Chemistry: AN Journal
Chemistry: AN Journal
AN ASIAN JOURNAL
www.chemasianj.org
Accepted Article
Title: Sensors and Analytical Technologies for Air Quality: Particulate
Matters and Bioaerosols
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Accepted Manuscript
Xiaodi Su, [a, b]*# Laura Sutarlie, [a]# Xian Jun Loh[a] *
[a]
Institute of Materials Research and Engineering, Agency for Science, Technology
and Research, 2 Fusionopolis Way, #08-03 Innovis, Singapore 138634
[b]
Department of Chemistry, National University of Singapore, Block S8, Level 3, 3
Science Drive 3, Singapore 117543
Graphic Abstract
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Abstract
Particulate matters (PMs), e.g. dusts, fibres, smokes, fumes, mists, liquid droplets and
airborne respirable solid or liquid particles, are the major sources of air pollution
concerning outdoor and indoor air quality. Among various PMs, bioaerosols are
airborne particles that are either living organisms (bacteria, viruses, and fungi) or
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originated from living organisms (endotoxin, allergen etc). PMs and/or bioaerosols
have adverse health effects of infection, allergy, and irritation. Proper management and
source identification of PMs and bioaerosols will reduce their negative health impact.
In this review, we will discuss the analytical technologies and sensors for PMs and
gravimetric method (GMM), optical method, β-ray absorption method (BAM), and
locations. For bioaerosols, having more complex biological and biochemical identity,
we will start from air sampling techniques, followed by the discussion of various
and SARS-CoV-2 (COVID-19) virus as examples, we have highlighted the air sampling
and detection challenges for viral aerosols relative to bacterial and fungal aerosols. In
the end, we provide a perspective for future trend according to the limitation of current
1. Introduction
How polluted is the air today? How air pollution is destroying our life? These questions
have attracted more and more attention. Air pollutant only accounts for a very small
part (less than 1 %) in air (both indoor and outdoor air), but it has a huge impact on our
[1]
health, especially if we are exposed to the polluted air for a long period of time .
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Particulate matters (PM) are one of the major types of pollutant in the air. They are a
mixture of solid particles and liquid droplets. Some particles, such as dust, dirt, soot, or
smoke, are large or dark enough to be seen with the naked eye. Others are so small and
can only be detected using an electron microscope. PM10 and PM2.5 refer to the
[2]
particulates in the air with a diameter less than 10 μm and 2.5 μm, respectively.
Examples of PM10 include dust, soot, pollen, etc. Examples of PM2.5 include
combustion particles, organic compounds, and metal, etc. These particulates are small
enough, inhalable deep into the lung, and have potential cardiovascular effects. Long-
getting lung cancer that has an average life expectancy about 6 months. [2,3]
Many people spend large portion of time, working, studying, eating, drinking and
continuously, and air circulation may be restricted. Pollution exposure at home and
work is often greater than outdoors. This is because recycled air and restricted air
circulation can trap and accumulate pollutants. The major concern of indoor air is
bioaerosols. They are often found in private houses, non-industrial workplaces and
Bioaerosols are also called as “organic dust”. They are either living organisms such as
bacteria, viruses, and fungi, or particulates originate from living organisms such as
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microorganisms), mycotoxins (toxins produced by fungi), fragment of plants
(pollen, plant fibre), dust mites, dust mites, cockroaches, pet dander, etc.[4, 5] Many
bioaerosols have severe health impacts, such as disease infection and allergenic
sensitivity. Some pathogenic bioaerosols can even cause epidemic and pandemic
infection, for example COVID-19. These adverse health impacts could also be
attributed to their ability to infect human, grow, multiply, and produce toxic
discharged from an infected person via coughing, sneezing, laughing or close personal
contact, and survive in the air/ surfaces.[6] It can be very challenging to prevent the
spread of airborne pathogens indoor if the air circulation/ ventilation system is not well
designed.
pets, plants, plumbing systems, heating, ventilation, and air-conditioning systems, and
outdoor air. Reprint from Ref. [7] Copyright Springer Nature.
