Groups

BioXTAS RAW

Contact owners and managers

1–30 of 153

Welcome to the BioXTAS RAW google group. This group is intended to provide a centralized location for user questions, bug reports, etc. It will also provide announcements about the software package, such as new releases.

Documentation for RAW is available from: https://bioxtas-raw.readthedocs.io/

If you have a bug report, please include: system, version number, installation type (package or from source), the appropriate error messages and sample data so we can recreate the bug. That will enable us to find and solve the problem as quickly as possible.

0 selected

Yu Hu, Jesse Hopkins6

12/9/25

Issue with Centering/Calibration for X-ray WAXS Data in Raw

Dear Jesse， The test data is too large to be sent by mail, You can find it in https://drive.google.

unread,

Issue with Centering/Calibration for X-ray WAXS Data in Raw

Dear Jesse， The test data is too large to be sent by mail, You can find it in https://drive.google.

12/9/25

XiaoLan Yao, Jesse Hopkins2

11/29/25

Issue with loading workspeace

Hi, Thanks for the bug report! If you send me the workspace that's causing the error I will

unread,

Issue with loading workspeace

Hi, Thanks for the bug report! If you send me the workspace that's causing the error I will

11/29/25

[email protected]

11/20/25

RAW 2.4.0 released

I'm pleased to announce the release of RAW version 2.4.0. This release has a new Multi-series

unread,

RAW 2.4.0 released

I'm pleased to announce the release of RAW version 2.4.0. This release has a new Multi-series

11/20/25

Siti Khadijah, Jesse Hopkins2

11/8/25

Question Regarding Scattering Intensity Differences After Peak Extraction in BIOXTAS RAW

Hi Khadijah, It would be useful to know how you generated the profile without RAW, and what you used

unread,

Question Regarding Scattering Intensity Differences After Peak Extraction in BIOXTAS RAW

Hi Khadijah, It would be useful to know how you generated the profile without RAW, and what you used

11/8/25

Feng Yu, Jesse Hopkins2

11/8/25

Question about loading a P(r) curve in CSV format

Hi Feng Yu, I've been out of the office, and just getting to this now. Since you're doing

unread,

Question about loading a P(r) curve in CSV format

Hi Feng Yu, I've been out of the office, and just getting to this now. Since you're doing

11/8/25

Lewis Owen, Jesse Hopkins4

10/12/25

Error during MW analysis

Hi Lewis, Your samples definitely aren't monodisperse, or even a combination of monomer and dimer

unread,

Error during MW analysis

Hi Lewis, Your samples definitely aren't monodisperse, or even a combination of monomer and dimer

10/12/25

stefano ciurli, … Jesse Hopkins7

10/7/25

Hi Stefano, Glad to hear that you were able to get it working! All the best. - Jesse ---- Jesse

unread,

Hi Stefano, Glad to hear that you were able to get it working! All the best. - Jesse ---- Jesse

10/7/25

Catherine Royer, Jesse Hopkins2

9/19/25

Problem with RAW Installation

Hi Cathy, A couple of questions and then a couple of suggestions. Questions: 1) Is this an x86 chip (

unread,

Problem with RAW Installation

Hi Cathy, A couple of questions and then a couple of suggestions. Questions: 1) Is this an x86 chip (

9/19/25

XiaoLan Yao, Jesse Hopkins4

8/15/25

Need advice on how to define buffer and sample region in SEC-SAXS

Hi Xiaolan, What beam line did you collect the data at (apologies if it was mine and I'm

unread,

Need advice on how to define buffer and sample region in SEC-SAXS

Hi Xiaolan, What beam line did you collect the data at (apologies if it was mine and I'm

8/15/25

Vera Amirbekian, … Zach Candi9

8/15/25

Error Message when loading a workspace

Hi Jesse, Thank you for all your help. I opted for the save as a .dat and it fixed the problem.

unread,

Error Message when loading a workspace

Hi Jesse, Thank you for all your help. I opted for the save as a .dat and it fixed the problem.

