparison and being independent of the camera’s performance, as depicted in
Fig. 2(a). The shot-noise model is a dominant noise source since the SPR dip has low light
intensity, especially around the plasmonic angle [51].

Fig. 2. (a) a camera frame with shot-noise added corresponding to the total energy of
5000 pJ, (b) camera rows summation to form a line scan plasmonic dip with 4th-degree
polynomial curve fitting. The case shown here was d of 25 nm and λ of 850 nm.

The plasmonic angle for each noise-added camera frame was then recovered employing the
following steps. (1) Sum all the intensity of 720 camera rows to a single-row angular spectrum to
reduce the random shot-noise as depicted in Fig. 2(a), and (2) apply the 4th-degree polynomial
curve fitting to the plasmonic dip covering sinθ0 range of ± 0.065 to determine the θsp position
for each camera frame as shown in Fig. 2(b).
A Monte Carlo simulation [50] with 1,500 iterations of randomized shot-noise added camera
frames was then employed to analyze and calculate the plasmonic angle positions and their LoD
as one standard deviation, σ.

2.3. Sensing performance parameters


The quantitative performance parameters including S, θsp which minimum reflectance occurs,
Isp , ∆I, FWHM, and FOMs can be computed from the reflectance spectrum calculated using the
Fresnel equations and the transfer matrix calculation between two different sample refractive
indices of ns of 1.33 (water) and 1.35 (BSA protein solution) [34]. The reason for choosing
the two refractive indices was that they were typically employed biological samples for SPR
performance characterization [1,52]. The proposed theoretical framework is not limited to the
investigated sample refractive indices. It is established that the SPR measurement has a wide
refractive index response range without losing its sensitivity and plasmonic dip characteristics
[8,53].
(1) FWHM is defined as the averaged width in sinθ0 space of normalized reflectance dips with
less than 50 percent of maximum optical intensity for the two sample refractive indices, as
expressed in Eq (1) and depicted in Fig. 1(b).
FWHM1.33 + FWHM1.35
FWHM = (1)
2

Where the terms FWHM1.33 and FWHM1.35 are the FWHM of normalized reflectance spectra for
two sample refractive indices of 1.33 and 1.35 corresponding to water and 80 mg/ml concentration
of Bovine serum albumin protein solution [34], respectively.
(2) ∆I is defined as the average difference between optical intensity at the plasmonic reflectance
dip Isp and the intensity at the critical wave vector (Imax ) when the sample refractive indices
were 1.33 and 1.35 as expressed in Eq. (2). This parameter indicates the depth of the
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1788

plasmonic dip intensity compared to its intensity baseline. The reflectance baseline
intensity is usually high since the SPR detection requires attenuated total internal reflection
(ATR). Therefore, suppose the ∆I is low means that the plasmonic dip is not deep, and
the measurement needs to detect low contrast signal in the strong background leading
to a lower signal-to-noise ratio (SNR). On the other hand, a higher ∆I indicates a higher
signal-to-noise ratio.
∆I1.33 + ∆I1.35
∆I = (2)
2
The terms ∆I1.33 and ∆I1.35 are an intensity contrast compared to the intensity baseline of the
two sample refractive indices.
(3) S is defined as the change in sinθsp over the change in sensing region refractive index ∆ns ,
which was 0.02 (1.35–1.33) for this study, as expressed in Eq. (3) and depicted in Fig. 1(b).
Note that the unit for Eq. (4) is RIU−1 .
∆sinθ sp
S= (3)
∆ns
(4) Detection range (DR) is defined as the highest refractive index value that can measure
before the plasmonic angle is greater than 90 degrees; in other words, still within the
possible range of incident angles that the prism can accommodate.
(5) FOMs: there are several definitions reported for angular scanning in the literature.
(5.1) the S over the FWHM [39,54–60] for plasmonic dip position measurement as
expressed in Eq. (4).
S ∆sinθ sp
FOM1 = = (4)
FWHM FWHM∆ns
(5.2) the S times the ∆I over the FWHM [29,42–44] for the plasmonic dip position
measurement, as expressed in Eq. (5).
∆I × S ∆I∆sinθ sp
FOM2 = = (5)
FWHM FWHM∆ns
(5.3) the S over the product of the FWHM and the Isp [45], as expressed in Eq. (6).
S ∆sinθ sp
FOM3 = = (6)
FWHM ×Isp FWHM∆ns Isp
(5.4) Here, we propose a generalized FOM as expressed in Eq. (7), which will be proved
later that the FOM4 can provide a better performance estimation compared to the
other FOMs and similar to the inverse of the LoD [61] calculated using the shot-noise
and Monte Carlo simulation as described in section 2.2.
√ √
∆I × S ∆I × ∆sinθ sp
FOM4 = √︁4 = √︁ (7)
FWHM × Isp 4
Isp × FWHM∆ns
Some other FOM definitions reported in the literature are not directly measurable from the
plasmonic reflectance spectra. Those FOMs were excluded from the scope of the study. For
example, Shen et al. [62] have reported an alternative approach calculating the FOM using the
transmission line model and found that the FOM is proportional to the equivalent reactance over
the resistance of the plasmonic sensor. Doiron et al. [63]. have reported that the FOM depends
on the optical power. These parameters cannot be readily extracted from the optical reflectance
spectra compared to the four FOMs in Eq. (4) to Eq. (7).
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1789

(6) As explained earlier, LoD is defined as one standard deviation (σ) of plasmonic angles
recovered from the 1,500 camera frames with random shot-noise. The LoD is frequently
employed as a FOM indicator [64]. Here, the concept of FOM is related to the LoD by
defining the FOM as 1/LoD.