For effective and accurate assessment of air quality, numerous analytical techniques
have been developed for detecting PM and identifying types of bioaerosols. Before
with examples (Figure 2). Besides the well-studied PM2.5 and PM10, airborne particles
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between 0.1–0.7 μm are called as fine particles (FPs), and those smaller than 0.1 μm
(usually 0.055–0.1 μm) are defined as ultrafine particles (UFPs). According to the
physicochemical principles have been exploited for air sampler development and for
In this review, we will discuss most recently developed sensors and analytical
available for larger particles (PM2.5 and PM10), identification and detection of UFPs and
FPs have posted major challenges in technology development and adoption. We will
first introduce four types of PM analyzers, and discuss how commercial analyzers of
different principles have been used, compared and calibrated for specific applications
of different climate and geographic locations. We will also discuss the technology
development for fine and ultrafine PM analysis, and the demand of in-field test. For
bioaerosols, having more complex biological and biochemical identity, we will start
from air sampling techniques, followed by the discussion of various detection methods
performance attributes, including different air sampling and detection challenges for
Air quality sensors is huge topic with a wide range of technologies involved. In the
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selection of the reference materials, we have considered the balance between
that tackle specific new challenges. Particularly, through this review, we will provide
perspectives about the commercial readiness of the sensing technologies and the
respective R&D focus for different types of particulate pollutants (being either sensor
the end of the review, we will provide a perspective for future trend according to
the key challenges in this field, and the market trend to meet the demand of increasing
Figure 2. Size of particulate matters and their definitions. PM: particulate matter; FP: fine
particle; UFP: ultrafine particle.
2. PM Analyzers
based gravimetric method (GMM), laser based optical method, β-attenuation or β-ray
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absorption method (BAM), and Tapered Element Oscillating Microbalance (TEOM)
method.[2] The filter-based GMM is far more accurate and stable than others. Thus this
method has been chosen by many countries as the standard method for testing PM. The
optical law in BAM has been well developed due to its low cost, high efficiency, and
convenient features. On the other hand, laser based optical methods are currently the
mainstream of PM sensors in the market. In this review we will focus more on the filter-
based GMM and the optical methods. The BAM and TEOM will be discussed briefly.
Collecting PM on a filter for analysis is the oldest and best understood method for
measuring particle pollution. A GMM device (Figure 3a) consists of three main
components, i.e. an impactor, a filter, and a precision pump. [12] The impactor (Figure
3b) is a momentum-based particle sorter that sorts the particles by size as the particles
passing through the striker. The particles passing through the impactor are then
collected by the next filter to obtain the corresponding PM weight. The pump draws air
at a constant rate to obtain a precise air volume corresponding to the particles of defined
weight, resulting in a PM concentration. The basic working principle is that when the
pump draws air into the sensor, the airflow deflects as it hits the striker. Small particles
can rotate with the airflow because of small momentum, avoiding being collected by
the impactor. However, large particles that exceed certain size will not be able to turn
because of their large momentum. They will collide with the impactor surface and be
screened.
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Figure 3. (a) Schematic drawing of a filter-based gravimetric method (GMM). (b)
Principle of the impactor. Adapted from Ref. [12] Copyright 2011 Springer Nature
Limited.
The operation of a GMM relies on parallel processing of blank and sample filter, and
the before and post sampling weighting of the filters for final data analysis to get the
In contrast to the GMM, optical methods, usually laser light scattering, are more
appealing for real-time monitoring with a faster response. An optical sensor measures
the size of particles by light scattering (Figure 4).[13] During the detection process, each
9
particle is illuminated by a defined laser, and the photodiode detects the scattered signal
to the signal. In such a system, firstly, the laser source will shine on the air channel
where the air is flow in. The laser will then undergo the light scattering process by the
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particles. After the microprocessor data collection, the results can be generated through
Figure 4. (a) Measurement principle of a laser based optical aerosol spectrometer. (b)
laser measuring chamber. Reprinted from Ref. [13] Copyright 2012 Taylor & Francis.
The accuracy of the optical sensor can be affected by several factors, including
aerosol characteristics (i.e. particle size distribution, light absorption, and refractive
index), temperature, and even seasonal types. By considering and correcting these
influencing factors, the accuracy of the PM optical sensor can be improved. PM optical
sensor remains the preferred principle in large scale commercial sensors, due to its
10
The research in PM optical sensors includes not only new sensor development that
exploits new optical principle, but more on the evaluation of largely available
commercial sensors in the market. For new sensor development, firstly, Wang et al.,
[14]
reported a new optical-fibre-based airborne particle counter. It is different from
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traditional light scattering techniques, where particles are detected through the drop in
optical fiber coupling efficiency as the particles disrupt the electromagnetic mode of
the optical beam. The system does not require high power laser input, and thus it is
smaller than the traditional techniques. The authors have shown the close agreement
between theoretical model and experimental results for solid and liquid particles in the
[15]
This sensor can detect particles with diameter as small as ∼ 0.3 mm and can measure
PM2.5 mass concentrations as high as ~ 600 µg/m3. They also conducted year-round
ambient observations at four urban and suburban sites in Fukuoka, Kadoma, Kasugai,
and Tokyo, Japan, and proved that the data collected by their sensor was in good
11
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Figure 5. Schematic of a palm sized optical PM2.5 sensor. (a) outside and (b) inside.
