Biomolecules Theory Module-6-3
Biomolecules Theory Module-6-3
In Chapter Examples.............................................................. 08
Solved Examples ................................................................... 12
CHO
Monosaccharides Oligosaccharides Polysaccharides |
(CHOH) 4
|
2.1 Monosaccharides
CH2 OH
(a) In it n = 3 to 7
(b) There naming is of following type-
Evidences that support the linear structure of Glucose
n Formula Group Aldolase Ketose
n = 3 C3H6O 3 Triose Glyceralde- Dihydroxy 1. Reduction
hyde acetone. Ni
HOH2C . (CHOH)4 . CHO + H2
n = 4 C4H8O 4 Tetrose Erythrose Erythrulose Glucose HOCH2.(CHOH)4 . CH2OH
n = 5 C5H10O 5 Pentose Ribose Ribulose
Sorbitol
n = 6 C6H12O 6 Hexose Glucose Fructose.
3. Oxidation
GLUCOSE (C6H12O6) -
Br / H O
Glucose is an aldohexose. It is monomer of many HOH2C . (CHOH)4 . CHO + [O] 2 2
of the larger carbohydrates such as starch, cellulose. Glucose HOCH2 .(CHOH)4 . COOH
Gluconic acid
Preparation of Glucose
4. Acetylation
1. By Hydrolysis of Cane-sugar
OHC . (CHOH)4 . CH2OH + 5Ac2O
In laboratory glucose can be prepared by hydrolysis Glucose Acetic anhydride
of cane-sugar in the prsence of alcohol using dilute
OHC. (CHOAc)4. CH2OAc
hydrochloric acid. Glucose and fructose are formed
Pentaacetyl glucose
in equal amounts. Glucose, being less soluble in
ethyl alcohol than fructose, crystallizes out.
5. Formation of Osazone written as:
C 6 H 5 NHNH 2
( excess )
H 2O
HCN
(Fischer formula)
Structure of Fructose
Fructose has the molecular formula C6H12O6 and
on the basis of its reactions it was found to contain
a ketonic functional group at C—2 and six carbon
atoms in straight chain as in case of glucose.
It belongs to D-series and is a laevorotatory
compound. Therefore, fructose is correctly named
as D-(–)-fructose. Its open chain structure may be
Isomerism glycosidic bond.
Carbohydrates which differ in configuration at the
glycosidic carbon (i.e. C1 in aldoses and C2 in Some Important Disaccharides
ketoses) are called anomers.For example, -D-
(i) Maltose = Glucose + Glucose
glucose and -D-glucose are anomers since
they differ in configuration at C 1 (glycosidic
carbon).
Carbohydrates which differ in configuration at any
H CH2OH H H CH2OH OH
carbon other than glycosidic carbon are called
epimers. For example glucose and mannose are C O C O
called epimers since they differ in configuration H H
C H C1 4C
H C
at C2 (glycosidic carbon) while glucose and OH OH
galactose are called epimers since they differ in C C C C
O
configuration at C4 (other than the glycosidic HO H
H OH H OH
carbon).
atoms.
4.4.2 Secondary Structure :
(g) In Glycine chiral carbon atom is absent. It is In it structure of straight chain from irregular
optically inactive. changes to form coils.
(h) L-form synthesize protein. H-bond + peptide bond present in secondary.
structure.
4.3 Peptide bond : This H bond is present between hydrogen of
Amino group and oxygen atom carboxylic
(a) Two or more than two amino acid linked and form acid group.
a peptide.
This structure is of two types
(b) The bond present in between peptides is called
peptide bond.
It is of 3 types -helix - pleated sheet
|
C = O........H — N —
| | Fibrous Globular
H (A) Fibrous :
Hydrogen bond
It is insoluble
They are formed between oxygen of acidic
amino acid and H of basic amino acid. It is of elongated shape.
