sos-bash

SoS extension for Bash scripts. Please refer to SoS Homepage for details.

Installation

• If you are using conda, you can install sos-bash with command

  conda install sos-bash -c conda-forge
  

  This will install sos-bash (and sos-notebook if needed), bash (linux and Mac) or m2-bash (windows), and calysto_bash kernel. The calysto_bash kernel is used instead of bash_kernel because the former supports all operating systems including windows.

• If you are not using conda, you can install sos-bash with command

  pip install sos-bash
  

  but you will have to make sure that your system has bash, and a Jupyter kernel for bash. sos-bash currently supports bash_kernel and calysto_bash kernel.

Usage

In a SoS notebook, you should be able to see Bash in the drop down box, and execute bash commands in it. You can use magics %get and %put to exchange variables between bash and other kernels but all variables will be converted to string because bash only supports strings.