Reprinted from Ref. [15] Copyright 2018 Taylor & Francis
2.3. Beta Ray Absorption Method (BAM) and Tapered Element Oscillating
Figure 6a shows the principle of the BAM PM analyser that employs the absorption of
beta radiation by solid particles extracted from air flow. The process of testing is similar
12
to GMM. Through the membrane system, an air pump draws air from the environment.
The particles in the air are sucked up and deposited on the filter. Next, the particle-
calculated based on the energy attenuated degree of the β-rays penetrating the sample.
[16]
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Raja et al, recently demonstrated the real-time PM2.5 mass concentration detection using
a BAM device for chemical species, including elements, ions, organic and elemental
carbon, and molecular markers. They concluded a major issue of the blank values in
the filter tape. Based on blank spot analyses, it was determined that measurement of
organic and elemental carbon (OC/EC) and elements were infeasible. [18]
The TEOM method (Figure 6b) uses a cone-shaped elemental oscillation microbalance.
Similar to GMM and BAM, TEOM also uses a filter to collect PM samples, but the
tube with a replaceable filter at its oscillating end. The frequency at which the hollow
tube oscillates is determined by the characteristics of the conical tube itself and its
quality. When the precision pump introduces air into the filter and the PM particles
deposit, the weight of the hollow tube changes and causes a change in its oscillation
frequency. According to the change of the oscillation frequency, the mass of the PM
sample deposited on the filter membrane can be calculated, and then the PM
concentration of the air can be obtained according to the volume of the air extracted by
13
In a common practice, the filter used for particle collection in a TEOM monitor is
regularly exchanged for new ones. Most recently, Nosratabadi et al., demonstrated the
extracting the particles, and studying the particles regarding their ability to generate
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oxidants, endotoxin content, and ability to activate inflammatory cells.[19] The particles
collected have considerable seasonal and spatial difference in their oxidative potential,
Instead of discarding the TEOM filters, the extracted particles from the filters can be
further analysed in term of their toxicity, providing more characteristics for the
collected particles.
Airborne particles with size between 0.1–0.7 μm are fine particles (FPs), and airborne
particles smaller than 0.1 μm (100 nm) are defined as ultrafine particles (UFPs).
Comparing to PM2.5, FPs and UFPs cause more pulmonary inflammation and are
retained longer in the lung. They have increased toxicity due to their smaller size, larger
surface area, adsorbed surface material, and the physical characteristics. They are also
linked with diabetes and cancer. [20] Accurate evaluation of the distribution of ultrafine
[21,22]
children. However, the detection of FPs and UFPs posed major challenges as
the commonly used PM2.5 index fails to provide size distribution for FPs and UFPs.
14
spectrometer by using a nanofiber array for probing FPs and UFPs with an
[23]
unprecedented size resolution of 10 nm (Figure 7). Through control of the
polarization of the probe light, the uniform nanofibers provide strong optical
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was used to study the air particulate matters in Beijing. It yielded size distribution
and mass concentrations of the nanoparticles that are in agreement with the officially
released data. This nanofiber-array size spectrometer is capable for full monitoring
of PMs (including FPs and UFPs) in air, and for monitoring early-stage haze
evolution.
Figure 7. A size spectrometer using a nanofiber array for probing FPs and UFPs with
a 10-nm resolution. (A) Schematic set-up of nanowaveguide-based size spectrometry.
(B) Optical image of the nanowaveguides. (C) Comparison of the diameter distribution
of a nanowaveguide from the theoretical prediction and SEM measurements. (D)
Theory and simulation of scattering efficiency. (E) Scattering efficiency of a spherical
nanoparticle as a function of the waveguide diameter and particle size. Reprinted from
Ref. [23] Open access and free to use.
In addition to the above optical method, electrical method is also reported for FPs and
numbers downstream of the flue gas treatment systems of a wide variety of medium-
and large-scale industrial installations, using a Low Pressure Impactor (ELPI). When
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the chemical composition of the particles. With combined particle density and chemical
Many available technologies often share similar or common components. They can be
used in combination in order to get accurate results and/or identify source affecting the
detection outcome. For example, the accuracy of an optical sensor can be affected by
many reasons, such as the particle size distributions, light absorptions, index of
[25]
filter-based GMM for in-line measurement with more accurate results. Shin et al,
for example, has compared the β-ray absorption method (BAM) and gravimetric
method (GMM) for the measurement of mass concentrations of particulate matter less
consistent difference. By using a gas/particle equilibrium model, they have found out
the major factors that affected the concentration difference, including relative humidity,
16
With the availability of many low-cost commercial analyzers, can these commercial
low-cost sensor platforms contribute to air quality monitoring and exposure estimates?
