9/13/2021 Crop 3-D image - MATLAB imcrop3 - MathWorks India
imcrop3
Crop 3-D image
Syntax
Vout = imcrop3(V,cuboid)
Description
Vout = imcrop3(V,cuboid)
crops the image volume V according to cuboid,
which specifies the size example
and position of the cropping window in spatial coordinates.
Examples collapse all
Crop 3-D Volume
Load a 3-D volume into the workspace.
Try This Example
View MATLAB Command
D = load('mristack');
V = D.mristack;
Display the image.
fullViewPnl = uipanel(figure,'Title','Original Volume');
volshow(V,'Parent',fullViewPnl);
Crop the volume using imcrop3, specifying the size and position of the cuboidal crop region.
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9/13/2021 Crop 3-D image - MATLAB imcrop3 - MathWorks India
Vout = imcrop3(V,[30 40 10 100 100 10]);
Display the cropped image.
fullViewPnl = uipanel(figure,'Title','Cropped Volume');
volshow(Vout,'Parent',fullViewPnl);
Crop 3-D Image Volume Using Fixed Off-Center Spatial Extent
Load a 3-D MRI image. Use the squeeze function to remove any singleton
dimensions. Try This Example
View MATLAB Command
S = load('mri.mat','D');
volumeData = squeeze(S.D);
Display the image.
fullViewPnl = uipanel(figure,'Title','Original Volume');
volshow(volumeData,'Parent',fullViewPnl);
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9/13/2021 Crop 3-D image - MATLAB imcrop3 - MathWorks India
Create a Cuboid object and specify the cropping window size in all three dimensions.
c = images.spatialref.Cuboid([30,90],[30,90],[1,20]);
Crop the image based on the Cuboid dimensions.
croppedVolume = imcrop3(volumeData,c);
Display the cropped image.
fullViewPnl = uipanel(figure,'Title','Cropped Volume');
volshow(croppedVolume,'Parent',fullViewPnl);
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9/13/2021 Crop 3-D image - MATLAB imcrop3 - MathWorks India
Center Crop 3-D Image to Target Size
Load a 3-D MRI image. Use the squeeze function to remove any singleton
dimensions. Try This Example
View MATLAB Command
load mri;
D = squeeze(D);
Display the image.
fullViewPnl = uipanel(figure,'Title','Original Volume');
volshow(D,'Parent',fullViewPnl);
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9/13/2021 Crop 3-D image - MATLAB imcrop3 - MathWorks India
Specify the target size of the cropping window.
targetSize = [64 64 10];
Create a center cropping window that crops the specified image from its center.
win = centerCropWindow3d(size(D),targetSize);
Crop the image using the center cropping window.
Dcrop = imcrop3(D,win);
Display the cropped image in a display panel.
fullViewPnl = uipanel(figure,'Title','Cropped Volume');
volshow(Dcrop,'Parent',fullViewPnl);
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9/13/2021 Crop 3-D image - MATLAB imcrop3 - MathWorks India
Input Arguments collapse all
V — Volume to be cropped
numeric array | logical array | categorical array
Volume to be cropped, specified as a numeric, logical, or categorical array.
V can be a 3-D array that represents a
single channel 3-D volume
or a 4-D array that represents a multichannel 3-D volume. If V
represents a
multichannel 3-D volume, then imcrop3 crops the first
three dimensions only.
Data Types: single | double | int8 | int16 | int32 | int64 | uint8 | uint16 | uint32 | uint64 | logical |
categorical
cuboid — Size and position of crop volume
6-element numeric vector | Cuboid object
Size and position of the crop volume in spatial coordinates, specified as a
6-element vector of the form [xmin
ymin zmin width height depth] or a
images.spatialref.Cuboid object.
Data Types: single | double | int8 | int16 | int32 | int64 | uint8 | uint16 | uint32 | uint64
Output Arguments collapse all
Vout — Cropped volume
logical, numeric, or categorical array
Cropped volume, returned as a logical, numeric, or categorical array of the same
class as the input volume V.
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See Also
images.spatialref.Cuboid | imcrop
Introduced in R2019b
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