$ spack spec [email protected]
- [email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[e] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[e] ^[email protected]%[email protected]~cluster+envmods~gfortran~ilp64+shared build_system=generic mpi_family=none threads=none arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]+internal_glib build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~guile build_system=generic patches=ca60bd9,fe5b60d arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=generic arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip patches=0f0b1bd arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip patches=873745d arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=generic arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]+ipo build_system=cmake build_type=Release generator=ninja arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~doc+ncurses+ownlibs~qtgui build_system=generic build_type=Release patches=dbc3892 arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~gssapi~ldap~libidn2~librtmp~libssh~libssh2+nghttp2 build_system=autotools libs=shared,static tls=openssl arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[e] ^[email protected]%[email protected]+re2c build_system=generic arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=python_pip arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=generic arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]+bz2+crypt+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tkinter+uuid+zlib build_system=generic patches=13fa8bf,b0615b2,ebdca64,f2fd060 arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~debug~pic+shared build_system=generic arch=linux-ubuntu22.04-zen2
[e] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]+libbsd build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[e] ^[email protected]%[email protected]+bzip2+curses+git~libunistring+libxml2+pic+shared+tar+xz build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~obsolete_api build_system=autotools patches=4885da3 arch=linux-ubuntu22.04-zen2
[e] ^[email protected]%[email protected]~cpanm+opcode+open+shared+threads build_system=generic arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~symlinks+termlib abi=none build_system=autotools patches=7a351bc arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~docs+shared build_system=generic certs=mozilla arch=linux-ubuntu22.04-zen2
[+] ^ca-certificates-mozilla@2023-05-30%[email protected] build_system=generic arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools patches=bbf97f1 arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]+column_metadata+dynamic_extensions+fts~functions+rtree build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]~pic build_system=autotools libs=shared,static arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected]+compat~new_strategies+opt+pic+shared build_system=autotools arch=linux-ubuntu22.04-zen2
[+] ^[email protected]%[email protected] build_system=generic arch=linux-ubuntu22.04-zen2
==> Installing py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf [241/265]
==> No binary for py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf found: installing from source
==> Warning: Intel's compilers may or may not optimize to the same degree for non-Intel microprocessors for optimizations that are not unique to Intel microprocessors
==> Fetching file:///home/ubuntu/spack-stack/source-cache/_source-cache/archive/5a/5a275584e726026a5699459aa72f828a610821006228e841b94275c4a7c08417.tar.gz
==> No patches needed for py-scipy
==> py-scipy: Executing phase: 'install'
==> [2024-12-20-17:12:03.773940] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:03.774300] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:03.774745] Find (max depth = None): ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:03.774876] Find complete: ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:03.774984] Find (max depth = None): ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:03.788244] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:04.007265] Find complete: ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:04.007376] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:04.007478] Find complete: ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:04.007557] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:04.019466] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:04.229932] Find complete: ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:04.230036] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:04.230107] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:04.230141] Find complete: ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:04.230208] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:04.230384] Find complete: ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:04.230463] Find (max depth = None): ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:04.230548] Find complete: ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:04.230622] Find (max depth = None): ['/lib'] ['libm.so']
==> [2024-12-20-17:12:04.242662] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:04.452868] Find complete: ['/lib'] ['libm.so']
==> [2024-12-20-17:12:04.452985] Find (max depth = None): ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:04.453089] Find complete: ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:04.453164] Find (max depth = None): ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:04.464993] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:04.676573] Find complete: ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:04.676676] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:04.676771] Find complete: ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:04.676844] Find (max depth = None): ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:04.688444] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:04.895674] Find complete: ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:04.895772] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:04.895838] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:04.895872] Find complete: ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:04.895932] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:04.896102] Find complete: ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:04.897098] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:04.897321] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:04.897583] Find (max depth = None): ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:04.897681] Find complete: ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:04.897755] Find (max depth = None): ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:04.909601] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:05.117597] Find complete: ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:05.117696] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:05.117792] Find complete: ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:05.117867] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:05.129052] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:05.336329] Find complete: ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:05.336430] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:05.336498] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:05.336534] Find complete: ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:05.336597] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:05.336764] Find complete: ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:05.336838] Find (max depth = None): ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:05.336916] Find complete: ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:05.336984] Find (max depth = None): ['/lib'] ['libm.so']