Several studies have investigated some commercial low cost sensors, in order to better
understand their performance for improving the spatial and temporal resolution of
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particulate matter data. Badura et al., evaluated four models of low-cost optical sensors,
i.e. SDS011 (Nova Fitness), ZH03A (Winsen), PMS7003 (Plantower), and OPC-N2
[26]
(Alphasense), against a TEOM 1400a analyser (Figure 8). Through nearly half a
the coefficient of variation (CV) values were found lower than 7% in the case of
SDS011 and PMS7003 sensors and equal to 20% for OPC-N2 units. And CV was higher
than 50% for ZH03A, mainly due to malfunctions. They have also assessed the linearity
commented that low-cost optical PM sensors could be effective tools for ambient air
quality monitoring, upon proper calibrations. Castell et al., [26] conducted an evaluation
of 24 identical units of a commercial low-cost sensor (for gases and PMs). They used
measurement capability over time and a range of environmental conditions of the low-
cost units. Their results show that the performance of these 24 units varies spatially and
conditions. This is an important study, showing that commercial low-cost sensors need
to be tested for their performance. In another similar study, Zheng et al, characterized
17
and three Federal Equivalent Methods (FEMs) as references (two Teledyne model
T640s and a Thermo Scientific model 5030 SHARP). In this study, they focus on PM2.5
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across a range of concentrations to calibrate the low-cost analyser. They concluded that
The above examples show the importance of proper evaluation of commercial analyzers.
To facilitate such evaluation study, Hapidin et al, designed an advanced aerosol chamber.
In the chamber, they introduced an output airflow rate to decay the PM concentration
processes. [28] The chamber was then utilized to evaluate three commercial PM sensors
(Sharp GP2Y1010AU0F, Winsen ZH03A, and Novafitness SDS011). In this study, they
used a condensation particle counter (TSI, 3025A) and particle sensor (Honeywell,
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While PM analysers can monitor particle mass or concentration, bioaerosol analysis
requires more sophisticated technologies and analytical systems for identification of the
particle collection. After air sampling, compatible analytical techniques are coupled as
downstream tools to study the biological content and properties of the captured particles.
Depending on the type of bioaerosol, the downstream analytical tools include plate
A wide variety of air samplers are available for capturing bioaerosols of a wide range
of particle sizes (from tens of nanometers for “naked” virus to more than 100 μm for
fungi, mold and protozoa aerosols, depending on the humidity). [30] These samplers are
bioaerosols samplers are: one sampler may not collect all types of bioaerosols; no
sampling device provides 100% recovery of the particles (especially for viruses which
have microns and sub-micron range aerosol particles[29]); the viability of bioaerosol
19
samples should be maintained in the sampler for subsequent analysis; and efficiency of
the sampler depends on the size of the particular organism. In this session we will
discuss various viable (bacteria, virus, fungi, mold) and nonviable bioaerosols (toxin,
Following the sampling, the choice of the downstream analytical approach is according
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[30]
to viability of the bioaerosols and identification level required. Viable bioaerosols
(bacteria, fungi, virus) can be detected through culture methods (with culture medium
that can be adjusted for selectivity detection), and culture –free methods (molecular
methods or biosensors). Non-viable bioaerosols with large size like pollen can be
detected by microscopy, and those with small size like toxin can be detected by
biosensors, Raman or mass spectrometry. Detailed examples and discussion are given
Current ISO standard for microbiological air quality evaluation (ISO 14698-1:2003)
entails passive or active air sampling methods, followed by culture plate count. [31] The
passive and active air sampling refers to air sample collection without or with forced
airflow. Figure 9 shows an example of passive and active air sampling by exposing a
petri dish containing a selected solid culture medium to the air without or with forced
airflow, respectively. Particularly, the passive air sampling in Figure 9a, also referred
as diffusive sampling, involves leaving the settle plate to be exposed to air for a period
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of time, where bacteria cells may settle by gravity on the surface of the plate. Other
passive collection methods are dust fall collector and electrostatic dust fall collector. [32]
Larger bioaerosols like fungi cells also can be collected together in this sampling, and
molecular methods. Further discussion for fungal is in section 3.3. The passive method
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is considered non-quantitative because some particles may not settle onto the plate
[33]
within the sampling time, and it does not specify the volume of air sampled. In
contrast, the active air sampling (Figure 9b) is typically a pumped sampling with
controlled pump flow rate. It allows for both qualitative and quantitative analysis. It is
fast and ideal for controlled area where biological particle count is low. [31]
Figure 9. Schematic of (a) passive air sampling on a settling plate, and (b) active
sampling by impaction on plate filled with medium for detection of viable bioaerosol.
