samtools: Binding to the C samtools library

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Binding to the C samtools library, which reads and writes SAM format alignments, both binary and tab- delimited text formats. It also supports rapid access to specific alignments in a sorted BAM file and access to sequences from indexed Fasta files.

Modules

[Index]

Bio
- SamTools

Flags

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Name	Description	Default
tests	Build test program	Disabled

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Downloads

samtools-0.2.4.3.tar.gz [browse] (Cabal source package)
Package description (as included in the package)

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Package maintainers

NicholasIngolia

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Versions [RSS]	0.1, 0.1.1, 0.1.2, 0.1.3, 0.2, 0.2.0.1, 0.2.1, 0.2.1.1, 0.2.1.2, 0.2.2, 0.2.3, 0.2.4, 0.2.4.1, 0.2.4.2, 0.2.4.3
Dependencies	base (>=4.5 && <5), bytestring, filepath, process, seqloc (>=0.3.1), vector (>=0.7) [details]
License	MIT
Author	Nicholas Ingolia
Maintainer	[email protected]
Uploaded	by NicholasIngolia at 2016-05-30T03:22:14Z
Category	Bioinformatics
Home page	http://www.ingolia-lab.org/samtools-tutorial.html
Source repo	head: git clone http://github.com/ingolia/samtools(samtools)
Distributions
Reverse Dependencies	5 direct, 0 indirect [details]
Executables	samtest
Downloads	12117 total (57 in the last 30 days)
Rating	(no votes yet) [estimated by Bayesian average]
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Status	Docs available [build log] Last success reported on 2016-11-25 [all 2 reports]