==> [2024-12-20-17:12:05.348765] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:05.556511] Find complete: ['/lib'] ['libm.so']
==> [2024-12-20-17:12:05.556617] Find (max depth = None): ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:05.556710] Find complete: ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:05.556783] Find (max depth = None): ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:05.568366] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:05.778284] Find complete: ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:05.778382] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:05.778476] Find complete: ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:05.778551] Find (max depth = None): ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:05.789805] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:05.996405] Find complete: ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:05.996508] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:05.996577] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:05.996611] Find complete: ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:05.996676] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:05.996846] Find complete: ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:06.005744] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:06.005972] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:06.006232] Find (max depth = None): ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:06.006332] Find complete: ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:06.006405] Find (max depth = None): ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:06.018110] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:06.227814] Find complete: ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:06.227916] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:06.228015] Find complete: ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:06.228089] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:06.239370] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:06.444660] Find complete: ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:06.444764] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:06.444836] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:06.444870] Find complete: ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:06.444933] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:06.445108] Find complete: ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:06.445185] Find (max depth = None): ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:06.445272] Find complete: ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:06.445343] Find (max depth = None): ['/lib'] ['libm.so']
==> [2024-12-20-17:12:06.456935] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:06.665707] Find complete: ['/lib'] ['libm.so']
==> [2024-12-20-17:12:06.665813] Find (max depth = None): ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:06.665908] Find complete: ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:06.665982] Find (max depth = None): ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:06.677487] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:06.885857] Find complete: ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:06.885959] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:06.886054] Find complete: ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:06.886129] Find (max depth = None): ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:06.897508] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:07.102447] Find complete: ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:07.102546] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:07.102612] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:07.102650] Find complete: ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:07.102711] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:07.102877] Find complete: ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:07.103702] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:07.103919] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl_core.so']
==> [2024-12-20-17:12:07.104179] Find (max depth = None): ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:07.104276] Find complete: ['/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:07.104348] Find (max depth = None): ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:07.115812] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:07.323517] Find complete: ['/lib'] ['libpthread.so']
==> [2024-12-20-17:12:07.323620] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:07.323721] Find complete: ['/usr/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:07.323797] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:07.334910] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:07.539997] Find complete: ['/usr/lib'] ['libpthread.so']
==> [2024-12-20-17:12:07.540103] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:07.540173] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:07.540205] Find complete: ['/usr/local/lib64'] ['libpthread.so']
==> [2024-12-20-17:12:07.540267] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:07.540433] Find complete: ['/usr/local/lib'] ['libpthread.so']
==> [2024-12-20-17:12:07.540508] Find (max depth = None): ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:07.540587] Find complete: ['/lib64'] ['libm.so']
==> [2024-12-20-17:12:07.540656] Find (max depth = None): ['/lib'] ['libm.so']
==> [2024-12-20-17:12:07.552092] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:07.761054] Find complete: ['/lib'] ['libm.so']
==> [2024-12-20-17:12:07.761198] Find (max depth = None): ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:07.761328] Find complete: ['/lib64'] ['libdl.so']
==> [2024-12-20-17:12:07.761429] Find (max depth = None): ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:07.773091] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
==> [2024-12-20-17:12:07.982340] Find complete: ['/lib'] ['libdl.so']
==> [2024-12-20-17:12:07.982465] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:07.982596] Find complete: ['/usr/lib64'] ['libdl.so']
==> [2024-12-20-17:12:07.982695] Find (max depth = None): ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:07.993899] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
==> [2024-12-20-17:12:08.199313] Find complete: ['/usr/lib'] ['libdl.so']
==> [2024-12-20-17:12:08.199438] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:08.199530] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
==> [2024-12-20-17:12:08.199583] Find complete: ['/usr/local/lib64'] ['libdl.so']
==> [2024-12-20-17:12:08.199679] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:08.199892] Find complete: ['/usr/local/lib'] ['libdl.so']
==> [2024-12-20-17:12:08.201059] '/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/python-venv-1.0-bksheuy/bin/python3' '-m' 'pip' '-vvv' '--no-input' '--no-cache-dir' '--disable-pip-version-check' 'install' '--no-deps' '--ignore-installed' '--no-build-isolation' '--no-warn-script-location' '--no-index' '--prefix=/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-scipy-1.14.1-dlaepp5' '--config-settings=builddir=build' '--config-settings=compile-args=-j16' '--config-settings=setup-args=-Dfortran_std=legacy' '--config-settings=setup-args=-Dblas=mkl-dynamic-lp64-seq' '--config-settings=setup-args=-Dlapack=mkl-dynamic-lp64-seq' '.'