Particles collected on the plates are cultured.
Napoli et al., has recently compared these two sampling methods for evaluation of
microbial contamination in operating theatres. [30] Specifically, they evaluated the Total
Viable Count (TVC) at rest (in the morning before the beginning of surgical activity)
and in operational (during surgery) using the passive and active sampling methods
21
followed by plate culture. They demonstrated that when a strict protocol is followed,
results of active and passive sampling correlate well for both at rest and in operational
sampling. However, when the choice must be made between one or the other, they
suggested that passive measurement is better than active volumetric sampling during
surgery, when the measurement is carried out to monitor the risk of microbial wound
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contamination. On the other hand, if the sampling is performed to obtain information
on the concentration of all inhalable viable particles, the active method should be
preferred.
bacteria in natural (e.g., rivers, lakes) and artificial (e.g., showers, cooling towers)
the water is stagnant and rich in sediments, and causes a typical pneumonia known as
droplets. Chang and Hung discussed the methods for detection and quantification of
airborne Legionella around cooling towers. [32] They assessed the capabilities of eight
for monitoring culturable, viable, and total legionellae around cooling towers. They
found that viable and total legionella can be efficiently sampled by a filter based IOM
equipped with a gelatin filter. It is interesting to note that the three sampling methods
22
(agar-based, filter-based, and liquid-based) have different flow rate, sampling time, and
sampled volume. The liquid-based SASS 2300 has the highest flow rate allowing the
largest volume of sampled air in a given sample duration. This could be the reason why
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Due to the involvement of bacteria culture, the so called standard procedure (air
[33, 34]
sampling and bacteria plate culture and count) requires more than 24 hours and
thus it is not practical for rapid on-site detection and monitoring. Furthermore, the
standard plate culture method is also not adequate for identification of bacteria. Many
bacteria of multiple species can grow on the same type of agar plate. Other limiting
sampling, sampling time, and environmental factors variation, e.g. temperature, relative
To achieve faster bacteria detection, various culture-free methods have been developed
integrated with bacteria aerosol sampling to detect bacteria in air. Immunoassays, for
example ELISA, have been widely used to detect pathogens with high sensitivity and
pipetting steps. For airborne pathogen detection, the assay must be combined with
23
transducers that can translate the biological event into measureable signals. Biosensor
technologies have been coupled with air sampling processes for direct aerosol analysis.
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developed. Some of these examples are bioluminescence ATP (adenosine triphosphate)
sensor demonstrated for bacteria bioaerosol. Detection of ATP from aerosol reflects the
presence of living microbes because ATP is a biological energy source within living
cell. The traditional ATP test for hygiene monitoring has now been modified and further
developed into new systems and new designs for bacteria detection in air. One of the
for real-time detection. [37, 38] Another example is by Park et al, where they introduced
a methodology for disrupting cell membranes with air ions coupled with ATP
epidermidis and Escherichia coli, and indoor bioaerosols. They have built the
correlation of the bioluminescence signal with plate culture Colony Forming Unit
(CFU/m3) obtained by plate culture. They have proved that their system is reliable and
fast (cell-lysis time: 3 min; bioluminescence detection time: <1 min) and easy operation.
Nevertheless, ATP presents in bacteria and other living cells, and it cannot provide
24
identification of specific bacteria species. Other optical sensor exploits staining bacteria
captured from air by colliding mist of specific antibody labelled with fluorescent dye
to quickly bind bacteria cell entrapped on an impaction plate. The system can detect
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In addition to the coupling of biosensors with air sampler, microfluidic device is further
added into the airborne bacteria detection. For example, a portable system of integrated
microfluidic chip is developed, in which bacteria is captured from air to water. The
microfluidic device performs bacteria cell enrichment and PCR detection. The device
is demonstrated for aerosolized P. aeruginosa within 70 min. [40] Microfluidic chip can
Like other bioaerosols, viruses can be released to air in droplets or become airborne and
remain infectious outside their hosts for prolonged periods of time. Detection of viruses
in air is essential to understand and prevent viral transmission, and for surveillance.