(ii) Hydrophobic bond - It is highly resistant to digestion by proteolytic
Non - polar side chains of neutral amino acid enzymes.
tends to be closely associated with one Their main function - Protection.
another in proteins. Ex. Collagen, Keratin etc
Present in between the amino Acid. (B) Globular :
These are not true bonds.
These are spherical and oval in shape.
(iii) lonic bond : Chains are highly coiled
– COO–.....H3+N– These are soluble.
Ionic bond Ex. Albumin
These are salt bonds formed between
oppositely charged groups in side chains of 4.5.2 Conjugated Proteins
Amino acids These are complex proteins in which protein
Eg. Aspartic acid molecule is combined with characteristic non-
amino acid substance.
Glutamic acid
Non-amino acid or Non - Protein part is called
(iv) Disulphide bonds : as prosthetic group
| ------ S - S ---- | Ex. Nucleoproteins
Relatively stable bond and thus is not broken (Protein + Nucleic acid),
readily under usual conditions of denaturation.
Phosphoproteins (Protein + (PO3)2– )
Formed between the -SH group of Amino acid Eg. Casein of milk., Vitelline of egg - yolk
Ex.Cystine and Methionine .
4.4.4 Quaternary structure : 4.5.3 Derived proteins :
When 2 or more polypeptide chains united
by forces other than covalent bonds (i.e. not (a) These are obtained as a result of partial
peptide and disulphide bonds) are called hydrolysis of natural proteins.
Quaternary structure.
Eg. Proteose, Metaproteins, Peptones
It is most stable structure.
(b) Denaturation of Proteins
Ex. Haemoglobin
When a protein in its native form, is subjected to a
physical change like change in temperature, or a 5. NUCLEIC ACID
chemical change like change in pH, the native
(a) These are special type of acids which are present
conformation of the molecule is disrupted and
in nucleus & cytoplasm.
proteins so formed are called denaturated proteins.
(b) Control the metabolic activities of cell.
The denaturation may be reversible or irreversible. (c) They are also found in Mitochondria, centriole
The coagulation of egg on boiling is an example of and chloroplast.
irreversible protein denaturation. Types These are of 2 types
However, it has been shown now that in some cases, DNA (Deoxyribonucleic acid)
the process is actually reversible. The reverse
process is called renaturation. RNA (Ribonucleic acid)
10-15% of the total RNA. (b) With having tertiary structure it can be collected
as crystals.
Size - Smallest 75 - 80 nucleotides only.
Synthesis - Within nucleus from DNA. Enzymes are denatured at higher temperature.
Function- It transport amino acid from cyto (c) Enzyme can be stored at low temperature as
plasm to the site of protein synthesis. they are inactivated.
Examples 6.2 Importance of enzymes
based on Nucleic acid
In the thousands of enzymes presents in body if
Ex.5 Which of the following sugar is present in even a single enzyme would be absent or
R.N.A.- damaged than complex disease in results.
(A) Ribose (B) Deoxyribose
eg. Scarcity of Phenylalanine hydroxylase
(C) Both (D) None Ans. (A) enzyme in human body is result in
Sol. Ribose C5H10O 5 Phenylketonuria disease.
6.3 Factors affecting enzyme action : 7. NUTRIENTS
(i) Optimum temperature and pH. Enzyme catalysed Sodium, Potassium and Chlorine
reactions have maximum rate at physiological pH
(i) Na+ is the principal mineral cation in the extracellular
of around 7.4 and human body temperature of 37ºC
fluid.
(310 K) under one atmosphere pressure.
In fact, as the temperatue or pH is increased, the (ii) K+ is the principal cation inside the cell.
rate rises to a maximum (at 37ºC or pH = 7.4) and (iii) Cl– is the principal mineral anion in the ECF.
then falls off.
(iv) Na+ and K+ are essential to the maintenance of water
(ii) Enzyme activators (co-enzymes). The balance and acid-base balance.
activity of certain enzymes is increased in the
presence of certain substances, called co-enzymes. (v) Na + and K + are important in nerve impulse
transmission.