Using pip 23.1.2 from /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip (python 3.11)
Non-user install due to --prefix or --target option
Ignoring indexes: https://pypi.org/simple
Created temporary directory: /tmp/pip-build-tracker-bwd_jjhn
Initialized build tracking at /tmp/pip-build-tracker-bwd_jjhn
Created build tracker: /tmp/pip-build-tracker-bwd_jjhn
Entered build tracker: /tmp/pip-build-tracker-bwd_jjhn
Created temporary directory: /tmp/pip-install-sqiq838d
Created temporary directory: /tmp/pip-ephem-wheel-cache-usdr10ju
Processing /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src
Added file:///home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src to build tracker '/tmp/pip-build-tracker-bwd_jjhn'
Created temporary directory: /tmp/pip-modern-metadata-ks3g4dae
Preparing metadata (pyproject.toml): started
Running command Preparing metadata (pyproject.toml)
+ meson setup /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src/build -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md -Dfortran_std=legacy -Dblas=mkl-dynamic-lp64-seq -Dlapack=mkl-dynamic-lp64-seq --native-file=/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src/build/meson-python-native-file.ini
The Meson build system
Version: 1.5.1
Source dir: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src
Build dir: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src/build
Build type: native build
Project name: scipy
Project version: 1.14.1
../meson.build:1:0: ERROR: None of values ['c17'] are supported by the C compiler. Possible values for option "C_std" are ['none', 'c89', 'c99', 'c11', 'gnu89', 'gnu99', 'gnu11']
A full log can be found at /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src/build/meson-logs/meson-log.txt
error: subprocess-exited-with-error
× Preparing metadata (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
full command: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/python-venv-1.0-bksheuy/bin/python3 /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpdjbwkzld
cwd: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src
Preparing metadata (pyproject.toml): finished with status 'error'
error: metadata-generation-failed
× Encountered error while generating package metadata.