3. Results and discussions


3.1. Performance parameters and optical reflectance
The performance parameters described in section 2.3 were computed for a uniform plasmonic
gold sensor coated on a standard BK7 glass with sample refractive indices of 1.33 and 1.35.
The λ and d were varied from 600 nm to 1900nm and 10 nm to 80 nm, respectively. The optical
wavelength of 1900nm was far beyond the optical communication wavelength of 1500 nm and
general optical applications. The wavelength of 1900nm was the longest wavelength reported by
Johnson and Christy for the gold refractive index [49]. These wavelengths and the gold thickness
range were chosen to ensure that the analysis covered all the characteristics of SPR reflectance
curves ranging from low to high attenuation coefficient, coupling loss, and ohmic loss [65]. It
will be shown in section 3.5 that the proposed FOM can be applied to analyze a higher loss
plasmonic material, such as aluminum.
Figure 3(a)-(f) shows the angular interrogation measurement’s average FWHM, ∆I, Isp , sinθsp
when ns was 1.33, S, and DR, respectively. For every d, the FWHM decreases exponentially
when the incident wavelength λ increases, like the finding highlighted by Priya et al. [35]. Like
the effect of λ, d also affects the FWHM. The width of the plasmonic dip or the FWHM also
exponentially increases when the thickness d decreases. Therefore, the largest FWHM occurs at
the bottom left-hand corner of Fig. 3(a); on the other hand, the narrowest FWHM of 9.61×10−4
occurs at the upper right-hand corner of the FWHM contour corresponding to the operating
position the d of 80 nm and λ of 1900nm. The strong ∆I contrast occurred along the diagonal
line of Fig. 3(b). The maximum ∆I of 0.99 contrast occurs at λ of 1900nm and d of 26 nm. Note
that the maximum intensity baseline at the critical angle Imax can be determined from the ∆I and
the Isp . Therefore, it is omitted to save the space of the manuscript. The operating position with
the minimum Isp of 8.18×10−7 was at the d of 52.5 nm and λ of 720 nm.
For the plasmonic angle position sinθsp , the shorter λ gave a higher sinθsp ; when λ increased,
the sinθsp exponentially decreased. Furthermore, the metal thickness also affected the plasmonic
coupling condition when the thickness was lower than 50 nm. In contrast, when the gold thickness
d thicker than 50 nm, the SP coupling conditions did not significantly change. Thus, for the
angular detection, the lower sinθsp excitation can reduce the demand for a high incident angle
illumination [49], which requires a high refractive index prism; meanwhile, for the oil immersion
objective lens based SPR excitation, the lower sinθsp can lower the numerical aperture (NA)
requirement of the objective lens [37].
The highest sensitivity of 0.8241 RIU−1 occurred around the bottom right-hand corner of the
sensitivity contour when the gold thickness d was 80 nm and λ of 629 nm. The operating position
had lower intensity contrast around 0.2. Thus, the higher sensitivity occurred at thicker metal
thickness with d more than 30 nm and shorter incident wavelength. For the gold thickness d below
30 nm, the sensitivity degraded exponentially. It is essential to point out that the contour region
with high sensitivity around the 50 nm to 80 nm gold thickness has relatively low optical intensity
contrast ∆I, as shown in Fig. 3(b). The relationship is a classic trade-off between sensitivity S and
optical contrast ∆I [66]. For the region with the plasmonic wavelength λ below 1000 nm and the
gold thickness d below 30 nm, the ∆I contrast was low, and the sensitivity was also low, indicating
that the incident light to SPR coupling was inefficient. The increased attenuation loss of the
incident light coupled to the SPR [65] led to a broader FWHM and shorter propagation length.
The propagation length SPR interacts with the fewer sample region, resulting in a sensitivity S.
For the DR, the widest DR of 1.51 RIU appeared at the upper right-hand corner of the contour
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1790

Fig. 3. Shows quantitative performance parameters for angular scanning detection scheme:
(a) FWHM, (b) ∆I (c) Isp , (d) ksp when ns = 1.33, (e) S calculated using Eq. (3); and (f) DR.

corresponding to the operating position d of 80 nm and λ 1900nm. Again, there is a significant


trade-off between the sensitivity S and the DR. The SPR measurement conditions with higher
sensitivity have a lower detection range; on the other hand, those operating positions with lower
sensitivity have a more extended refractive index sensing range DR.
The following five operating positions have been chosen for performance comparison and
discussion in the later sections—the five operating positions’ A’ to ‘E’ in Fig. 3. (1) ‘A’ is the
operating position with d of 80 nm and λ 1900nm, corresponding to the narrowest FWHM, the
widest DR, and the highest FOM1 discussed later. (2) ‘B’ is the operating position with d of
26 nm and λ 1900nm, corresponding to the highest ∆I. (3) the operating position labeled ‘C’ with
d of 40 nm and λ 1835nm, corresponding to the highest FOM2 discussed later. (4) the operating
position labeled ‘D’ with d of 52.5 nm and λ 720 nm, corresponding to the lowest Isp and the
highest FOM3 , and (5) the operating position labeled ‘E’ with d of 80 nm and λ 629 nm for the
highest S. Fig. 4(a-e) show the SPR reflectance spectra and phase of the SPR reflectance spectra
responses of the operating positions’ A’ to ‘E’.

