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cleanup spack.parse.Lexer#29093

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cosmicexplorer wants to merge 11 commits intospack:developfrom
cosmicexplorer:arbitrary-lexer-modes
Closed

cleanup spack.parse.Lexer#29093
cosmicexplorer wants to merge 11 commits intospack:developfrom
cosmicexplorer:arbitrary-lexer-modes

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@cosmicexplorer cosmicexplorer commented Feb 20, 2022

Problem

The SpecLexer works fine, but is a little hard to extend, which we may wish to do when expanding the spec syntax as in #24025.

Solution

  • Rewrite the Lexer interface to allow navigation between multiple lexer modes by name.
  • Also avoid the need to manually write out lambda scanner, val: ... in subclasses of Lexer for a more declarative interface.

Result

The spec lexing code should be a little easier to follow. The path to extend the spec syntax as proposed in #20256 (comment) should also be more clear now.

@cosmicexplorer cosmicexplorer force-pushed the arbitrary-lexer-modes branch 2 times, most recently from 2301397 to d6ba961 Compare February 20, 2022 03:49
@cosmicexplorer cosmicexplorer marked this pull request as draft February 20, 2022 13:34
@cosmicexplorer cosmicexplorer force-pushed the arbitrary-lexer-modes branch 3 times, most recently from 7cbca98 to 82cf8df Compare March 2, 2022 06:11
@spackbot-app spackbot-app bot added the tests General test capability(ies) label Mar 2, 2022
@cosmicexplorer cosmicexplorer changed the title named spec lexer modes cleanup spack.parse.Lexer Mar 2, 2022
@cosmicexplorer cosmicexplorer force-pushed the arbitrary-lexer-modes branch from 82cf8df to df0496e Compare April 3, 2022 11:47
@spackbot-app spackbot-app bot added the core PR affects Spack core functionality label Sep 29, 2022
@cosmicexplorer cosmicexplorer marked this pull request as ready for review September 29, 2022 21:06
@cosmicexplorer cosmicexplorer force-pushed the arbitrary-lexer-modes branch 2 times, most recently from 51084a1 to 905221c Compare September 29, 2022 22:44
(
r"\@([\w.\-]*\s*)*(\s*\=\s*\w[\w.\-]*)?",
lambda scanner, val: self.token(VER, val),
"BEGIN_PHASE",
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This bit is really the entire point of this change. Essentially, instead of manually typing out lambdas in our actual lexer specification, we have a more declarative interface.

_windows_filename_prefix = r"([A-Za-z]:)*?"
# Spec strings require posix-style paths on Windows
# because the result is later passed to shlex.
_windows_filename_re = _windows_filename_prefix + _filename_re_base
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I haven't changed any of the actual strings here whatsoever, I've just moved them to the top level.

"BEGIN_PHASE",
[
# '@': begin a Version, VersionRange, or VersionList:
(r"@([\w.\-]*\s*)*(\s*\=\s*\w[\w.\-]*)?", VER),
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The only actual change I made to any of these strings is to remove the backslash from r"\@" here since the backslash is simply ignored for any non-metacharacters.

# Gobble up all remaining whitespace between tokens.
(r"\s+", None),
],
{"EQUALS_PHASE": [EQ]},
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This was the other important reason for this change. imo it was really unclear how the list of tuples we have now ends up triggering changes in the lexer mode, because we were relying on the implementation detail of only allowing exactly two modes.

While we do not add any new modes in this specific change, this makes it a little easier for us to extend the spec syntax later e.g. by having more complex compiler specs. I recall @alalazo was working on exactly that (how to add a new element to spec syntax for compiler specs) a while ago and I think the refactoring in this PR will make that effort easier in the future.

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I was referring to this element of the virtual provider selection changes at #15569 (comment)!

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codecov/project is failing, but codecov/patch is not. I could definitely add some further test cases triggering LexError if that would be helpful, but I was hoping that the existing tests would be enough to validate this refactoring change.