╰─> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
Exception information:
Traceback (most recent call last):
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/operations/build/metadata.py", line 35, in generate_metadata
distinfo_dir = backend.prepare_metadata_for_build_wheel(metadata_dir)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/utils/misc.py", line 713, in prepare_metadata_for_build_wheel
return super().prepare_metadata_for_build_wheel(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_impl.py", line 186, in prepare_metadata_for_build_wheel
return self._call_hook('prepare_metadata_for_build_wheel', {
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_impl.py", line 311, in _call_hook
self._subprocess_runner(
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/utils/subprocess.py", line 252, in runner
call_subprocess(
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
raise error
pip._internal.exceptions.InstallationSubprocessError: Preparing metadata (pyproject.toml) exited with 1
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/cli/base_command.py", line 169, in exc_logging_wrapper
status = run_func(*args)
^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
return func(self, options, args)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/commands/install.py", line 377, in run
requirement_set = resolver.resolve(
^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 73, in resolve
collected = self.factory.collect_root_requirements(root_reqs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 491, in collect_root_requirements
req = self._make_requirement_from_install_req(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 453, in _make_requirement_from_install_req
cand = self._make_candidate_from_link(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
self._link_candidate_cache[link] = LinkCandidate(
^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
super().__init__(
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
self.dist = self._prepare()
^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
dist = self._prepare_distribution()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/operations/prepare.py", line 516, in prepare_linked_requirement
return self._prepare_linked_requirement(req, parallel_builds)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/operations/prepare.py", line 631, in _prepare_linked_requirement
dist = _get_prepared_distribution(
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
abstract_dist.prepare_distribution_metadata(
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
self.req.prepare_metadata()
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/req/req_install.py", line 555, in prepare_metadata
self.metadata_directory = generate_metadata(
^^^^^^^^^^^^^^^^^^
File "/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/[padded-to-200-chars]/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_internal/operations/build/metadata.py", line 37, in generate_metadata
raise MetadataGenerationFailed(package_details=details) from error
pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
Removed file:///home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-src from build tracker '/tmp/pip-build-tracker-bwd_jjhn'
Removed build tracker: '/tmp/pip-build-tracker-bwd_jjhn'
==> Error: ProcessError: Command exited with status 1:
'/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_p/intel/2021.10.0/python-venv-1.0-bksheuy/bin/python3' '-m' 'pip' '-vvv' '--no-input' '--no-cache-dir' '--disable-pip-version-check' 'install' '--no-deps' '--ignore-installed' '--no-build-isolation' '--no-warn-script-location' '--no-index' '--prefix=/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_p/intel/2021.10.0/py-scipy-1.14.1-dlaepp5' '--config-settings=builddir=build' '--config-settings=compile-args=-j16' '--config-settings=setup-args=-Dfortran_std=legacy' '--config-settings=setup-args=-Dblas=mkl-dynamic-lp64-seq' '--config-settings=setup-args=-Dlapack=mkl-dynamic-lp64-seq' '.'