3.2. Figure of merits


Figure 5 shows different FOMs calculated using Eq. (4) to Eq. (7). Figure 5(a) is for the
FOM1 calculated using the S in Fig. 3(e) and the FWHM in Fig. 3(a). The highest FOM1 of
694.9274 RIU−1 was at the operating position of the incident wavelength of 1900nm and the
gold thickness of 80 nm (the operating position ‘A’), as shown in Fig. 5(a). However, the FOM1
did not consider the signal-to-noise ratio for intensity measurement; the maximum FOM1 had
the intensity contrast ∆I of only 0.04 or 4% in optical contrast. Therefore, the FOM1 cannot
provide a decent SPR operating position for the intensity detection and phase detection in angular
scanning measurement since there was virtually no phase contrast in the phase reflectance spectra,
as shown in Fig. 4(a). Note that the operating position ‘A’ is not experimentally practical for the
intensity-based measurement. Later in section 3.4, it will be shown through machine learning
and the PCA that the FOM1 cannot provide a good estimation for sensing performance prediction
because it does not consider the optical intensity information. The FOM2 calculated using Eq. (5)
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1791

Fig. 4. Shows the reflectance spectra for the following SPR operating positions with sample
refractive indices of 1.33 shown in solid blue curves for reflectance and dashed-blue curves
for phase response and 1.35 shown in solid red curves for reflectance and dashed-red curves
for phase response (a) the operating position labeled ‘A’ with d of 80 nm and λ of 1900nm
(the narrowest FWHM, the widest DR, and the highest FOM1 ), (b) the operating position
labeled ‘B’ with d of 26 nm, and λ of 1900nm (the highest ∆I), (c) the operating position
labeled ‘C’ with d of 40 nm and λ of 1835nm (the highest FOM2 ), (d) the operating position
labeled ‘D’ with d of 52.5 nm and λ of 720 nm (the lowest Isp and the highest FOM3 ); (e)
the operating position labeled ‘E’ with d of 80 nm and λ of 629 nm (the highest S).

considers the ∆I of the SPR dips by multiplying the ∆I to the FOM1 , as shown in Fig. 5(b).
The maximum FOM2 of 315.2957 RIU−1 occurred at the operating position with d of 40 nm
and λ 1835nm (the operating position ‘C’). The reflectance spectra of the operating position
are shown in Fig. 4(c)—the operating position balanced out the dip movement and the signal
contrast. Figure 5(c) shows the FOM3 response calculated using Eq. (6); the FOM1 in Fig. 5(a)
over the Isp in Fig. 3(c). The highest FOM3 of 2.05×108 RIU−1 was at the d of 52.5 nm and λ of
720 nm (the operating position ‘D’). The plasmonic reflectance spectra for the operating position
are shown in Fig. 4(d). The optimum operating position range for the FOM3 was narrow and
around the d of 50 nm to 55 nm and the incident wavelength of 650 nm to 850 nm, as shown as an
inset in Fig. 5(c). Fig. 5(d) shows the response of our proposed FOM definition as expressed
in Eq. (7). The highest FOM4 of 2811 RIU−1 appeared at d of 52.5 nm and λ of 720 nm; the
high FOM4 operating positions were along the diagonal line in Fig. 5(d) and significantly wider
than the FOM3 . It is essential to point out that although the FOMs have the same unit of RIU−1 ,
they cannot be directly compared since the number of performance parameters involved differ.
Table 1 summarizes the performance parameters for the five chosen operating conditions of the
plasmonic uniform gold sensor. In Table 1, the five operating positions were then ranked based
on their FOM performance, as indicated in a bracket next to the FOM. It can be seen that the
FOMs did not agree with each other, except the FOM3 and the FOM4 . The next question is how
they can be compared and justified under fair criteria.

3.3. Limit of detection


The LoD response was chosen as the criterion to compare and evaluate the performance of FOMs,
as it has been widely utilized as a widely accepted FOM indicator [67,68]. Higher FOM means
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1792

Fig. 5. Shows the FOMs for angular scanning detection scheme: (a) FOM1 calculated
using Eq. (4), (b) FOM2 calculated using Eq. (5), (c) FOM3 calculated using Eq. (6), and (d)
FOM4 calculated using Eq. (7).

Table 1. Quantitative sensing performance parameters and the FOMs for operating positions in
Fig. 3 and 5.
Operating position
Parameters A B C D E
λ (nm) 1900 1900 1835 720 629
d (nm) 80 26 40 52.5 80
FWHM 9.61×10−4 3.4×10−3 1.6×10−3 1.05×10−2 1.7×10−2
∆I 0.04 0.99 0.78 0.94 0.22
Isp 0.90 3.63×10−4 0.20 8.18×10−7 0.67
sinθsp (ns = 1.33) 0.88 0.88 0.88 0.92 0.95
S (RIU−1 ) 0.67 0.67 0.67 0.75 0.82
DR (RIU) 1.51 1.51 1.51 1.43 1.38
FOM1 694.93(1st ) 198.39(3rd ) 406.70(2nd ) 71.47(4th ) 48.51(5th )
FOM2 28.09(4th ) 195.77(2nd ) 315.30(1st ) 67.43(3rd ) 10.71(5th )
FOM3 768.17(4th ) 5.47×105 (2nd ) 2079.50(3rd ) 2.05×108 (1st ) 72.57(5th )
FOM4 143.3(4th ) 1428(2nd ) 538.5(3rd ) 2811(1st ) 25.2(5th )

that the SPR can measure a lower refractive index range, in other words, inverse relationship to
the LoD. The LoD was computed for the operating position assuming that the total reflectance
beam energy of 5000 pJ was captured using 1080 pixels by 720 pixels with the quantum efficiency
of 60%. Of course, one can increase the number of pixels or employ a higher well depth camera
leading to an LoD improvement. These, however, only change the value of the LoD, not the shape
of the LoD contour, as shown in Fig. 6(a). Fig. 6(b) to Fig. 6(e) show the inverse FOM1 , FOM2 ,
FOM3 , and FOM4 , respectively. The FOM1 and the FOM2 cannot provide a good representation
of the LOD.
On the other hand, the inverse of FOM3 and FOM4 can provide a similar pattern to the LoD.
The reciprocal of FOM4 can provide a more similar pattern to the LoD. Here, the structural
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1793

Fig. 6. (a) the LoD for all the operating conditions calculated for 5000 pJ optical energy, (b)
1/FOM1 , (c) 1/FOM2 , (d) 1/FOM3 , and (e) 1/FOM4

similarity index (SSI) [69] was computed comparing the similarity between the LoD and the four
reciprocal FOMs giving the SSIM of 53.42%, 77.11%, 83.12%, and 95.62%, respectively. The
FOM4 performed better than the other FOMs because the FOM4 took sufficient optical intensity
information into account compared to the other FOMs. The following section will be shown and
discussed through machine learning and the PCA that the parameters that can contribute to the
LoD and FOM are the S, the FWHM, the ∆I, and the Isp .

