Single-cell classification and analysis, optimized for embryonic and fetal development

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for cahanlab from gravatar.com cahanlab

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License Expression: MIT
    SPDX License Expression
  • Author: Patrick Cahan
  • Tags single cell , cell typing , classification , embryo , embryoid , gastruloid
  • Requires: Python >=3.9
Report project as malware

Project description

pySingleCellNet

Docs Status

GitHub stars

PyPI version

pySingleCellNet helps you classify and analyze single-cell RNA-Seq data, …

PySingleCellNet

A computational toolkit for the single cell analysis and comparison of embryos and embryo models

PySingleCellNet (PySCN) predicts the 'cell type' of query scRNA-seq data by Random forest multi-class classification. See Tan & Cahan 2019 for more details. PySCN includes functionality to aid in the analysis of engineered cell populations (i.e. cells derived via directed differentiation of pluripotent stem cells or via direct conversion).

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for cahanlab from gravatar.com cahanlab

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License Expression: MIT
    SPDX License Expression
  • Author: Patrick Cahan
  • Tags single cell , cell typing , classification , embryo , embryoid , gastruloid
  • Requires: Python >=3.9

Release history Release notifications | RSS feed

This version

0.1.3

0.1.2

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pysinglecellnet-0.1.3.tar.gz (9.0 MB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

pysinglecellnet-0.1.3-py3-none-any.whl (148.4 kB view details)

Uploaded Python 3

File details

Details for the file pysinglecellnet-0.1.3.tar.gz.

File metadata

  • Download URL: pysinglecellnet-0.1.3.tar.gz
  • Upload date:
  • Size: 9.0 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.12.8

File hashes

Hashes for pysinglecellnet-0.1.3.tar.gz
Algorithm Hash digest
SHA256 bbeff044a9d3e7e05ace35b1d6b2fea4f540ffcce59740ec9a58b62e5c7c33f9
MD5 213a452876cb6d4ece787c3e14dc9ea0
BLAKE2b-256 70763cb4b000a41e7cca10278e120b3d29ed8ba17a88d08c1f18c0b79bb5f627

See more details on using hashes here.

File details

Details for the file pysinglecellnet-0.1.3-py3-none-any.whl.

File metadata

File hashes

Hashes for pysinglecellnet-0.1.3-py3-none-any.whl
Algorithm Hash digest
SHA256 79edc573cc784bc6cf3b2f67472213524f59c06477dd2fae143dea019fc39b18
MD5 5732299ec1c693bb63d5d6a98446dd8f
BLAKE2b-256 05d034d1721559cb72538e64b33f9e3e0cda5bf11d49c9918db8d333de005c95

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page