October-December eukaryotic genome annotations in Refseq

October-December eukaryotic genome annotations in Refseq

Since October, the NCBI Eukaryotic Genome Annotation Pipeline released new annotations in RefSeq for a large number of organisms. We’ve separated them by group; click on “details” to see the full list for each.

Mammals

Pedestrians on pedestrian crosswalk. Top view.

  • Artibeus jamaicensis (Jamaican fruit-eating bat)
  • Arvicola amphibius (Eurasian water vole)
  • Balaenoptera musculus (Blue whale)
  • Cebus imitator (Panamanian white-faced capuchin)
  • Chlorocebus sabaeus (green monkey)
  • Homo sapiens (human)
  • Manis javanica (Malayan pangolin)
  • Manis pentadactyla (Chinese pangolin)
  • Ochotona princeps (American pika)
  • Peromyscus leucopus (white-footed mouse)
  • Pipistrellus kuhlii (Kuhl’s pipistrelle)
  • Sturnira hondurensis (bat)
  • Talpa occidentalis (Iberian mole)
  • Trichosurus vulpecula (common brushtail)

Fish

Red-bellied piranha Pygocentrus nattereri or Red piranha in their habitat.

  • Acanthopagrus latus (yellowfin seabream)
  • Colossoma macropomum (tambaqui)
  • Cyprinodon tularosa (bony fish)
  • Kryptolebias marmoratus (mangrove rivulus)
  • Megalops cyprinoides (Indo-Pacific tarpon)
  • Micropterus salmoides (largemouth bass)
  • Nematolebias whitei (Rio pearlfish)
  • Oncorhynchus mykiss (rainbow trout)
  • Pungitius pungitius (ninespine stickleback)
  • Pygocentrus nattereri (red-bellied piranha)
  • Sebastes umbrosus (honeycomb rockfish)
  • Syngnathus acus (greater pipefish)

Other vertebrates

Male and female mallard ducks (Anas platyrhynchos) on snow.

  • Anas platyrhynchos (mallard)
  • Chelonia mydas (Green sea turtle)
  • Dermochelys coriacea (leatherback sea turtle)
  • Falco rusticolus (gyrfalcon)
  • Motacilla alba alba (white wagtail)

Insects

 Culex quinquefasciatus mosquito on a human finger

  • Bombyx mori (domestic silkworm)
  • Bradysia coprophila (fly)
  • Culex quinquefasciatus (southern house mosquito)
  • Drosophila subpulchrella (fly)
  • Drosophila suzukii (fly)
  • Glossina fuscipes (tsetse fly)
  • Hermetia illucens (fly)
  • Lucilia sericata (common green bottle fly)
  • Manduca sexta (tobacco hornworm)
  • Plutella xylostella (diamondback moth)
  • Rhagoletis pomonella (apple maggot)
  • Teleopsis dalmanni (fly)
  • Zerene cesonia (dogface butterfly)

Other invertebrates

Colorful Bat stars, Patiria miniata, crawl over the seafloor in a kelp forest along the California coast. Kelp forests support a surprising and diverse array of marine biodiversity.

  • Dermacentor silvarum (tick)
  • Octopus sinensis (East Asian common octopus)
  • Patiria miniata (bat star)
  • Penaeus monodon (black tiger shrimp)
  • Pollicipes pollicipes (crustacean)
  • Rhipicephalus microplus (southern cattle tick)
  • Rhipicephalus sanguineus (brown dog tick)

Plants

Brassica rapa

  • Brassica rapa (field mustard)
  • Jatropha curcas (eudicot)
  • Triticum dicoccoides (wild emmer wheat)

See more details on the Eukaryotic RefSeq Genome Annotation Status page.

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