It has been observed that if a protein contains a
small amount of vitamin as the non-protein part, its Calcium and Phosphorus
activity is enhanced considerably. The activators are
(i) Calcium and phosphorus are deposited in bones and
generally metal ions such as Na+, Mn2+, Cu2+, Co2+
teeth to give them strength and rigidity.
etc. These metal ions are weakly bonded to the
enzyme molecules and increase their catalytic (ii) Ca 2+ is also essential for blood coagulation,
activity. For example, the enzyme, amylase, in neuromuscular function, cardiac function and actions
presence of NaCl, which provides Na+ ion, shows a of many enzymes and hormones.
very high catalytic activity. (iii) Phosphorus enters into many compounds such
(iii) Enzyme inhibitors and poisons. Just as in the as nucleic acids and phospholipids, many
case of catalysts, the activity of enzyme is slowed coenzymes and high energy compounds like
ATP.
down in the presence of certain substance. Such
substances are called inhibitors or poisons. They (iv) Calcium plays an essential role in sustaining
act by combining with the active functional group intestinal peristalsis and growth of body tissues.
thereby reducing or completely destroying the
Iron
catalytic activity of the enzymes. The use of many
drugs is on account of thier action as enzyme (i) Iron is required for haemoglobin synthesis.
inhibitors in our body. (ii) Iron is essential both for transportation of
Examples oxygen to tissues and for operation of oxidative
based on Enzyme
systems within the tissue cells.
Ex.7 Enzyme is made up of - Magnesium
(A) Proteins (B) Minerals
(i) Magnesium is required as a catalyst for many
(C) Oil (D) Fatty acids intracellular enzymatic reactions, particularly
Ans(A) those relating to carbohydrate metabolism.
Sol. All enzymes are proteins (ii) Mg is the central metal atom in chlorophyll
Iodine
Ex .8 The enzyme which catalyses hydrolysis of
sucrose is- Iodine is used in the synthesis of thyroid hormones.
(A) Maltase (B) Zymase Zinc
(C) Invertase (D) Proteinase
(i) Zinc is a constituent of carbonic anhydrase,
Ans(C) present in RBCs helping in CO2 transport.
Sol. Hydrolysis of sucrose is called inversion. (ii) Zinc is a component to lactic dyhydrogenase,
important for the interconversion between pyruvic
acid and lactic acid Some important vitamins, their sources and
diseases caused by their deficiency are listed in
(iii) Zinc is a component part of some peptidases
table.
and therefore is important for digestion of proteins
in the alimentary canal
Sr. Name of Source Deficiency
Cobalt No Vitamins Diseases
(i) Cobalt helps in erythropoiesis and in the .
activities of some enzymes. 1 Vitamin A Fish liver Xerophthalmia
(Retinol) oil, carrots, (hardening of
(ii) It is present in vitamin B12 . butter and cornea of eye)
Copper milk Night blindness
2 Vitamin B1 Yeast, milk, Beri beri (loss of
(i) Copper helps in the utilisation of iron. Green appetite,
(Thiamine)
(ii) Copper deficiency may produce anaemia vegetables retarded growth)
because of failure in iron utilisation. and cereals
and grams
Molybdenum
(i) Molybdenum is a constituent of oxidase
enzymes (xanthine oxidase) 3 Vitamin B2 Milk, Cheilosis
(Riboflavin) eggwhite, (fissuring at
(ii) Molybdenum plays an important role in
liver, Kidney corners of
biological nitrogen fixation
mouth and lips),
Fluorine digestive
disorders and
(i) Fluorine maintains normal dental enamel and
burning
prevents dental caries.