3.4. PCA and machine learning


In this section, the sensing performance parameters S, FWHM, ∆I, Isp , DR, and LoD were
converted from their two-dimensional contour to a 1D array and formed a data table with the
array dimension 10,201 rows and six columns. The tabulated data were then modeled using
the following ML models: linear regression, stepwise linear regression, tree, support vector
machine (SVM), ensemble, and Gaussian process regression (GPR), as shown in Table 2. The
root-mean-square error (RMSE) was calculated using five-fold cross-validation of all models.
For the gold SPR responses, the GPR model provided the highest accuracy model with Matern
5/2 GPR algorithm with the lowest RMSE of 0.86%.
The PCA was then employed to identify which of S, FWHM, ∆I, Isp , and DR contributed to the
model by 97.8%, 1.9%, 0.2%, 0.1%, and 0.0%, respectively. Note that the PCA is a mathematical
modeling approach to exclude parameters that contribute less to the model. Here, the statistical
confidence of the PCA was 95% for the analysis. Therefore, the only four factors contributing
to the LoD are S, FWHM, ∆I, and Isp . Although the latter two parameters are less significant
than the first two, they will be included in the formulation process in the next section. Here, the
effect of different numbers of performance parameters included in the ML model is demonstrated
by training the GPR model with the Matern 5/2 GPR algorithm using different performance
parameters included, as shown in Table 3. The predicted contour responses are shown in Fig. 7.
The GPR models trained using five, four, and three parameters can provide the contour that
agrees well with the LoD contour discussed in Fig. 6(a) in the earlier section.
In contrast, the two-parameters case has an artifact region at the higher plasmonic gold
thickness region, and the one-parameter case cannot represent the LoD contour. It is established
in artificial intelligence that the trained model can only be employed in the same range of the
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1794

Table 2. RMSE of ML models trained using the five predictors S, FWHM, ∆I,
Isp , DR to model the LoD response.

ML model Algorithm RMSE


Linear 3.92%
Linear regression Interactions linear 1.79%
Robust linear 4.20%
Stepwise linear regression Stepwise linear 1.81%
Fine tree 1.37%
Tree Medium tree 1.62%
Coarse tree 2.05%
Linear SVM 4.04%
Quadratic SVM 1.83%
Cubic SVM 4.41%
Support vector machine (SVM)
Fine Gaussian SVM 2.84%
Medium Gaussian SVM 1.43%
Coarse Gaussian SVM 2.68%
Boosted trees 4.19%
Ensemble
Bagged trees 1.34%
Gaussian process regression (GPR) Squared exponential GPR 0.91%
Matern 5/2 GPR 0.86%
Exponential GPR 0.87%
Rational quadratic GPR 0.87%

Fig. 7. shows LoD models trained using (a) 5 parameters, (b) 4 parameters, (c) 3 parameters,
(d) 2 parameters, and (e) 1 parameter.

training data; prediction outside the scope of the training data can lead to an unrealistic value
[70]. The last section will demonstrate this in predicting the LoD response of a higher loss
plasmonic material aluminum. Therefore, there is a need to work an analytical LoD or FOM
from the sensing parameters.
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1795

Table 3. RMSE of GPR model with Matern 5/2 GPR trained using different
performance parameters.
ML model Parameters RMSE
Gaussian Process Regression (GPR) S, FWHM, ∆I, Isp , DR 0.86%
Algorithm: Matern 5/2 GPR S, FWHM, ∆I, Isp 0.86%
PCA output: S, FWHM, ∆I 0.87%
S (97.8%), FWHM (1.9%), ∆I (0.2%), Isp S, FWHM 5.03%
(0.1%), DR (0.0%) S 10.44%

3.5. Proposed FOM formulation


Although the ML models can represent the shape of LoD contour, extracting an explicit equation
from the ML is problematic due to the complexity of the underlining mathematical model. As
discussed in the ML section above, the four parameters contributing to the LoD are S, FWHM,
Ic, and Isp . The four parameters were then included in Eq. (8) to formulate the proposed FOM by
varying the exponent variables j,k,m, and n and comparing the Eq. (8) with LoD contour in terms
of the SSI. Figure 8 shows the SSI responses comparing the LoD contour in Fig. 7(a) and Eq. (8)
with i and j variables ranging from −2 to 2, m, and n from 1 to 2. Fig. 8(a) shows the case with m
of 1 and n of 1. The maximum SSI of 95.62% appeared at j of 0.25, k of 0.5, m of 1, and n of 1,
respectively. The other m and n cases had a lower SSI value, as shown in Fig. 8(a-b). The SSI
contour enables us to formulate the proposed FOM as expressed in Eq. (7). It is essential to point
out that the expression was not derived directly from mathematical derivation, however, with the
aid of the PCA approach.
1 Isp j × FWHM m
LoD = = (8)
FOM ∆I k × Sn
Apply the generalized FOM to the other plasmonic metals

Fig. 8. Shows SSI responses comparing the LoD contour in Fig.7a and Eq. (8) with varying
I and j variables from −2 to 2 and (a) m = 1 and n = 1, (b) m = 2 and n = 1, (c) m = 1 and n = 2

To prove that the proposed FOM can predict the responses of plasmonic materials and other
sensor structures that require an angular interrogation measurement. Here, the following four
responses of plasmonic aluminum at four incident wavelengths λ of 1000 nm, 1200 nm, 1400 nm,
and 1600 nm were computed for their LoD when the metal thickness was varied from 10 nm to
45 nm. It is well known that aluminum is a lossier plasmonic material [71] than gold, silver,
and copper. Fig. 9(a) shows the normalized LoD of the four wavelengths calculated using the
shot-noise model and Monte Carlo simulation described in section 2.2. Note that the 1,500
iterations were insufficient to calculate a stable LoD response due to the high attenuation nature
of the SPs excited on the Al surface. Therefore, the LoD needs to be estimated using the FOM
expressions; otherwise, it is a time and computing resource-demanding task. Fig. 9(b) shows
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1796

normalized 1/FOM4 calculated using the proposed FOM in Eq. (7). It can be seen that the FOM4
can predict the performance of the plasmonic aluminum for all the investigated wavelengths.

