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MFEM : Optimization flag being ignored #6745

@junkudo

Description

@junkudo

My command line optimization flag is being over-written by the MFEM build.
Spack command:

spack -d install -v [email protected]%[email protected] cflags="-g -O0" cppflags="-g -O0" cxxflags="-g -O0" fflags="-g -O0" ~debug~examples~gzstream+hypre+lapack~miniapps~mpfr+mpi+netcdf~openmp~petsc~suite-sparse~sundials~superlu-dist~threadsafe arch=linux-rhel7-x86_64

Spack debug output snippet:

[cc] /usr/tce/packages/intel/intel-16.0.3/bin/icpc -I/usr/tce/packages/mvapich2/mvapich2-2.3-intel-16.0.3/include -I/g/g14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/zlib-1.2.11-hhe7xrd6rlf7afevulaptctrum3673we/include -I/g/g\
14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/hypre-2.12.1-3asacyzbswxnimncl3jfad6gq2tizfap/include -I/g/g14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/metis-4.0.3-sacetyhy56rhqu6ggx3hzjfcwsaxs5t3/include -I/g/g14/\
kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/netcdf-4.4.1.1-6h45mookfhf7u5grqknfb5uc7dz2h5pz/include -I/g/g14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/hdf5-1.10.1-soxcwgh2bnzzqmq5bvhvplysjxtizrfx/include -g -O0 -g \
-O0 -g -O3 -I/g/g14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/hypre-2.12.1-3asacyzbswxnimncl3jfad6gq2tizfap/include -I/g/g14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/metis-4.0.3-sacetyhy56rhqu6ggx3hzjfcwsaxs5t3/\
include -I/usr/lib64/include -I/g/g14/kudo4/spack/opt/spack/linux-rhel7-x86_64/intel-16.0.3/netcdf-4.4.1.1-6h45mookfhf7u5grqknfb5uc7dz2h5pz/include -c general/array.cpp -o general/array.o -I/usr/tce/packages/mvapich2/mvapich2-2.3-intel-\
16.0.3/include

Note the -O3 being introduced.

Information on your system

Platform : TOSS3/TOSS (Tri-Lab Operating System Stack)

Relevant configuration details:
compilers.yaml

compilers:
- compiler:
    environment: {}
    extra_rpaths: []
    modules: []
    operating_system: rhel7
    paths:
      cc: /usr/tce/packages/intel/intel-16.0.3/bin/icc
      cxx: /usr/tce/packages/intel/intel-16.0.3/bin/icpc
      f77: /usr/tce/packages/intel/intel-16.0.3/bin/ifort
      fc: /usr/tce/packages/intel/intel-16.0.3/bin/ifort
    flags: {}
    spec: [email protected]
    target: x86_64

packages.yaml:

packages:
  all:
    compiler: [intel, gcc, pgi, clang, xl, nag]
    providers:
      mpi: [mvapich2]
      blas: [netlib-lapack]
      lapack: [netlib-lapack]
  metis:
    version: [4.0.3]
  netlib-lapack:
    paths:
      [email protected]: /usr/lib64/
    buildable: False
  mvapich2:
    paths:
      [email protected]: /usr/tce/packages/mvapich2/mvapich2-2.3-intel-16.0.3/
    buildable: False
  mpich:
    buildable: False
  openmpi:
    buildable: False
  intel-mpi:
    buildable: False
  spectrum-mpi:
    buildable: False
  intel-parallel-studio:
    buildable: False
  cmake:
    paths:
      [email protected] arch=linux-rhel7-x86_64: /usr/tce/packages/cmake/cmake-3.5.2/
    buildable: False
  pkg-config:
    paths:
      [email protected] arch=linux-rhel7-x86_64: /usr/bin/
    buildable: False
  m4:
    paths:
      [email protected] arch=linux-rhe17-x86_64: /usr/bin/
    buildable: False

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