22 errors found in build log:
1 ==> py-scipy: Executing phase: 'install'
2 ==> [2024-12-20-17:12:03.773940] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so
', 'libmkl_core.so']
3 ==> [2024-12-20-17:12:03.774300] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl
_core.so']
4 ==> [2024-12-20-17:12:03.774745] Find (max depth = None): ['/lib64'] ['libpthread.so']
5 ==> [2024-12-20-17:12:03.774876] Find complete: ['/lib64'] ['libpthread.so']
6 ==> [2024-12-20-17:12:03.774984] Find (max depth = None): ['/lib'] ['libpthread.so']
>> 7 ==> [2024-12-20-17:12:03.788244] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
8 ==> [2024-12-20-17:12:04.007265] Find complete: ['/lib'] ['libpthread.so']
9 ==> [2024-12-20-17:12:04.007376] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
10 ==> [2024-12-20-17:12:04.007478] Find complete: ['/usr/lib64'] ['libpthread.so']
11 ==> [2024-12-20-17:12:04.007557] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
>> 12 ==> [2024-12-20-17:12:04.019466] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
13 ==> [2024-12-20-17:12:04.229932] Find complete: ['/usr/lib'] ['libpthread.so']
14 ==> [2024-12-20-17:12:04.230036] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
15 ==> [2024-12-20-17:12:04.230107] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
16 ==> [2024-12-20-17:12:04.230141] Find complete: ['/usr/local/lib64'] ['libpthread.so']
17 ==> [2024-12-20-17:12:04.230208] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
18 ==> [2024-12-20-17:12:04.230384] Find complete: ['/usr/local/lib'] ['libpthread.so']
19 ==> [2024-12-20-17:12:04.230463] Find (max depth = None): ['/lib64'] ['libm.so']
20 ==> [2024-12-20-17:12:04.230548] Find complete: ['/lib64'] ['libm.so']
21 ==> [2024-12-20-17:12:04.230622] Find (max depth = None): ['/lib'] ['libm.so']
>> 22 ==> [2024-12-20-17:12:04.242662] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
23 ==> [2024-12-20-17:12:04.452868] Find complete: ['/lib'] ['libm.so']
24 ==> [2024-12-20-17:12:04.452985] Find (max depth = None): ['/lib64'] ['libdl.so']
25 ==> [2024-12-20-17:12:04.453089] Find complete: ['/lib64'] ['libdl.so']
26 ==> [2024-12-20-17:12:04.453164] Find (max depth = None): ['/lib'] ['libdl.so']
>> 27 ==> [2024-12-20-17:12:04.464993] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
28 ==> [2024-12-20-17:12:04.676573] Find complete: ['/lib'] ['libdl.so']
29 ==> [2024-12-20-17:12:04.676676] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
30 ==> [2024-12-20-17:12:04.676771] Find complete: ['/usr/lib64'] ['libdl.so']
31 ==> [2024-12-20-17:12:04.676844] Find (max depth = None): ['/usr/lib'] ['libdl.so']
>> 32 ==> [2024-12-20-17:12:04.688444] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
33 ==> [2024-12-20-17:12:04.895674] Find complete: ['/usr/lib'] ['libdl.so']
34 ==> [2024-12-20-17:12:04.895772] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
35 ==> [2024-12-20-17:12:04.895838] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
36 ==> [2024-12-20-17:12:04.895872] Find complete: ['/usr/local/lib64'] ['libdl.so']
37 ==> [2024-12-20-17:12:04.895932] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
38 ==> [2024-12-20-17:12:04.896102] Find complete: ['/usr/local/lib'] ['libdl.so']
39 ==> [2024-12-20-17:12:04.897098] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so
', 'libmkl_core.so']
40 ==> [2024-12-20-17:12:04.897321] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl
_core.so']
41 ==> [2024-12-20-17:12:04.897583] Find (max depth = None): ['/lib64'] ['libpthread.so']
42 ==> [2024-12-20-17:12:04.897681] Find complete: ['/lib64'] ['libpthread.so']
43 ==> [2024-12-20-17:12:04.897755] Find (max depth = None): ['/lib'] ['libpthread.so']
>> 44 ==> [2024-12-20-17:12:04.909601] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
45 ==> [2024-12-20-17:12:05.117597] Find complete: ['/lib'] ['libpthread.so']