Fig. 9. Shows SPR responses of Al for varying d from 10 nm to 45 nm at four incident


wavelengths λ of 1000 nm, 1200 nm, 1400 nm, and 1600 nm for (a) normalized LoD calculated
using shot-noise and Monte Carlo model, and (b) normalized 1/FOM4 .

The ML models can only be employed to predict the SPR responses that are similar to
the training cases; the aluminum SPR cases significantly differed from the gold SPR cases.
Fig. 10(a-e) shows the predicted LoD using the models trained in section 3.4. All the models,
even the one developed using five performance parameters, cannot provide a good estimation of
the LoD.

Fig. 10. Shows the LoD responses predicted using the GPR models with Matern 5/2 GPR
algorithm trained using (a) 5 performance parameters S, FWHM, ∆I, Isp and DR, (b) 4
performance parameters S, FWHM, ∆I and Isp , (c) 3 performance parameters S, FWHM
and ∆I, (d) 2 performance parameters S and FWHM, and (e) 1 performance parameter S.

Apply the generalized FOM to wavelength interrogation measurement


It is essential to point out that the proposed theoretical framework can be applied to optical
intensity detection of SPR for both the angular interrogation and the wavelength scanning
measurements. Figure 11 demonstrates the capability of the FOM4 in predicting the LoD
response for wavelength interrogation measuring the change in coupling plasmonic wavelength
λsp . Fig. 11(a) shows the LoD responses of Au when varying d from 35 nm to 80 nm at four fixed
incident angles sinθ0 of 0.900, 0.925, 0.950, and 0.975. Fig. 11(b) shows the 1/FOM4 responses
corresponding to each illumination angle. It can be seen that the proposed FOM4 can provide a
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1797

good estimation of the theoretical LoD calculated using the shot-noise model and Monte Carlo
simulation.

Fig. 11. Shows SPR responses of Au when varying d from 35 nm to 80 nm at four incident
angles sinθ0 0.900, 0.925, 0.950, and 0.975 for (a) normalized LoD calculated using
shot-noise and Monte Carlo model, and (b) normalized 1/FOM4 .

The limitation of the proposed FOM is that it is not applicable for phase measurement since
the phase detection differs from the intensity detection in terms of the nature and the noise
performance of an optical interferometer. It is established that the phase measurement is more
robust to the optical intensity noise than the amplitude or intensity measurement. In optical
interferometry, the SPR resonant wave vector is instead detected through the displacement of
interferent fringes; therefore, the optical intensity is not a crucial parameter. Kabashin et al.
[72] have experimentally validated and explained this point. Roland et al. [73] also reported a
similar finding when using a thinner plasmonic gold of 25 nm, which had lower ∆I contrast. They
imaged and located subwavelength nanoparticles with 10 nm to 200 nm diameter through SPR
phase imaging microscopy. Therefore, the FOM for the phase measurement does not depend
strongly on the optical intensity.

4. Conclusion
We have proposed a theoretical framework to quantify performance parameters for angular inter-
rogation based on surface plasmon resonance measurement under the conventional Kretschmann
configuration. The different figures of merit definitions and expressions are reported in the
literature. However, there was no direct comparison to evaluate and compare the figures of
merit. Here, the limit of detection calculated using the shot-noise model and Monte Carlo
simulation representing optical intensity noise and fluctuations typically found in a digital camera
was applied to compare the figures of merits. The figures of merit reported in the literature
cannot reasonably estimate the detection limit. Therefore, we proposed a generalized figure of
merit definition of sensitivity×intensity contrast0.5 /(full width at half maximum×intensity at the
plasmonic dip0.25 ), which can provide a good estimation of the detection limit. The proposed
figure of merit expression was developed using the principal component analysis to identify the
four performance parameters contributing to the figure of merit performance. The proposed
figure of merit can be employed to predict the SPR of higher-loss plasmonic material, including
aluminum.
Funding. The Research Institute of Rangsit University (RSU); the School of Engineering of King Mongkut’s Institute
of Technology Ladkrabang (KMITL).
Disclosures. The authors declare no conflicts of interest.
Data availability. Data underlying the results presented in this paper are not publicly available at this time but may
be obtained from the authors upon reasonable request.
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1798