sensation of the
(ii) Exessive intake of fluorine cause fluorosis skin
characterized by mottled teeth and enlarged 4 Vitamin B6 Yeast, milk, Convulsions
bones. (Pyridoxine) egg yolk,
cereals
and grams
8. VITAMINS
It has been observed that certain organic compounds 5 Vitamin B12 Meat, fish, Pernicious
are required in small amounts in our diet but their (Cyanocobal- egg and anaemia (RBC
deficiency causes specif ic diseases. These amine) curd deficient in
compounds are called vitamins. haemoglobin)
6 Vitamin C Citrus fruits, scurvy (bleeding
Classification of Vitamins
(Ascorbic amla and gums)
Vitamins are classified into two groups depending acid) green leafy
upon their solubility in water or fat. vegetables
(i) Fat soluble vitamins:
7 Vitamin D Exposure to Rickets (bone
Vitamins which are soluble in fat and oils. But (Calciferol) sunlight, deformities in
insoluble in water are kept in this group. These are fish children) and
vitamins A, D, E and K. They are stored in liver and and egg osteo-malacia
adipose (fat storing) tissues. yolk (soft bones and
(ii) Water soluble vitamins: joint pain in
adults)
B group vitamins and vitamin C are soluble in water
so they are grouped together. Water soluble vitamins
must be supplied regularly in diet because they are
readily excreted in urine and can not be stored
(except vitamin B12) in our body.
SOLVED EXAMPLES
Ex.1 Which of the following is not a reducing sugar- Ex.6 The simplest amino acid is-
(A) Glucose (B) Sucrose (A) Glycine (B) Alanine
(C) Mannose (D) Fructose Ans. (B) (C) Guanine (D) All the above
Sol. Sucrose is not a reducing sugar because it does Ans. (A)
not reduce fehling’s solution.
Sol. Simplest amino acid is glycine (amino acetic
Ex.2 Which one of the following is the reagent used acid H2 N– CH2 – COOH).
to identify glucose-
(A) Neutral ferric chloride Ex.7 The main structural feature of protein is–
(B) Chloroform and alcoholic KOH (A) Ester linkage (B) Ether linkage
(C) Ammonical silver nitrate (C) Peptide linkage (D) All of these
(D) Sodium ethoxide Ans. (C) Ans. (C)
Sol. Ammonical silver nitrate (Tollen’s reagent) Sol. The main structural feature of proteins is the
oxidises glucose to gluconic acid and itself presence of peptide linkage.
reduced to metallic silver.
Ex.3 Following is/are the oligosaccharides- Ex.8 The primary structure of a polypeptide is
determined by-
(A) Glucose (B) Sucrose
(A) The numer of disulphite bonds in the
(C) Lactose (D) Cellulose polypeptide
Ans. (B,C) (B) The number of amino acids in the polypeptide
Sol. Oligosaccharides are the compounds which give (C) The order of amino acids in the polypeptide
2 to 10 monosaccharides on hydrolysis. For
example - sucrose, lactose, maltose etc (D) The length of the polypeptide
Ans. (C)
Ex.4 N C group is characteristic of - Sol. The primary structure of a polypeptide is the
| || information of order of different amino acids in
H O that polypeptide.
(A) Cellulose (B) Nucleic acid
Ex.9 DNA molecule consists of units of-
(C) Proteins (D) Phospholipids
(A) Base–sugar
Ans. (C)
(B) Base – sugar– phosphate
N C (C) Base – phosphate
Sol. Peptide bond | || is characteristic of
H O (D) None of these Ans. (B)
proteins. Sol. DNA has nucleotide unit, i.e., Sugar + base +
H3 PO4 .
Ex.5 The pH value of a solution in which a polar amino Ex.10 The process of formation of RNA from DNA is
acid does not migrate under the influence of known as-
electric field is called-
(A) Translation (B) Transcription
(A) Isoelectronic point
(C) Replication (D) Mutation
(B) Isoelectric point
Ans. (B)
(C) Neutralisation point
Sol. The process of formation of RNA from DNA is
(D) None Ans. (B) called transcription.
Sol. Isoelectric point is the pH at which structure of
amino acid has no charge.
Ex.11 The organic compound which will answer
Fehling’s solution test is-
(A) Ethanol (B) Acetone
(C) Maltose (D) Benzaldehyde
Ans. (C)
Sol. Maltose, being reducing sugar, reduces Fehling
solution.