Comparing to bacteria aerosols, viral aerosol collection and detection have specific
challenges related to their size (size distribution) and their cell structure. Viruses are
generally smaller in size than bacteria or other microorganisms, ranging from tens to
hundreds of nm for single virus particles (or “naked” virus) to micrometer after
25
sampling is to collect as much virus in various size range and to keep them viable.
Collection of nanomater particulates typically requires high impact or high air flow, but
it may decrease virus viability. [43, 44] Commonly used instruments to recover viruses
suspended in the air include liquid impingers, solid impactors, filters, electrostatic
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precipitators, and many others. [43, 44] The collection efficiency, i.e. physical collection
efficiency (the ratio of the amount of captured particles to the total particle in air) and
biological collection efficiency (the fraction of biologically active virus that remains
viable after collection), varies according to collection conditions and types of the virus.
The aerodynamic size distribution has a direct effect on physical collection efficiency.
Environmental conditions, like pH, temperature, light irradiation, also affect the
[45]
worked out for a specific application. Ladhani et al., for example, demonstrated a
demonstrated that the performance of the ESP-based sampler shows a higher collection
efficiency of 47%, than other liquid-based samplers; and the sampling time is reduced
26
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Figure 10. A electrostatic precipitation (ESP)-based bioaerosol sampler for sub-
micron aerosols of influenza virus. The aerosolized viruses are sampled directly into a
miniaturized collector with liquid volume of 150 μL. The obtained liquid sample is
directly analysed by PCR assays. Reprinted from Ref. [45] Unrestricted use of
copyright.
Fabian et al, compared the collection performance of four aerosol samplers, i.e. a liquid
based SKC Biosampler, a compact cascade impactor (CCI), Teflon filters, and gelatin
filters for collection of aerosolized influenza virus.[46] The infectivity of the captured
influenza virus was determined using a fluorescent focus assay and quantitative PCR.
They found that the SKC Biosampler has a much higher efficiency in recovering
preserved influenza virus than the other samplers, which only recovered 7–22% of
infectious viruses. More discussion about molecular detection (PCR) coupled air
27
The last two work in the earlier session are the examples, where viral sampling coupled
with molecular analysis. This is true that viruses do not have ATP, thus ATP test cannot
be used for downstream analysis. Moreover, viruses only grow in their host cells, thus
less convenient for culture analysis. To detect the virus, the most popular method is to
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analyze the genetic material of virus (DNA or RNA) through PCR for DNA, and reverse
transcription polymerase chain reaction (RT-PCR) for RNA. PCR/RT-PCR can identify
virus species but they detect genetic materials from both viable and non-viable virus
cells, which mean that it cannot tell whether the virus detected is still infectious (viable)
or dead. To assess the viability, PCR should be accompanied with a virus plaque assay
(culturing virus in host cells and counting how many host cells are infected/ dead due
to virus). However, plaque assay is not as simple as bacteria/ fungi culture (on non-
living medium, i.e. agar plates). Plaque assay uses live host cells, which requires tedious
In PCR based airborne pathogen detection study, great efforts have been made for
sampling of viruses, particularly viruses with RNA, the sampling methods must be able
to retain the integrity of the RNA in the virus. Figure 11 shows an example of airborne
[47]
sample analysis that couples molecular analysis with particle sampling . In this
design, bioaerosols in the ambient air are sucked in through the inlet of the bio-sampler
28
individual PUF strips are then processed for pathogen isolation and nucleic acid
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Figure 11. An example of airborne sample analysis platform coupling molecular
analysis. Reprinted from Ref. [47] Unrestricted use of copyright.
RT-PCR combines reverse transcription of RNA into DNA (in this context called
using polymerase chain reaction (PCR). RT-PCR is required for RNA virus detection
because RNA molecules are not stable, and they can’t withstand the PCR processes.