References
1. M. G. Somekh and S. Pechprasarn, “Surface plasmon, surface wave, and enhanced evanescent wave microscopy,” in
Handbook of Photonics for Biomedical Engineering(Springer Netherlands, 2017), pp. 503–543.
2. J. Zhang, L. Zhang, and W. Xu, “Surface plasmon polaritons: physics and applications,” J. Phys. D: Appl. Phys.
45(11), 113001 (2012).
3. A. A. I. Sina, R. Vaidyanathan, A. Wuethrich, L. G. Carrascosa, and M. Trau, “Label-free detection of exosomes
using a surface plasmon resonance biosensor,” Anal. Bioanal. Chem. 411(7), 1311–1318 (2019).
4. P. Dawson, B. Puygranier, and J. Goudonnet, “Surface plasmon polariton propagation length: A direct comparison
using photon scanning tunneling microscopy and attenuated total reflection,” Phys. Rev. B 63(20), 205410 (2001).
5. A. M. Craciun, M. Focsan, K. Magyari, A. Vulpoi, and Z. Pap, “Surface plasmon resonance or biocompatibility—key
properties for determining the applicability of noble metal nanoparticles,” Materials 10(7), 836 (2017).
6. D. Lakayan, J. Tuppurainen, M. Albers, M. J. van Lint, D. J. van Iperen, J. J. Weda, J. Kuncova-Kallio, G. W. Somsen,
and J. Kool, “Angular scanning and variable wavelength surface plasmon resonance allowing free sensor surface
selection for optimum material-and bio-sensing,” Sens. Actuators, B 259, 972–979 (2018).
7. A. Paliwal, M. Tomar, and V. Gupta, “Refractive index sensor using long-range surface plasmon resonance with
prism coupler,” Plasmonics 14(2), 375–381 (2019).
8. M. Shen, S. Learkthanakhachon, S. Pechprasarn, Y. Zhang, and M. G. Somekh, “Adjustable microscopic measurement
of nanogap waveguide and plasmonic structures,” Appl. Opt. 57(13), 3453–3462 (2018).
9. S. Joseph, S. Sarkar, and J. Joseph, “Grating-Coupled Surface Plasmon-Polariton Sensing at a Flat Metal–Analyte
Interface in a Hybrid-Configuration,” ACS Appl. Mater. Interfaces 12(41), 46519–46529 (2020).
10. E. Kretschmann and H. Raether, “Radiative decay of non radiative surface plasmons excited by light,” Zeitschrift für
Naturforschung A 23(12), 2135–2136 (1968).
11. A. Otto, “Excitation of nonradiative surface plasma waves in silver by the method of frustrated total reflection,” Z.
Physik 216(4), 398–410 (1968).
12. S. Pechprasarn, S. Learkthanakhachon, G. Zheng, H. Shen, D. Y. Lei, and M. G. Somekh, “Grating-coupled Otto
configuration for hybridized surface phonon polariton excitation for local refractive index sensitivity enhancement,”
Opt. Express 24(17), 19517–19530 (2016).
13. M. Teran and M. A. Nugent, “Characterization of receptor binding kinetics for vascular endothelial growth factor-A
using SPR,” Anal. Biochem. 564-565, 21–31 (2019).
14. P. Singh, “SPR biosensors: historical perspectives and current challenges,” Sensors and actuators B: Chemical 229,
110–130 (2016).
15. A. A. Dormeny, P. A. Sohi, and M. Kahrizi, “Design and simulation of a refractive index sensor based on SPR and
LSPR using gold nanostructures,” Results Phys. 16, 102869 (2020).
16. P. Bhatia and B. D. Gupta, “Surface-plasmon-resonance-based fiber-optic refractive index sensor: sensitivity
enhancement,” Appl. Opt. 50(14), 2032–2036 (2011).
17. Y. Wang, Z. Ye, C. Si, and Y. Ying, “Subtractive inhibition assay for the detection of E. coli O157: H7 using surface
plasmon resonance,” Sensors 11(3), 2728–2739 (2011).
18. Ö Torun, İH Boyacı, E. Temür, and U. Tamer, “Comparison of sensing strategies in SPR biosensor for rapid and
sensitive enumeration of bacteria,” Biosens. Bioelectron. 37(1), 53–60 (2012).
19. P. Suvarnaphaet and S. Pechprasarn, “Enhancement of long-range surface plasmon excitation, dynamic range and
figure of merit using a dielectric resonant cavity,” Sensors 18(9), 2757 (2018).
20. S. A. Abayzeed, R. J. Smith, K. F. Webb, M. G. Somekh, and C. W. See, “Sensitive detection of voltage transients
using differential intensity surface plasmon resonance system,” Opt. Express 25(25), 31552–31567 (2017).
21. H.-M. Tan, S. Pechprasarn, J. Zhang, M. C. Pitter, and M. G. Somekh, “High resolution quantitative angle-scanning
widefield surface plasmon microscopy,” Sci. Rep. 6(1), 1–11 (2016).
22. K. Thadson, S. Visitsattapongse, and S. Pechprasarn, “Deep learning-based single-shot phase retrieval algorithm
for surface plasmon resonance microscope based refractive index sensing application,” Sci. Rep. 11(1), 16289–14
(2021).
23. A. I. Pérez-Jiménez, D. Lyu, Z. Lu, G. Liu, and B. Ren, “Surface-enhanced Raman spectroscopy: benefits, trade-offs
and future developments,” Chem. Sci. 11(18), 4563–4577 (2020).
24. D. Wrapp, N. Wang, K. S. Corbett, J. A. Goldsmith, C.-L. Hsieh, O. Abiona, B. S. Graham, and J. S. McLellan,
“Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation,” Science 367(6483), 1260–1263 (2020).
25. S. N. Walker, N. Chokkalingam, E. L. Reuschel, M. Purwar, Z. Xu, E. N. Gary, K. Y. Kim, M. Helble, K. Schultheis,
and J. Walters, “SARS-CoV-2 assays to detect functional antibody responses that block ACE2 recognition in
vaccinated animals and infected patients,” J. Clin. Microbiol. 58(11), e01533 (2020).
26. J. Tang, S. Ravichandran, Y. Lee, G. Grubbs, E. M. Coyle, L. Klenow, H. Genser, H. Golding, and S. Khurana,
“Antibody affinity maturation and plasma IgA associate with clinical outcome in hospitalized COVID-19 patients,”
Nat. Commun. 12(1), 1–13 (2021).
27. S.-A. Kim, S.-J. Kim, S.-H. Lee, T.-H. Park, K.-M. Byun, S.-G. Kim, and M. L. Shuler, “Detection of avian
influenza-DNA hybridization using wavelength-scanning surface plasmon resonance biosensor,” J. Opt. Soc. Korea
13(3), 392–397 (2009).
28. Y. Zeng, J. Zhou, X. Wang, Z. Cai, and Y. Shao, “Wavelength-scanning surface plasmon resonance microscopy: A
novel tool for real time sensing of cell-substrate interactions,” Biosens. Bioelectron. 145, 111717 (2019).
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1799