46 ==> [2024-12-20-17:12:05.117696] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
47 ==> [2024-12-20-17:12:05.117792] Find complete: ['/usr/lib64'] ['libpthread.so']
48 ==> [2024-12-20-17:12:05.117867] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
>> 49 ==> [2024-12-20-17:12:05.129052] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
50 ==> [2024-12-20-17:12:05.336329] Find complete: ['/usr/lib'] ['libpthread.so']
51 ==> [2024-12-20-17:12:05.336430] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
52 ==> [2024-12-20-17:12:05.336498] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
53 ==> [2024-12-20-17:12:05.336534] Find complete: ['/usr/local/lib64'] ['libpthread.so']
54 ==> [2024-12-20-17:12:05.336597] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
55 ==> [2024-12-20-17:12:05.336764] Find complete: ['/usr/local/lib'] ['libpthread.so']
56 ==> [2024-12-20-17:12:05.336838] Find (max depth = None): ['/lib64'] ['libm.so']
57 ==> [2024-12-20-17:12:05.336916] Find complete: ['/lib64'] ['libm.so']
58 ==> [2024-12-20-17:12:05.336984] Find (max depth = None): ['/lib'] ['libm.so']
>> 59 ==> [2024-12-20-17:12:05.348765] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
60 ==> [2024-12-20-17:12:05.556511] Find complete: ['/lib'] ['libm.so']
61 ==> [2024-12-20-17:12:05.556617] Find (max depth = None): ['/lib64'] ['libdl.so']
62 ==> [2024-12-20-17:12:05.556710] Find complete: ['/lib64'] ['libdl.so']
63 ==> [2024-12-20-17:12:05.556783] Find (max depth = None): ['/lib'] ['libdl.so']
>> 64 ==> [2024-12-20-17:12:05.568366] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
65 ==> [2024-12-20-17:12:05.778284] Find complete: ['/lib'] ['libdl.so']
66 ==> [2024-12-20-17:12:05.778382] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
67 ==> [2024-12-20-17:12:05.778476] Find complete: ['/usr/lib64'] ['libdl.so']
68 ==> [2024-12-20-17:12:05.778551] Find (max depth = None): ['/usr/lib'] ['libdl.so']
>> 69 ==> [2024-12-20-17:12:05.789805] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
70 ==> [2024-12-20-17:12:05.996405] Find complete: ['/usr/lib'] ['libdl.so']
71 ==> [2024-12-20-17:12:05.996508] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
72 ==> [2024-12-20-17:12:05.996577] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
73 ==> [2024-12-20-17:12:05.996611] Find complete: ['/usr/local/lib64'] ['libdl.so']
74 ==> [2024-12-20-17:12:05.996676] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
75 ==> [2024-12-20-17:12:05.996846] Find complete: ['/usr/local/lib'] ['libdl.so']
76 ==> [2024-12-20-17:12:06.005744] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so
', 'libmkl_core.so']
77 ==> [2024-12-20-17:12:06.005972] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl
_core.so']
78 ==> [2024-12-20-17:12:06.006232] Find (max depth = None): ['/lib64'] ['libpthread.so']
79 ==> [2024-12-20-17:12:06.006332] Find complete: ['/lib64'] ['libpthread.so']
80 ==> [2024-12-20-17:12:06.006405] Find (max depth = None): ['/lib'] ['libpthread.so']
>> 81 ==> [2024-12-20-17:12:06.018110] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
82 ==> [2024-12-20-17:12:06.227814] Find complete: ['/lib'] ['libpthread.so']
83 ==> [2024-12-20-17:12:06.227916] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
84 ==> [2024-12-20-17:12:06.228015] Find complete: ['/usr/lib64'] ['libpthread.so']
85 ==> [2024-12-20-17:12:06.228089] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
>> 86 ==> [2024-12-20-17:12:06.239370] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
87 ==> [2024-12-20-17:12:06.444660] Find complete: ['/usr/lib'] ['libpthread.so']
88 ==> [2024-12-20-17:12:06.444764] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
89 ==> [2024-12-20-17:12:06.444836] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
90 ==> [2024-12-20-17:12:06.444870] Find complete: ['/usr/local/lib64'] ['libpthread.so']
91 ==> [2024-12-20-17:12:06.444933] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
