[email protected] %oneapi, %clang@13, %clang@14: test/ninja_test_util.c:34: multiple definition of `a' #32112
Description
Steps to reproduce the issue
Reproduced here using:
spack@develop(08e75f7a3e02effromFri Aug 12 00:20:47 2022 -0700)ecpe4s/ubuntu20.04-runner-x86_64-oneapi:2022-07-01%[email protected]
Also an issue with:
Concrete spec: pruners-ninja.spec.json.txt
Concretization:
==> Concretized pruners-ninja
- wylz3ag [email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] tuc6vdd ^[email protected]%[email protected] patches=35c4492,7793209,a49dd5b arch=linux-ubuntu20.04-x86_64
[+] agucw5d ^[email protected]%[email protected]+sigsegv patches=9dc5fbd,bfdffa7 arch=linux-ubuntu20.04-x86_64
[+] uli7ace ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] sohfg2f ^[email protected]%[email protected] libs=shared,static arch=linux-ubuntu20.04-x86_64
[+] q56bku4 ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] g75tej4 ^[email protected]%[email protected]+cpanm+shared+threads arch=linux-ubuntu20.04-x86_64
[+] ahtnphg ^[email protected]%[email protected]+cxx~docs+stl patches=b231fcc arch=linux-ubuntu20.04-x86_64
[+] 44yzgyw ^[email protected]%[email protected]~debug~pic+shared arch=linux-ubuntu20.04-x86_64
[+] mnowgf4 ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] cd2lgld ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] gvjgisz ^[email protected]%[email protected]~symlinks+termlib abi=none arch=linux-ubuntu20.04-x86_64
[+] euvcz47 ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] 5jz7ihy ^[email protected]%[email protected]+optimize+pic+shared patches=0d38234 arch=linux-ubuntu20.04-x86_64
[+] zl3oyek ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] 5n46ly5 ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] cflgwhp ^[email protected]%[email protected]~argobots~cuda+fortran+hwloc+hydra+libxml2+pci~rocm+romio~slurm~two_level_namespace~vci~verbs~wrapperrpath datatype-engine=auto device=ch4 netmod=ofi patches=b4c706e pmi=pmi arch=linux-ubuntu20.04-x86_64
[+] rltl5ed ^[email protected]%[email protected] patches=440b954 arch=linux-ubuntu20.04-x86_64
[+] 7drxrmz ^[email protected]%[email protected]~cairo~cuda~gl~libudev+libxml2~netloc~nvml~oneapi-level-zero~opencl+pci~rocm+shared arch=linux-ubuntu20.04-x86_64
[+] ky5qiaz ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] iwdrk44 ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] go3fobe ^[email protected]%[email protected]~python arch=linux-ubuntu20.04-x86_64
[+] ppl5hwa ^[email protected]%[email protected]+pic libs=shared,static arch=linux-ubuntu20.04-x86_64
[+] mpntixm ^[email protected]%[email protected]~debug~kdreg fabrics=rxm,sockets,tcp,udp arch=linux-ubuntu20.04-x86_64
[+] dcm6vaw ^[email protected]%[email protected]~cuda~rocm arch=linux-ubuntu20.04-x86_64
[+] cg23twc ^[email protected]%[email protected]+bz2+ctypes+dbm~debug+ensurepip+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib patches=0d98e93,4c24573,f2fd060 arch=linux-ubuntu20.04-x86_64
[+] ijry5ro ^[email protected]%[email protected]+libbsd arch=linux-ubuntu20.04-x86_64
[+] flwxuwx ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] uxmtkav ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] sf4jy5o ^[email protected]%[email protected]+bzip2+curses+git~libunistring+libxml2+tar+xz arch=linux-ubuntu20.04-x86_64
[+] tjngmek ^[email protected]%[email protected] zip=pigz arch=linux-ubuntu20.04-x86_64
[+] fisjzhz ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] rg3ig4l ^[email protected]%[email protected]+programs compression=none libs=shared,static arch=linux-ubuntu20.04-x86_64
[+] maq3kzw ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
[+] 4455rwb ^[email protected]%[email protected]~docs~shared certs=mozilla patches=3fdcf2d arch=linux-ubuntu20.04-x86_64
[+] tlqunsr ^ca-certificates-mozilla@2022-07-19%[email protected] arch=linux-ubuntu20.04-x86_64