29. R. Zhang, S. Pu, and X. Li, “Gold-film-thickness dependent SPR refractive index and temperature sensing with
hetero-core optical fiber structure,” Sensors 19(19), 4345 (2019).
30. D. Lakayan, J. Tuppurainen, T. E. Suutari, D. J. van Iperen, G. W. Somsen, and J. Kool, “Design and evaluation of a
multiplexed angular-scanning surface plasmon resonance system employing line-laser optics and CCD detection in
combination with multi-ligand sensor chips,” Sens. Actuators, B 282, 243–250 (2019).
31. D. Wang, F.-C. Loo, H. Cong, W. Lin, S. K. Kong, Y. Yam, S.-C. Chen, and H. P. Ho, “Real-time multi-channel SPR
sensing based on DMD-enabled angular interrogation,” Opt. Express 26(19), 24627–24636 (2018).
32. S. B. Ahangar, V. Konduru, J. S. Allen, N. Miljkovic, S. H. Lee, and C. K. Choi, “Development of automated
angle-scanning, high-speed surface plasmon resonance imaging and SPRi visualization for the study of dropwise
condensation,” Exp. Fluids 61(1), 12–15 (2020).
33. Z. H. Mohammed, “The fresnel coefficient of thin film multilayer using transfer matrix method tmm,” in IOP
Conference Series: Materials Science and Engineering(IOP Publishing2019), p. 032026.
34. D. Fu, W. Choi, Y. Sung, S. Oh, Z. Yaqoob, Y. Park, R. R. Dasari, and M. S. Feld, “Ultraviolet refractometry using
field-based light scattering spectroscopy,” Opt. Express 17(21), 18878–18886 (2009).
35. S. Priya, R. Laha, and V. R. Dantham, “Wavelength-dependent angular shift and figure of merit of silver-based
surface plasmon resonance biosensor,” Sens. Actuators, A 315, 112289 (2020).
36. A. Shalabney and I. Abdulhalim, “Figure-of-merit enhancement of surface plasmon resonance sensors in the spectral
interrogation,” Opt. Lett. 37(7), 1175–1177 (2012).
37. S. Sasivimolkul, S. Pechprasarn, and M. G. Somekh, “Analysis of open grating-based Fabry–Pérot resonance
structures with potential applications for ultrasensitive refractive index sensing,” IEEE Sens. J. 21(9), 10628–10636
(2021).
38. L. Huang, H. Tian, D. Yang, J. Zhou, Q. Liu, P. Zhang, and Y. Ji, “Optimization of figure of merit in label-free
biochemical sensors by designing a ring defect coupled resonator,” Opt. Commun. 332, 42–49 (2014).
39. Q.-Q. Meng, X. Zhao, C.-Y. Lin, S.-J. Chen, Y.-C. Ding, and Z.-Y. Chen, “Figure of merit enhancement of a surface
plasmon resonance sensor using a low-refractive-index porous silica film,” Sensors 17(8), 1846 (2017).
40. M. Cao, M. Wang, and N. Gu, “Optimized surface plasmon resonance sensitivity of gold nanoboxes for sensing
applications,” J. Phys. Chem. C 113(4), 1217–1221 (2009).
41. J. Ye and P. Van Dorpe, “Improvement of figure of merit for gold nanobar array plasmonic sensors,” Plasmonics 6(4),
665–671 (2011).
42. K. M. Byun, S. J. Yoon, and D. Kim, “Effect of surface roughness on the extinction-based localized surface plasmon
resonance biosensors,” Appl. Opt. 47(31), 5886–5892 (2008).
43. A. Sinibaldi, N. Danz, E. Descrovi, P. Munzert, U. Schulz, F. Sonntag, L. Dominici, and F. Michelotti, “Direct
comparison of the performance of Bloch surface wave and surface plasmon polariton sensors,” Sens. Actuators, B
174, 292–298 (2012).
44. M. Zekriti, “Temperature effects on the resolution of surface-plasmon-resonance-based sensor,” Plasmonics 14(3),
763–768 (2019).
45. S. M. A. Uddin, S. S. Chowdhury, and E. Kabir, “Numerical analysis of a highly sensitive surface plasmon resonance
sensor for sars-cov-2 detection,” Plasmonics 16(6), 2025–2037 (2021).
46. X. L. Zhou, Y. Yang, S. Wang, and X. W. Liu, “Surface plasmon resonance microscopy: From single-molecule
sensing to single-cell imaging,” Angew. Chem. Int. Ed. 59(5), 1776–1785 (2020).
47. W. Zhu, Q. Huang, Y. Wang, E. Lewis, and M. Yang, “Enhanced sensitivity of heterocore structure surface plasmon
resonance sensors based on local microstructures,” Opt. Eng. 57(07), 1 (2018).
48. Y. Ji, C. Tang, N. Xie, J. Chen, P. Gu, C. Peng, and B. Liu, “High-performance metamaterial sensors based on strong
coupling between surface plasmon polaritons and magnetic plasmon resonances,” Results Phys. 14, 102397 (2019).
49. P. B. Johnson and R.-W. Christy, “Optical constants of the noble metals,” Phys. Rev. B 6(12), 4370–4379 (1972).
50. S. Pechprasarn and M. G. Somekh, “Detection limits of confocal surface plasmon microscopy,” Biomed. Opt. Express
5(6), 1744–1756 (2014).
51. X. Wang, M. Jefferson, P. C. Hobbs, W. P. Risk, B. E. Feller, R. D. Miller, and A. Knoesen, “Shot-noise limited
detection for surface plasmon sensing,” Opt. Express 19(1), 107–117 (2011).
52. X. Liu, Y. Zhang, S. Wang, C. Liu, T. Wang, Z. Qiu, X. Wang, G. I. Waterhouse, C. Xu, and H. Yin, “Performance
comparison of surface plasmon resonance biosensors based on ultrasmall noble metal nanoparticles templated using
bovine serum albumin,” Microchem. J. 155, 104737 (2020).
53. Y.-C. Cheng, Y.-J. Chang, Y.-C. Chuang, B.-Z. Huang, and C.-C. Chen, “A plasmonic refractive index sensor with an
ultrabroad dynamic sensing range,” Sci. Rep. 9(1), 5134 (2019).
54. R. Li, D. Wu, Y. Liu, L. Yu, Z. Yu, and H. Ye, “Infrared plasmonic refractive index sensor with ultra-high figure of
merit based on the optimized all-metal grating,” Nanoscale Res. Lett. 12(1), 1–6 (2017).
55. R. Alharbi, M. Irannejad, and M. Yavuz, “A short review on the role of the metal-graphene hybrid nanostructure in
promoting the localized surface plasmon resonance sensor performance,” Sensors 19(4), 862 (2019).
56. S. Ge, F. Shi, G. Zhou, S. Liu, Z. Hou, and L. Peng, “U-shaped photonic crystal fiber based surface plasmon resonance
sensors,” Plasmonics 11(5), 1307–1312 (2016).
57. K. Ahmed, M. A. Jabin, and B. K. Paul, “Surface plasmon resonance-based gold-coated biosensor for the detection
of fuel adulteration,” J. Comput. Electron. 19(1), 321–332 (2020).
Research Article Vol. 13, No. 4 / 1 Apr 2022 / Biomedical Optics Express 1800