92 ==> [2024-12-20-17:12:06.445108] Find complete: ['/usr/local/lib'] ['libpthread.so']
93 ==> [2024-12-20-17:12:06.445185] Find (max depth = None): ['/lib64'] ['libm.so']
94 ==> [2024-12-20-17:12:06.445272] Find complete: ['/lib64'] ['libm.so']
95 ==> [2024-12-20-17:12:06.445343] Find (max depth = None): ['/lib'] ['libm.so']
>> 96 ==> [2024-12-20-17:12:06.456935] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
97 ==> [2024-12-20-17:12:06.665707] Find complete: ['/lib'] ['libm.so']
98 ==> [2024-12-20-17:12:06.665813] Find (max depth = None): ['/lib64'] ['libdl.so']
99 ==> [2024-12-20-17:12:06.665908] Find complete: ['/lib64'] ['libdl.so']
100 ==> [2024-12-20-17:12:06.665982] Find (max depth = None): ['/lib'] ['libdl.so']
>> 101 ==> [2024-12-20-17:12:06.677487] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
102 ==> [2024-12-20-17:12:06.885857] Find complete: ['/lib'] ['libdl.so']
103 ==> [2024-12-20-17:12:06.885959] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
104 ==> [2024-12-20-17:12:06.886054] Find complete: ['/usr/lib64'] ['libdl.so']
105 ==> [2024-12-20-17:12:06.886129] Find (max depth = None): ['/usr/lib'] ['libdl.so']
>> 106 ==> [2024-12-20-17:12:06.897508] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
107 ==> [2024-12-20-17:12:07.102447] Find complete: ['/usr/lib'] ['libdl.so']
108 ==> [2024-12-20-17:12:07.102546] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
109 ==> [2024-12-20-17:12:07.102612] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
110 ==> [2024-12-20-17:12:07.102650] Find complete: ['/usr/local/lib64'] ['libdl.so']
111 ==> [2024-12-20-17:12:07.102711] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
112 ==> [2024-12-20-17:12:07.102877] Find complete: ['/usr/local/lib'] ['libdl.so']
113 ==> [2024-12-20-17:12:07.103702] Find (max depth = None): ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so
', 'libmkl_core.so']
114 ==> [2024-12-20-17:12:07.103919] Find complete: ['/opt/intel/oneapi/mkl/2023.2.0/lib/intel64'] ['libmkl_intel_lp64.so', 'libmkl_sequential.so', 'libmkl
_core.so']
115 ==> [2024-12-20-17:12:07.104179] Find (max depth = None): ['/lib64'] ['libpthread.so']
116 ==> [2024-12-20-17:12:07.104276] Find complete: ['/lib64'] ['libpthread.so']
117 ==> [2024-12-20-17:12:07.104348] Find (max depth = None): ['/lib'] ['libpthread.so']
>> 118 ==> [2024-12-20-17:12:07.115812] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
119 ==> [2024-12-20-17:12:07.323517] Find complete: ['/lib'] ['libpthread.so']
120 ==> [2024-12-20-17:12:07.323620] Find (max depth = None): ['/usr/lib64'] ['libpthread.so']
121 ==> [2024-12-20-17:12:07.323721] Find complete: ['/usr/lib64'] ['libpthread.so']
122 ==> [2024-12-20-17:12:07.323797] Find (max depth = None): ['/usr/lib'] ['libpthread.so']
>> 123 ==> [2024-12-20-17:12:07.334910] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
124 ==> [2024-12-20-17:12:07.539997] Find complete: ['/usr/lib'] ['libpthread.so']
125 ==> [2024-12-20-17:12:07.540103] Find (max depth = None): ['/usr/local/lib64'] ['libpthread.so']
126 ==> [2024-12-20-17:12:07.540173] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
127 ==> [2024-12-20-17:12:07.540205] Find complete: ['/usr/local/lib64'] ['libpthread.so']
128 ==> [2024-12-20-17:12:07.540267] Find (max depth = None): ['/usr/local/lib'] ['libpthread.so']
129 ==> [2024-12-20-17:12:07.540433] Find complete: ['/usr/local/lib'] ['libpthread.so']
130 ==> [2024-12-20-17:12:07.540508] Find (max depth = None): ['/lib64'] ['libm.so']
131 ==> [2024-12-20-17:12:07.540587] Find complete: ['/lib64'] ['libm.so']
132 ==> [2024-12-20-17:12:07.540656] Find (max depth = None): ['/lib'] ['libm.so']
>> 133 ==> [2024-12-20-17:12:07.552092] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
134 ==> [2024-12-20-17:12:07.761054] Find complete: ['/lib'] ['libm.so']
135 ==> [2024-12-20-17:12:07.761198] Find (max depth = None): ['/lib64'] ['libdl.so']
136 ==> [2024-12-20-17:12:07.761328] Find complete: ['/lib64'] ['libdl.so']