8/15/25

Isabel Elliott, Jesse Hopkins3

8/13/25

ATSAS license file error

Hi Isabel, Yes, this is a new thing with ATSAS 4. If you upgrade to RAW 2.3.1 I have made some

unread,

ATSAS license file error

Hi Isabel, Yes, this is a new thing with ATSAS 4. If you upgrade to RAW 2.3.1 I have made some

8/13/25

[email protected]

7/1/25

RAW 2.3.1 released

I'm pleased to announce the release of RAW version 2.3.1. This is a bug fix release that fixes

unread,

RAW 2.3.1 released

I'm pleased to announce the release of RAW version 2.3.1. This is a bug fix release that fixes

7/1/25

Shahid Khan, Jesse Hopkins3

6/23/25

RAW 2.1.4 installation on Windows 11

I should have also mentioned that the solution that always should work is installing from source:

unread,

RAW 2.1.4 installation on Windows 11

I should have also mentioned that the solution that always should work is installing from source:

6/23/25

Vera Amirbekian, Jesse Hopkins2

5/12/25

Citing the RAW Tutorial website as a source

Hi Vera, I'm assuming that you're referring to this page: https://bioxtas-raw.readthedocs.io/

unread,

Citing the RAW Tutorial website as a source

Hi Vera, I'm assuming that you're referring to this page: https://bioxtas-raw.readthedocs.io/

5/12/25

vishnu dharmaraj, Jesse Hopkins2

4/30/25

Bioxtas RAW Crashing Soon After Opening

Hi Vishnu, I've seen this several times with Windows 11. So far the only known solution, besides

unread,

Bioxtas RAW Crashing Soon After Opening

Hi Vishnu, I've seen this several times with Windows 11. So far the only known solution, besides

4/30/25

Emily Herrell, Jesse Hopkins4

4/1/25

Erros when aligning using DENSS

Hi Jesse, Yes, running as administrator worked for me. Thanks! On Mon, Mar 31, 2025 at 12:57 PM Jesse

unread,

Erros when aligning using DENSS

Hi Jesse, Yes, running as administrator worked for me. Thanks! On Mon, Mar 31, 2025 at 12:57 PM Jesse

4/1/25

Minqi, Jesse Hopkins3

2/14/25

Question about Raw Tutorial Data processing

Hi Jesse, Thanks so much for your reply, and I followed the instructions as you proposed, but the

unread,

Question about Raw Tutorial Data processing

Hi Jesse, Thanks so much for your reply, and I followed the instructions as you proposed, but the

2/14/25

Wojciech Starosta, Jesse Hopkins2

2/6/25

Re: [Bioxtas Raw] Abridged summary of [email protected] - 1 update in 1 topic

Hi Wojtek, Thanks for the update, I'm glad that it worked from source. I unfortunately haven'

unread,

Re: [Bioxtas Raw] Abridged summary of [email protected] - 1 update in 1 topic

Hi Wojtek, Thanks for the update, I'm glad that it worked from source. I unfortunately haven'

2/6/25

Feng Yu, Jesse Hopkins2

2/6/25

Question about generating P(r) curves with specified r values

Hi, You can do it manually in the IFT interfaces for GNOM and DIFT, if you want. But for that many

unread,

Question about generating P(r) curves with specified r values

Hi, You can do it manually in the IFT interfaces for GNOM and DIFT, if you want. But for that many

2/6/25

Wojciech Starosta

1/29/25

Re: [Bioxtas Raw] Abridged summary of [email protected] - 2 updates in 1 topic >>UWAGA! E-mail spoza domeny Instytutu! Sprawdź nadawcę, nie klikaj w linki ani nie otwieraj załączników, jeśli nie masz pewności czy wiadomość jest bezpieczna<<

Hi Jesse, I have installed RAW from prebuilt binaries RAW-2.3.0-win64.msi downloded from SourceForge.

unread,

Re: [Bioxtas Raw] Abridged summary of [email protected] - 2 updates in 1 topic >>UWAGA! E-mail spoza domeny Instytutu! Sprawdź nadawcę, nie klikaj w linki ani nie otwieraj załączników, jeśli nie masz pewności czy wiadomość jest bezpieczna<<

Hi Jesse, I have installed RAW from prebuilt binaries RAW-2.3.0-win64.msi downloded from SourceForge.