58. L. Peng, F. Shi, G. Zhou, S. Ge, Z. Hou, and C. Xia, “A surface plasmon biosensor based on a D-shaped microstructured
optical fiber with rectangular lattice,” IEEE Photonics J. 7(5), 1–9 (2015).
59. N. Chen, M. Chang, X. Lu, J. Zhou, and X. Zhang, “Numerical analysis of midinfrared D-shaped photonic-crystal-fiber
sensor based on surface-plasmon-resonance effect for environmental monitoring,” Appl. Sci. 10(11), 3897 (2020).
60. A. Bijalwan, B. K. Singh, and V. Rastogi, “Surface plasmon resonance-based sensors using nano-ribbons of graphene
and WSe2,” Plasmonics 15(4), 1015–1023 (2020).
61. E. Bernal and X. Guo, “Limit of detection and limit of quantification determination in gas chromatography,” Advances
in gas chromatography 3, 57–63 (2014).
62. M. Shen and M. G. Somekh, “A general description of the performance of surface plasmon sensors using a
transmission line resonant circuit model,” IEEE Sens. J. 19(23), 11281–11288 (2019).
63. B. Doiron, M. Mota, M. P. Wells, R. Bower, A. Mihai, Y. Li, L. F. Cohen, N. M. Alford, P. K. Petrov, and R. F.
Oulton, “Quantifying figures of merit for localized surface plasmon resonance applications: a materials survey,” Acs
Photonics 6(2), 240–259 (2019).
64. F. Allegrini and A. C. Olivieri, “IUPAC-consistent approach to the limit of detection in partial least-squares
calibration,” Anal. Chem. 86(15), 7858–7866 (2014).
65. S. Pechprasarn, T. W. Chow, and M. G. Somekh, “Application of confocal surface wave microscope to self-calibrated
attenuation coefficient measurement by Goos-Hänchen phase shift modulation,” Sci. Rep. 8(1), 8547 (2018).
66. B. A. Prabowo, I. D. P. Hermida, R. V. Manurung, A. Purwidyantri, and K.-C. Liu, “Nano-film aluminum-gold for
ultra-high dynamic-range surface plasmon resonance chemical sensor,” Front. Optoelectron. 12(3), 286–295 (2019).
67. K. Lodewijks, W. Van Roy, G. Borghs, L. Lagae, and P. Van Dorpe, “Boosting the figure-of-merit of LSPR-based
refractive index sensing by phase-sensitive measurements,” Nano Lett. 12(3), 1655–1659 (2012).
68. Y. Zhou, X. Li, S. Li, Z. Guo, P. Zeng, J. He, D. Wang, R. Zhang, M. Lu, and S. Zhang, “Symmetric guided-mode
resonance sensors in aqueous media with ultrahigh figure of merit,” Opt. Express 27(24), 34788–34802 (2019).
69. R. Dosselmann and X. D. Yang, “A comprehensive assessment of the structural similarity index,” SIViP 5(1), 81–91
(2011).
70. M. Lovrić, K. Pavlović, P. Žuvela, A. Spataru, B. Lučić, R. Kern, and M. W. Wong, “Machine learning in prediction of
intrinsic aqueous solubility of drug-like compounds: Generalization, complexity, or predictive ability?” J. Chemom.
35(1), e3349 (2021).
71. W. Li, K. Ren, and J. Zhou, “Aluminum-based localized surface plasmon resonance for biosensing,” TrAC Trends in
Analytical Chemistry 80, 486–494 (2016).
72. A. V. Kabashin, S. Patskovsky, and A. N. Grigorenko, “Phase and amplitude sensitivities in surface plasmon resonance
bio and chemical sensing,” Opt. Express 17(23), 21191–21204 (2009).
73. T. Roland, L. Berguiga, J. Elezgaray, and F. Argoul, “Scanning surface plasmon imaging of nanoparticles,” Phys. Rev.
B 81(23), 235419 (2010).

You might also like