Papers by Anindya Roy Chowdhury
FEBS Letters, 2015
A strong purine asymmetry, along with strand‐biased gene distribution and the presence of PolC, p... more A strong purine asymmetry, along with strand‐biased gene distribution and the presence of PolC, prevails in Bacillus and some other members of Firmicutes, Fusobacteria and Tenericutes. The analysis of protein features in 21 Bacillus species of diverse metabolic, virulence and ecological traits revealed that purine asymmetry in conjunction with lineage/niche specific constraints significantly influences protein evolution in Bacillus. All Bacillus species, except for Se‐respiring Bacillus selenitireducens, display distinct strand‐specific biases in amino acid usage, which may affect the isoelectric point or surface charge distribution of proteins with prevalence of acidic and basic residues in the leading and lagging strand proteins, respectively.
Journal of Investigative Genomics, 2014
World Journal of Translational Medicine, 2014
BMC Genomics, 2012
Background: Archaea evoke interest among researchers for two enigmatic characteristics -a combina... more Background: Archaea evoke interest among researchers for two enigmatic characteristics -a combination of bacterial and eukaryotic components in their molecular architectures and an enormous diversity in their life-style and metabolic capabilities. Despite considerable research efforts, lineage-specific/niche-specific molecular features of the whole archaeal world are yet to be fully unveiled. The study offers the first large-scale in silico proteome analysis of all archaeal species of known genome sequences with a special emphasis on methanogenic and sulphur-metabolising archaea.
A strong purine asymmetry, along with strand-biased gene distribution and the presence of PolC,
p... more A strong purine asymmetry, along with strand-biased gene distribution and the presence of PolC,
prevails in Bacillus and some other members of Firmicutes, Fusobacteria and Tenericutes. The analysis
of protein features in 21 Bacillus species of diverse metabolic, virulence and ecological traits
revealed that purine asymmetry in conjunction with lineage/niche specific constraints significantly
influences protein evolution in Bacillus. All Bacillus species, except for Se-respiring Bacillus selenitireducens,
display distinct strand-specific biases in amino acid usage, which may affect the isoelectric
point or surface charge distribution of proteins with prevalence of acidic and basic residues in the
leading and lagging strand proteins, respectively.
FEBS Letters, 2015
A strong purine asymmetry, along with strand-biased gene distribution and the presence of PolC, p... more A strong purine asymmetry, along with strand-biased gene distribution and the presence of PolC, prevails in Bacillus and some other members of Firmicutes, Fusobacteria and Tenericutes. The analysis of protein features in 21 Bacillus species of diverse metabolic, virulence and ecological traits revealed that purine asymmetry in conjunction with lineage/niche specific constraints significantly influences protein evolution in Bacillus. All Bacillus species, except for Se-respiring Bacillus selenitireducens, display distinct strand-specific biases in amino acid usage, which may affect the isoelectric point or surface charge distribution of proteins with prevalence of acidic and basic residues in the leading and lagging strand proteins, respectively. FEBS Letters xxx (2015) xxx-xxx j o u r n a l h o m e p a g e : w w w . F E B S L e t t e r s . o r g Please cite this article in press as: Goswami, A., et al. Strand-biased gene distribution, purine assymetry and environmental factors influence protein evolution in Bacillus. FEBS Lett. (2015), http://dx.
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Papers by Anindya Roy Chowdhury
prevails in Bacillus and some other members of Firmicutes, Fusobacteria and Tenericutes. The analysis
of protein features in 21 Bacillus species of diverse metabolic, virulence and ecological traits
revealed that purine asymmetry in conjunction with lineage/niche specific constraints significantly
influences protein evolution in Bacillus. All Bacillus species, except for Se-respiring Bacillus selenitireducens,
display distinct strand-specific biases in amino acid usage, which may affect the isoelectric
point or surface charge distribution of proteins with prevalence of acidic and basic residues in the
leading and lagging strand proteins, respectively.
prevails in Bacillus and some other members of Firmicutes, Fusobacteria and Tenericutes. The analysis
of protein features in 21 Bacillus species of diverse metabolic, virulence and ecological traits
revealed that purine asymmetry in conjunction with lineage/niche specific constraints significantly
influences protein evolution in Bacillus. All Bacillus species, except for Se-respiring Bacillus selenitireducens,
display distinct strand-specific biases in amino acid usage, which may affect the isoelectric
point or surface charge distribution of proteins with prevalence of acidic and basic residues in the
leading and lagging strand proteins, respectively.