1/29/25

Wojciech Starosta, Jesse Hopkins2

1/29/25

Error while attempting to start RAW on Windows 10 Pro Build 19045, python3.12.8

Hi Wojtek, Please provide the version of RAW you're using and how you installed it (from source,

unread,

Error while attempting to start RAW on Windows 10 Pro Build 19045, python3.12.8

Hi Wojtek, Please provide the version of RAW you're using and how you installed it (from source,

1/29/25

Harshit Yadav, Jesse Hopkins4

1/22/25

Sector Integration of 2D SAXS data

Hi Harshit, The second image pretty clearly doesn't have a config file loaded. EDFs are image

unread,

Sector Integration of 2D SAXS data

Hi Harshit, The second image pretty clearly doesn't have a config file loaded. EDFs are image

1/22/25

Sayre Barron, Jesse Hopkins6

11/22/24

It worked! Not sure why those settings were filled in. Thank you! Sayre On Nov 20, 2024, at 9:26 PM,

unread,

It worked! Not sure why those settings were filled in. Thank you! Sayre On Nov 20, 2024, at 9:26 PM,

11/22/24

Daniel Akwa, Jesse Hopkins2

11/13/24

Bug Report - DENSS ab Initio error code during alignment

Hi Daniel, Could you send me the file you're running the reconstructions on, along with the

unread,

Bug Report - DENSS ab Initio error code during alignment

Hi Daniel, Could you send me the file you're running the reconstructions on, along with the

11/13/24

Isabel Elliott, Jesse Hopkins3

11/7/24

Molecular Weight estimation using Shape&Size method

Hi Jesse, That makes sense - thank you very much for the explanation. Best wishes, Isabel On Tuesday

unread,

Molecular Weight estimation using Shape&Size method

Hi Jesse, That makes sense - thank you very much for the explanation. Best wishes, Isabel On Tuesday

11/7/24

Hailee Scelsi, Jesse Hopkins3

10/28/24

DAMMIF/N Alignment Errors

Hi Jesse, I moved the folder out of Dropbox (thereby also giving it a shorter path) and the problem

unread,

DAMMIF/N Alignment Errors

Hi Jesse, I moved the folder out of Dropbox (thereby also giving it a shorter path) and the problem

10/28/24

Isabel Elliott, Jesse Hopkins5

10/18/24

Ambimeter error

Hi Jesse, Thank you very much for your response. Best wishes, Isabel On Friday 11 October 2024 at 16:

unread,

Ambimeter error

Hi Jesse, Thank you very much for your response. Best wishes, Isabel On Friday 11 October 2024 at 16:

10/18/24

孙亚平, Jesse Hopkins2

10/11/24

Find spot centers and mask images with profiles

Once you have loaded a settings file, you can get information from it as documented here: https://

unread,

Find spot centers and mask images with profiles

Once you have loaded a settings file, you can get information from it as documented here: https://

10/11/24

孙亚平, Jesse Hopkins5

10/11/24

Create a subtracted scattering profile

This is just an example I stole from the documentation. You will need to user filenames and paths

unread,

Create a subtracted scattering profile

This is just an example I stole from the documentation. You will need to user filenames and paths

10/11/24

Feng Yu, … Thomas Grant16

10/11/24

Calculate the chi square with RAW API

Hi Fenz, DENSS.calc_chi2 will do the interpolation and scaling for you. However it's fine to run

unread,

Calculate the chi square with RAW API

Hi Fenz, DENSS.calc_chi2 will do the interpolation and scaling for you. However it's fine to run

10/11/24

Search

Clear search

Close search

Google apps

Main menu