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Every test is passing except unit-tests / macos (3.8): https://github.com/spack/spack/actions/runs/3155071691/jobs/5133403157, which I expect is intermittent or not related to my code. Therefore, this is ready for review.

@becker33
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I really like the big picture here!

In the details, I think there's a better way to set up the constructor for the Lexer object. I don't have time to get into the weeds of this before I leave this evening but I'll try to take a look at the details soon.

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@becker33: Yes! Would really love input on the Lexer ctor since the purpose of this change is to make that better. No rush to get back.

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Noting a discussion with @trws and @psakievich over slack just now on how it's kinda difficult to handle flags reliably, stemming from #32257. In working on this change yesterday I was struck with how when you pass a string to the Spec('%clang cxxflags="-stdlib=c++"') constructor, it first shlexes it (which removes the double quotes), then sends each individual element to the lexer as SpecLexer().lex(['%clang', 'cxxflags=-stdlib=c++']).

I absolutely think that the lexer should be doing the splitting here itself and I believe that doing that might make it easier to rely on specs being able to safely serialize and deserialize without breaking. I probably will not try to do it in this change, but in a separate one that modifies the control flow between the lexer and the parser.

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Super helpful rundown from @becker33 on the lex/parse architectural constraints:

So the shlex craziness comes from my original PR to support compiler flags — the easy way to do it required the argument to the lexer to arrive quoted, which required escaped quotes on the command line. That was doable without any shlex madness, but we wanted users to be able to use normal quotes on the command line, without losing the ability to round-trip specs through the str method without losing compiler flag information

That required some way to unify the parsing between things that come in as a single string (internally from within python) and things that come in as CLI args

shlex madness was my solution to that at the time (2015-16)

If there's any useful refactoring I can figure out on that front (in a separate PR) I'll keep this goal in mind.

@tgamblin
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tgamblin commented Sep 30, 2022

@cosmicexplorer: I agree with @becker33 this is a good direction. One question: how's the performance? Spec parsing is a bottleneck for importing everything (basically we parse a lot of specs in package.py directives). Does this impact import performance (I suspect not but you never know)?

You can probably test it like this (this imports all the packages):

$ spack -p python -c 'import spack.repo; list(spack.repo.path.all_package_classes())'

I get shlex.read_token as the most time-consuming part of package import when I do that on my M1 macbook.

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cosmicexplorer commented Oct 5, 2022

@tgamblin: I believe the overall runtime regresses ~0.56%, and the performance of lex_word appears to be the culprit, probably due to the additional overhead of indexing into a dict when switching modes. I think we should still take this change, since the regression is extremely small and the resulting code seems more readable and maintainable. However, I am somewhat confident that removing the shlex.split() preprocessing (as per above comments) would make up for the regression, so I can look into that before we merge this change if you'd like.

Methodology and perf regression specifics below. Important points in bold.

Overall Runtime

Wall-clock time seems to stay mostly constant at around 23.5 seconds, regressing ~.1318 seconds, or 0.56%. This PR's mean time was 23.4924, while develop was slightly lower at 23.3606 over 5 consecutive runs:

# cosmicexplorer@terrestrial-gamma-ray-flash: ~/tools/s1 23:55:33 
; for _ in $(seq 5); do time (spack python -c 'import spack.repo; list(spack.repo.path.all_package_classes())' >/dev/null); done
  22.75s user 0.38s system 100% cpu 23.133 total
( spack python -c  > /dev/null; )  22.75s user 0.38s system 99% cpu 23.133 total
  23.18s user 0.36s system 100% cpu 23.535 total
( spack python -c  > /dev/null; )  23.18s user 0.36s system 99% cpu 23.536 total
  23.19s user 0.38s system 99% cpu 23.571 total
( spack python -c  > /dev/null; )  23.19s user 0.38s system 99% cpu 23.572 total
  23.19s user 0.37s system 99% cpu 23.555 total
( spack python -c  > /dev/null; )  23.19s user 0.37s system 99% cpu 23.556 total
  23.30s user 0.37s system 99% cpu 23.665 total
( spack python -c  > /dev/null; )  23.30s user 0.37s system 99% cpu 23.665 total
# cosmicexplorer@terrestrial-gamma-ray-flash: ~/tools/s1 23:57:50 
; git checkout develop
Switched to branch 'develop'
Your branch is up to date with 'upstream/develop'.
# cosmicexplorer@terrestrial-gamma-ray-flash: ~/tools/s1 23:57:55 
; for _ in $(seq 5); do time (spack python -c 'import spack.repo; list(spack.repo.path.all_package_classes())' >/dev/null); done
  23.14s user 0.35s system 100% cpu 23.486 total
( spack python -c  > /dev/null; )  23.14s user 0.35s system 100% cpu 23.487 total
  23.14s user 0.35s system 100% cpu 23.488 total
( spack python -c  > /dev/null; )  23.14s user 0.35s system 99% cpu 23.489 total
  22.63s user 0.36s system 99% cpu 22.985 total
( spack python -c  > /dev/null; )  22.63s user 0.36s system 99% cpu 22.985 total
  22.91s user 0.37s system 99% cpu 23.282 total
( spack python -c  > /dev/null; )  22.91s user 0.37s system 99% cpu 23.283 total
  23.19s user 0.37s system 100% cpu 23.558 total
( spack python -c  > /dev/null; )  23.19s user 0.37s system 99% cpu 23.559 total

The above shell commands and output were generated after maybe 5-10 "warm-up" runs running the same command. Without the warm-up runs, the runtime was around 33 seconds, which is what we see in the profiled runs below. I felt comfortable using the profile output regardless, since I assumed that the warm-up would only affect e.g. kernel filesystem caches, and not the performance of parsing itself.

Method-level Profiling

In this section we try to identify where that additional ~.13 seconds comes from, and can tentatively attribute it to lex_word.

If this change is correct, none of the regex matching or shlex performance should change, since the new SpecLexer() constructor should produce the exact same re.Scanner as on develop, and calls shlex.split() in the exact same way. If the performance does change, I would expect it to be in parse.py methods.

This hypothesis is tentatively proven correct below.

Profile Excerpt

I ran the same spack command as above with -p --lines 40 to get the top 40 functions. I'm first going to show an excerpt of the outputs for just a few methods that seem important:

Branch: arbitrary-lexer-modes
   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
   152543    0.685    0.000    1.662    0.000 /usr/lib/python3.10/re.py:364(scan)
152543/115311    0.406    0.000    2.113    0.000 lib/spack/spack/parse.py:87(lex_word)
   440197    0.301    0.000    0.301    0.000 {method 'match' of '_sre.SRE_Scanner' objects}
   287654    0.269    0.000    0.405    0.000 lib/spack/spack/parse.py:76(token)
    99683    0.220    0.000    5.186    0.000 lib/spack/spack/parse.py:188(setup)

Branch: develop
   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
   152543    0.774    0.000    1.715    0.000 /usr/lib/python3.10/re.py:364(scan)
152543/115311    0.286    0.000    2.017    0.000 lib/spack/spack/parse.py:59(lex_word)
   440197    0.281    0.000    0.281    0.000 {method 'match' of '_sre.SRE_Scanner' objects}
   287654    0.263    0.000    0.394    0.000 lib/spack/spack/parse.py:53(token)
    99683    0.226    0.000    6.249    0.000 lib/spack/spack/parse.py:149(setup)

If I'm interpreting the cProfile output correctly, lex_word goes from 0.286 to 0.406 seconds of total runtime (+0.12 seconds) in the single profiled run I performed on both branches, which aligns very closely with the regression in overall runtime (0.12 vs 0.1318). Especially since lex_word introduces a dict lookup in this PR vs an integer subtraction on develop, it makes sense that this method would produce the regression. Anecdotally, the other method runtimes seem to stay within the same distribution as I repeat profiled runs regardless of branch, while lex_word seems to reliably regress around 0.12 seconds each time.

