Handling large BLAST results#682
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yannickwurm merged 3 commits intowurmlab:masterfrom Sep 29, 2023
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Just ran npm install and it complained the lockfile format is old and updated it.
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Browsers might struggle to render large result sets. There's no reliable way to know, so pick an arbitrary size and warn the user, giving them a choice of downloading tabular data for local analysis or attempting to render the large result.
Invoking a method that has side-effects (calculating and assigning values, generating files etc) as a part of the initializer makes the objects much harder to test and work with. When working with reports, make result generation explicit, rather than directly invoking it as soon as the object is initialized.
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Sometimes when the queries are large and the database set is big, the search results can take up hundreds of megs or even gigabytes. Sequenceserver has an elegant way to gradually render and visualise large result sets, but it is browser and user machine-dependent whether the browser will be able to hold that many DOM elements on the page without struggling. Add a gentle user warning notifying them about the risk and allowing them to download raw result files and allowing the user to opt-in to a large result render in the browser.
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