137 ==> [2024-12-20-17:12:07.761429] Find (max depth = None): ['/lib'] ['libdl.so']
>> 138 ==> [2024-12-20-17:12:07.773091] find must skip /lib/ssl/private: EACCES [Errno 13] Permission denied: '/lib/ssl/private'
139 ==> [2024-12-20-17:12:07.982340] Find complete: ['/lib'] ['libdl.so']
140 ==> [2024-12-20-17:12:07.982465] Find (max depth = None): ['/usr/lib64'] ['libdl.so']
141 ==> [2024-12-20-17:12:07.982596] Find complete: ['/usr/lib64'] ['libdl.so']
142 ==> [2024-12-20-17:12:07.982695] Find (max depth = None): ['/usr/lib'] ['libdl.so']
>> 143 ==> [2024-12-20-17:12:07.993899] find must skip /usr/lib/ssl/private: EACCES [Errno 13] Permission denied: '/usr/lib/ssl/private'
144 ==> [2024-12-20-17:12:08.199313] Find complete: ['/usr/lib'] ['libdl.so']
145 ==> [2024-12-20-17:12:08.199438] Find (max depth = None): ['/usr/local/lib64'] ['libdl.so']
146 ==> [2024-12-20-17:12:08.199530] find must skip /usr/local/lib64: ENOENT [Errno 2] No such file or directory: '/usr/local/lib64'
147 ==> [2024-12-20-17:12:08.199583] Find complete: ['/usr/local/lib64'] ['libdl.so']
148 ==> [2024-12-20-17:12:08.199679] Find (max depth = None): ['/usr/local/lib'] ['libdl.so']
149 ==> [2024-12-20-17:12:08.199892] Find complete: ['/usr/local/lib'] ['libdl.so']
...
168 Source dir: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fp
cbf/spack-src
169 Build dir: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpc
bf/spack-src/build
170 Build type: native build
171 Project name: scipy
172 Project version: 1.14.1
173
>> 174 ../meson.build:1:0: ERROR: None of values ['c17'] are supported by the C compiler. Possible values for option "C_std" are ['none', 'c89', 'c99', 'c11',
'gnu89', 'gnu99', 'gnu11']
175
176 A full log can be found at /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk
5hopwyybnoa52fpcbf/spack-src/build/meson-logs/meson-log.txt
177 error: subprocess-exited-with-error
178
179 × Preparing metadata (pyproject.toml) did not run successfully.
180 │ exit code: 1
181 ╰─> See above for output.
182
183 note: This error originates from a subprocess, and is likely not a problem with pip.
184 full command: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/__spack_path_placeholder__/__s
pack_path_placeholder__/__spack_path_placeholder__/__spack_path_p/intel/2021.10.0/python-venv-1.0-bksheuy/bin/python3 /home/ubuntu/spack-stack/manual-t
esting/spst-cylc-intel-issue/envs/ue-intel-2021.10.0-buildcache/install/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder_
_/__spack_path_p/intel/2021.10.0/py-pip-23.1.2-gpmwnt4/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py prepare_meta
data_for_build_wheel /tmp/tmpdjbwkzld
185 cwd: /home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spa
ck-src
186 Preparing metadata (pyproject.toml): finished with status 'error'
>> 187 error: metadata-generation-failed
188
189 × Encountered error while generating package metadata.
190 ╰─> See above for output.
191
192 note: This is an issue with the package mentioned above, not pip.
193 hint: See above for details.
See build log for details:
/home/ubuntu/spack-stack/manual-testing/spst-cylc-intel-issue/cache/build_stage/spack-stage-py-scipy-1.14.1-dlaepp56w2bekk5hopwyybnoa52fpcbf/spack-build-out.txt
* **Spack:** 0.23.0 (d0ba7f700c5b4386df3f2a0500b9012c0e7818d7)
* **Python:** 3.10.12
* **Platform:** linux-ubuntu22.04-zen2
Steps to reproduce the issue
Error message
Information on your system
Additional information
spack-build-01-install-out.txt
spack-build-env-mods.txt
spack-build-env.txt
spack-build-out.txt
@adamjstewart @rgommers
My suggestion is to simply create a conflict for the classic Intel compilers (
%intel) with[email protected]:. Older versions ofpy-scipy, up until and including1.13.1, build with the classic Intel compilers, and the classic compilers are deprecated and will go away.General information
spack debug reportand reported the version of Spack/Python/Platformspack maintainers <name-of-the-package>and @mentioned any maintainers