Top 40 Profile Output

This is the precise command line, wall-clock time, and cProfile output I used to produce the above excerpt.

On arbitrary-lexer-modes:

; spack -p --lines 40 python -c 'import spack.repo; list(spack.repo.path.all_package_classes())'
...
   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
   214994    1.760    0.000    2.062    0.000 /usr/lib/python3.10/shlex.py:133(read_token)
    55885    1.394    0.000    2.987    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:3895(_dup_deps)
147481/145199    1.253    0.000   13.106    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:1188(__init__)
    99683    0.897    0.000    0.940    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:136(__init__)
   152543    0.685    0.000    1.662    0.000 /usr/lib/python3.10/re.py:364(scan)
1932561/1774121    0.609    0.000    2.760    0.000 /home/cosmicexplorer/tools/s1/lib/spack/llnl/util/lang.py:301(<genexpr>)
543512/413500    0.589    0.000    3.238    0.000 /home/cosmicexplorer/tools/s1/lib/spack/llnl/util/lang.py:299(tuplify)
539311/539010    0.528    0.000    1.063    0.000 {built-in method builtins.sorted}
55896/55885    0.502    0.000    4.836    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:3803(_dup)
   203862    0.490    0.000    0.526    0.000 /usr/lib/python3.10/_collections_abc.py:839(values)
383198/164530    0.425    0.000    0.739    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:277(remove_directives)
  2863848    0.412    0.000    0.475    0.000 {built-in method builtins.isinstance}
152543/115311    0.406    0.000    2.113    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:87(lex_word)
67945/66791    0.379    0.000    1.703    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:1630(traverse_edges)
946895/946893    0.377    0.000    0.377    0.000 {built-in method builtins.iter}
   406754    0.374    0.000    0.374    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:832(__init__)
  1483350    0.352    0.000    0.538    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:4066(_cmp_iter)
    49933    0.347    0.000    0.398    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:1137(__eq__)
    58286    0.339    0.000   20.369    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:357(_depends_on)
    99683    0.316    0.000    0.325    0.000 /usr/lib/python3.10/shlex.py:21(__init__)
  1086673    0.313    0.000    0.317    0.000 {built-in method builtins.setattr}
   440197    0.301    0.000    0.301    0.000 {method 'match' of '_sre.SRE_Scanner' objects}
    99683    0.294    0.000    1.234    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:5078(__init__)
   741440    0.282    0.000    0.934    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:158(accept)
   101965    0.275    0.000    3.334    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:5268(spec)
   287654    0.269    0.000    0.405    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:76(token)
   298198    0.268    0.000    1.070    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:939(__init__)
730956/150599    0.248    0.000    1.910    0.000 {built-in method builtins.hash}
    99683    0.244    0.000    4.079    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:5090(do_parse)
1508634/1037026    0.244    0.000    0.338    0.000 {built-in method builtins.len}
   192351    0.243    0.000    0.479    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:1171(_string_to_version)
    93991    0.228    0.000    0.489    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:254(_generate_seperators_and_components)
    99683    0.222    0.000    2.874    0.000 /usr/lib/python3.10/shlex.py:305(split)
    99683    0.220    0.000    5.186    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:188(setup)
    82265    0.219    0.000    1.711    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:248(_wrapper)
   201583    0.213    0.000    0.213    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:285(<genexpr>)
270558/128316    0.205    0.000    0.776    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:107(coercing_method)
   530638    0.180    0.000    0.335    0.000 /usr/lib/python3.10/_collections_abc.py:904(__iter__)
  1018780    0.174    0.000    0.174    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/hash_types.py:31(attr)
   437395    0.174    0.000    0.243    0.000 /usr/lib/python3.10/_collections_abc.py:835(items)


  32.92s user 0.40s system 99% cpu 33.334 total

On develop:

; spack -p --lines 40 python -c 'import spack.repo; list(spack.repo.path.all_package_classes())'
...
   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
   214994    1.751    0.000    2.049    0.000 /usr/lib/python3.10/shlex.py:133(read_token)
147481/145199    1.189    0.000   12.720    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:1188(__init__)
55896/55885    1.108    0.000    4.482    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:3803(_dup)
    99683    1.080    0.000    1.089    0.000 /usr/lib/python3.10/shlex.py:21(__init__)
   152543    0.774    0.000    1.715    0.000 /usr/lib/python3.10/re.py:364(scan)
   203377    0.727    0.000    0.759    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:745(__init__)
1932561/1774121    0.587    0.000    2.653    0.000 /home/cosmicexplorer/tools/s1/lib/spack/llnl/util/lang.py:301(<genexpr>)
543512/413500    0.572    0.000    3.117    0.000 /home/cosmicexplorer/tools/s1/lib/spack/llnl/util/lang.py:299(tuplify)
383198/164530    0.565    0.000    0.866    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:277(remove_directives)
270558/128316    0.557    0.000    0.803    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:107(coercing_method)
    55885    0.473    0.000    1.607    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:3895(_dup_deps)
  2863848    0.399    0.000    0.462    0.000 {built-in method builtins.isinstance}
   192351    0.391    0.000    0.625    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:1171(_string_to_version)
539311/539010    0.382    0.000    0.890    0.000 {built-in method builtins.sorted}
67945/66791    0.377    0.000    1.238    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:1630(traverse_edges)
    69008    0.344    0.000    0.525    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:880(select)
  1483350    0.336    0.000    0.518    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:4066(_cmp_iter)
    82265    0.333    0.000    1.930    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:248(_wrapper)
    58286    0.323    0.000   20.141    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:357(_depends_on)
  1086673    0.302    0.000    0.306    0.000 {built-in method builtins.setattr}
152543/115311    0.286    0.000    2.017    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:59(lex_word)
   440197    0.281    0.000    0.281    0.000 {method 'match' of '_sre.SRE_Scanner' objects}
   741440    0.275    0.000    0.459    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:119(accept)
   101965    0.268    0.000    3.069    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:5247(spec)
   287654    0.263    0.000    0.394    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:53(token)
   298198    0.262    0.000    1.196    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:939(__init__)
730956/150599    0.241    0.000    1.825    0.000 {built-in method builtins.hash}
    99683    0.235    0.000    3.728    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:5069(do_parse)
    93991    0.230    0.000    0.485    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/version.py:254(_generate_seperators_and_components)
1508634/1037026    0.229    0.000    0.319    0.000 {built-in method builtins.len}
    99683    0.226    0.000    6.249    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/parse.py:149(setup)
    99683    0.217    0.000    3.618    0.000 /usr/lib/python3.10/shlex.py:305(split)
   406754    0.213    0.000    0.213    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:832(__init__)
   201583    0.203    0.000    0.203    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/directives.py:285(<genexpr>)
    66627    0.186    0.000    0.723    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/spec.py:1343(edges_to_dependencies)
1046578/1046576    0.179    0.000    0.179    0.000 {built-in method builtins.iter}
   530638    0.172    0.000    0.361    0.000 /usr/lib/python3.10/_collections_abc.py:904(__iter__)
  1018780    0.171    0.000    0.171    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/hash_types.py:31(attr)
   203377    0.167    0.000    0.205    0.000 /home/cosmicexplorer/tools/s1/lib/spack/spack/variant.py:534(__init__)
   437395    0.165    0.000    0.227    0.000 /usr/lib/python3.10/_collections_abc.py:835(items)


  31.87s user 0.37s system 99% cpu 32.247 total

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I think we can pause reviewing this one for now, since the biggest benefit of this PR would be to enable #33016. I still have a bit more to do on that one, but when I can demonstrate that #33016 conclusively improves spec parsing, I think it will be easier to sign off on this component of that larger change.

@cosmicexplorer cosmicexplorer marked this pull request as draft October 5, 2022 16:52
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alalazo commented Feb 20, 2023

Superseded by #34151

@alalazo alalazo closed this Feb 20, 2023
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4 participants