Influenza A (H1N1) virus was first identified in April 2009, when real-time RT-PCR
[48]
was a relatively new technique. Since then RT-PCR protocols were largely
detection of the assay was 384 copies of viral RNA per ml of viral transport medium
(95% confidence interval: 273-876 RNA copies/ml). This assay for the influenza A
29
[49]
matrix gene was recommended in 2007 by the World Health Organization. It was
then further modified as the influenza A(H1N1)v virus-specific test. Both assays were
equally sensitive. [50] Since then, this molecular technique has been largely applied as
[51] [52,53]
downstream detection techniques for influenza virus and rhinovirus aerosols
in air. Efforts on design new samples technologies coupling RT-PCR have been
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continued. Huynh et al., designed a mask designed to capture virus from patients
following talking, breathing, and coughing, during a 20 min time. [53] The captured virus
sample were sent to lab for identification using a conventional RT-PCR. Lednicky et
al., also reported a novel way for the sampling of A/H3N2 viruses in a short time. [55]
Their system used two samplers, i.e. personal air samplers along with media-containing
air samplers. They have demonstrated in-field detection. Noti et al., reported the
[55]
patient examination room. With this study, they determined whether coughed
influenza was infectious. They also assessed the effectiveness of an N95 respirator and
SARS-Cov-2 (COVID-19) pandemic started from end 2019. There has been extensive
studies of whether SARS-CoV-2 may also spread through aerosols in the absence of
aerosol generating procedures, particularly in indoor settings with poor ventilation. RT-
PCR has been largely used as downstream analysis test following air sampling. Some
studies conducted in health care settings, where symptomatic COVID-19 patients were
[56-58]
cared for, reported the presence of SARS-CoV-2 RNA in air samples. Most of
30
these studies used impinger technique and pre-sterilized gelatin filters, followed by
[57,58]
hospitals during the outbreak of COVID-19 in February and March 2020. By
using a miniature cascade impactor (Sioutas Impactor, SKC), the collected aerosol
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samples were separated into five ranges (>2.5 μm, 1.0–2.5 μm, 0.50–1.0 μm and 0.25–
0.50 μm on 25-mm filter substrates, and 0–0.25 μm on 37-mm filters). The studies
concluded that the concentration of SARS-CoV-2 RNA in aerosols that was detected in
isolation wards and ventilated patient rooms was very low, but it was higher in the toilet
Other COVID-19 aerosol studies involving viral cultures concluded no viable virus in
air samples.[59-67] According to the RT-PCR data, the quantity of RNA detected was in
[59]
extremely low numbers in large volumes of air. Bullard et al. have concluded that
the RT-PCR assay result is not necessarily indicative of replication- and infection-
competent (viable) virus that could be transmissible and capable of causing infection.[68]
In a most recent literature, Zhu et al., investigates the associations of six air pollutants
[69]
(PM2.5, PM10, SO2, CO, NO2 and O3) with COVID-19 confirmed cases. They
observed significantly positive associations of PM2.5, PM10, NO2 and O3 in the last two
weeks with newly COVID-19 confirmed cases. This study further highlighted the
31
Accepted Manuscript
Figure 12. Concentration of airborne SARS-CoV-2 RNA in different aerosol size
bins from a study performed in Wuhan Fangcang hospital, during the outbreak of
COVID-19 in February and March 2020. Concentration of SARS-CoV-2 in a
protective-apparel removal room in zone B (a), zone C (b), and in the medical staff’s
office (c) of the hospital. The x axis represents the aerodynamic diameter on a
logarithmic scale to cover the multiple magnitudes of measured aerosol diameters.
Reprinted from Ref. [58] Copyright 2020 Nature Publishing Group.
[70]
Biosensors can be used as alternative downstream analysis methods. Kwon and
Fronczek et al. described a microfluidic particle immunoassay for the rapid detection
with a smartphone.[71] Shen et al. developed a nearly automated microfluidic device that
captured airborne influenza A/H1N1, H3N2, and SARS viruses using antibody-coated
handling for rapid detection in 2 min. It can detect 104 viruses per µL collected liquid,
32
Fungal and mold-containing aerosols can account for large proportions of air
infection, or irritation. [73-77] Fluorescent based analytical methods include ATP meter
[78]
, fluorescent dye staining [79], and the exploitation of their autofluorescent properties
Accepted Manuscript
[80]
. Since fungal aerosols consist of spores and fragments with diverse array of
morphologies, they can also be identified by their morphological characteristics. [81, 82]
Moreover, plate culture and nucleic acids detection will provide their biochemical
characteristics, from which one can determine their role in infection, allergy and
irritation [81-88]. Table 1 shows a few examples of airborne fungi identification, covering
the air sampler used, downstream detection methods, and major fungi species studied.
33
Accepted Manuscript
(SPG).
