Important Note: Support for both the old XML formats has been extended through the end of December 2024. To prepare for these changes, please preview the updated XML schema and supporting documentation on GitHub. |
As previously announced, we updated the ClinVar website as part of our effort to better support the display of submitted somatic variation data.
What changed?
- Updated ClinVar search results
- Germline / Somatic origin filter
- Somatic Classification and Review Status summary
Updated Variant (VCV) record page
- Includes both Germline and Somatic data for the same variant
- Switch to turn on/off Somatic or Germline information
Efetch command within E-utilities
- By default, the E-utilities efetch command now retrieves the new XML with support for somatic variant
- Include the parameter old_xml=T in EFetch calls to get the old XML
- Support for both new and old XML formats through the end of March 2024
Important note: These screenshots include test data and is not intended to represent real variants. But we are ready for your submissions of somatic variation data!
Learn more
For more information about our recent updates to the ClinVar website, check out our release notes.
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Questions?
If you have questions or would like to provide feedback, please reach out to us at [email protected].
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