[+] 7edvlef ^[email protected]%[email protected]+column_metadata+dynamic_extensions+fts~functions+rtree arch=linux-ubuntu20.04-x86_64
[+] k3c4qk3 ^[email protected]%[email protected] arch=linux-ubuntu20.04-x86_64
Install error:
==> Installing pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf
==> No binary for pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/53/53df5c019054b60c68e63d3e249127f1d5f267a70539c8809fb42a8ddbfcb29b.tar.gz
==> No patches needed for pruners-ninja
==> pruners-ninja: Executing phase: 'autoreconf'
==> pruners-ninja: Executing phase: 'configure'
==> pruners-ninja: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'
6 errors found in build log:
214 /bin/bash ../libtool --tag=CC --mode=link /spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2022.1.0/mpich-4.0.2-cflgwhpy55pyz2ii3ayp54rxbst3pxwj/bin/
mpicc -g -O2 -o ninja_test_matching_race ninja_test_matching_race.o ninja_test_util.o -lmpi
215 libtool: link: /spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2022.1.0/mpich-4.0.2-cflgwhpy55pyz2ii3ayp54rxbst3pxwj/bin/mpicc -g -O2 -o ninja_test_pin
gpong ninja_test_pingpong.o ninja_test_util.o -lmpi
216 mv -f .deps/ninja_test_units.Tpo .deps/ninja_test_units.Po
217 /bin/bash ../libtool --tag=CC --mode=link /spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2022.1.0/mpich-4.0.2-cflgwhpy55pyz2ii3ayp54rxbst3pxwj/bin/
mpicc -g -O2 -o ninja_test_units ninja_test_units.o ninja_test_util.o -lmpi
218 libtool: link: /spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2022.1.0/mpich-4.0.2-cflgwhpy55pyz2ii3ayp54rxbst3pxwj/bin/mpicc -g -O2 -o ninja_test_hyp
re_parasails ninja_test_hypre_parasails.o ninja_test_util.o -lmpi
219 libtool: link: /spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2022.1.0/mpich-4.0.2-cflgwhpy55pyz2ii3ayp54rxbst3pxwj/bin/mpicc -g -O2 -o ninja_test_mat
ching_race ninja_test_matching_race.o ninja_test_util.o -lmpi
>> 220 /usr/bin/ld: ninja_test_util.o:/tmp/root/spack-stage/spack-stage-pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf/spack-src/test/ninja_test_util.c:3
4: multiple definition of `a'; ninja_test_hypre_parasails.o:/tmp/root/spack-stage/spack-stage-pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf/spack
-src/test/ninja_test_hypre_parasails.c:309: first defined here
221 libtool: link: /spack/opt/spack/linux-ubuntu20.04-x86_64/oneapi-2022.1.0/mpich-4.0.2-cflgwhpy55pyz2ii3ayp54rxbst3pxwj/bin/mpicc -g -O2 -o ninja_test_uni
ts ninja_test_units.o ninja_test_util.o -lmpi
>> 222 clang: error: linker command failed with exit code 1 (use -v to see invocation)
>> 223 make[3]: *** [Makefile:425: ninja_test_hypre_parasails] Error 1
224 make[3]: *** Waiting for unfinished jobs....
225 make[3]: Leaving directory '/tmp/root/spack-stage/spack-stage-pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf/spack-src/test'
>> 226 make[2]: *** [Makefile:485: all-recursive] Error 1
227 make[2]: Leaving directory '/tmp/root/spack-stage/spack-stage-pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf/spack-src/test'
>> 228 make[1]: *** [Makefile:422: all-recursive] Error 1
229 make[1]: Leaving directory '/tmp/root/spack-stage/spack-stage-pruners-ninja-1.0.1-wylz3agaymjpkcqqqek5pqszdd6ut7xf/spack-src'
>> 230 make: *** [Makefile:354: all] Error 2
Error message
Error message
... see above
Information on your system
- Spack: 0.19.0.dev0 (d735c49b3217598e3a4432f6a6337916f57f730d)
- Python: 3.8.10
- Platform: linux-ubuntu20.04-cascadelake
- Concretizer: clingo
Additional information
spack-build-out.txt
spack-build-env.txt
General information
- I have run
spack debug reportand reported the version of Spack/Python/Platform - I have run
spack maintainers <name-of-the-package>and @mentioned any maintainers - I have uploaded the build log and environment files
- I have searched the issues of this repo and believe this is not a duplicate