Mycosphaerella brassicicola a personal volumetric air Total Analysis Systems 88
sampler (Rickmansworth, (TAS), immunoassay
Hertsfordshire, United
Kingdom)
Microscopy (FESEM) and/or SEM are often used. Afanou et al characterized the profile
[87]
PM10 sampler (APM550 from Envirotech, India). From the FESEM images (Figure
13), it can be seen that the collected particles have distinct structural features, including
the near spherical particles (mostly only single spores), oblong particles (comprising some
spore aggregates and fragments, <3.5 μm), and fiber-like particles that regroup chained
spore aggregates and fragments (>3.5 μm). This study has proven that fungal particles of
various size, shape, and origin can be aerosolized. This is one of the recent reports of
fungal exposure assessment over different seasons. In fact, fungal exposure assessment
over different season has been a general concern of a vast wealth of studies, as shown in
34
Accepted Manuscript
Figure 13. FESEM images of allergenic and plant pathogenic fungal spores. The
species type of the spores was revealed by DNA analysis. (a) A. fumigatus, (b) A. favus,
(c) A. niger, (d) A. rhizopus, (e) young spores of Cladosporium sp. in a chain form, (f)
mature single spore of Cladosporium sp., (g) Alternaria sp., (h) Rhizopus sp., (i)
Chaetomium sp., (j) Neurospora crassa., and (k) Epicoccum sp. Scale is different for
every image and is given at the bottom of each image. Reprinted from Ref. [87]
Unrestricted use of copyright.
To better understand the role of fungi in infection, allergy and irritation, fungi
identification is needed. Plate culture and DNA detection are frequently used methods.
In the same study by Afanou et al., following SEM characterization, they performed
DNA identification using qPCR for each fungi spore. Coupling the allergy
epidemiological data, they found correlation with the reported allergy cases with the
For DNA detection, the methods for DNA production following particle sampling are
[91]
important. Williams et al., reported three methods to produce DNA for PCR tests
35
sampler: (1) adding untreated spores to PCRs, (2) disrupting spores (fracturing of spore
walls to release the contents) using Ballotini beads, and (3) disrupting spores followed
by DNA purification. Disrupting the spores was found to be most suitable for achieving
maximum sensitivity and it was possible to detect DNA from a single spore.
Accepted Manuscript
Fungi can also be detected by immunoassay and/or biosensor, following the sampling
process. Total Analysis Systems (TAS) have been developed that could be portable due
[92]
microtiter immunospore trapping device was developed by Kennedy et al. This
device can capture Mycosphaerella brassicicola into microplate wells, to conduct the
immunoassay analysis. More recently Li et al. [93] developed a microfluidic system with
Biocontaminants, such as some fungi/mold spores or pollen grains, settle rapidly within
the indoor environment, due to their large size and mass. Over time they may become
produced by fungi), glucans (components of cell walls of many molds), pollen, animal
debris, and plant fibers, are other examples of nonviable bioaerosols. Pollens (~100 µm)
36
with relatively large size under microscope can be detected and classified by using a
[95, 96]
portable light microscope and image analysis algorithm . Automated online
version of microscope with image analysis for pollen monitoring from air also has been
[97]
reported. Meanwhile, many of smaller nonviable bioaerosols like endotoxins,
Accepted Manuscript
optical spectroscopy, Raman spectroscopy, and mass spectrometry (MS) technologies
have been largely used for detecting these analytes upon proper sampling. [98-102]
PM and bioaerosols count for large proportions of air pollutant with adverse health
measurement. The R&D focus is about product validation and calibration against
specific use cases and environments, i.e. specific countries, regions, and outdoor and
downstream analytical methods. One of the major issues is the lack of standardization
in the methodology, from air sampling strategies, sample treatment to the analytical
highly sensitivity detection techniques is important. Not only the physical efficiency
(the ratio of capture particles relative to the total particles available), but also the
biological efficiency (the fraction of biologically active particles of the viable particles
37
upon collection) is highly important for assessing the infectivity. Integrated sampling
and detection/identification technologies are far behind those for other pollutants in
In general, air quality monitoring and control are an extremely complex issue that
Accepted Manuscript
requires both technology advancement and governmental influence for technology
adoption. Many technologies have been far being ready for adoption because the lack
All in all, for all pollutants and any given category of pollutant, the market requires
sampling and sensor technologies with the following attributes: efficient, fast, sensitive,
low-cost, easy to install and easy to use, intelligent calibration, connective to a network.
With all these attributes fulfilled, the sensor technologies are expected to lead to
reducing air pollution risks. The integrated and standardized technology platform and
application protocols will promote the implementation of the public health prevention
38
Acknowledgments
Accepted Manuscript
Conflict of interest
The authors declare no conflict of interest.
39
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Accepted Manuscript
45
Dr Su Xiaodi
Accepted Manuscript
Outstanding University Researcher Award in 1999 for her postdoc
research work in National University of Singapore (NUS).
Dr Laura Sutarlie
Laura Sutarlie obtained her PhD in Chemical and Biomolecular Engineering from
National University of Singapore in 2012. She is a scientist in Institute of Materials
Research and Engineering (IMRE), A*STAR, Singapore. Her research interest includes
development of rapid and low cost sensors/biosensors for detection of chemicals,
biomolecules, and microorganisms.
46