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chore(main): release 9.14.0#3835

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johanneskoester merged 1 commit intomainfrom
release-please--branches--main
Nov 27, 2025
Merged

chore(main): release 9.14.0#3835
johanneskoester merged 1 commit intomainfrom
release-please--branches--main

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@snakemake-bot snakemake-bot commented Nov 8, 2025

🤖 I have created a release beep boop

9.14.0 (2025-11-27)

Features

Bug Fixes

  • Add support for pathlib in notebook field (#3811) (7b2180a)
  • Addressed race condition in workdir_handler.py (#3844) (8dbfcfb)
  • cleanup update-marked output files of failed jobs if there was no backup to restore them (#3843) (41f1ce8)
  • correct Windows callable path handling (#3832) (5caad70)
  • expand env vars on resources (#3823) (fcfa1bc)
  • fix backup for output marked by update (#3839) (09c64b7)
  • Minor fixes/additions to logging module. (#3802) (3b3986d)
  • mount local storage prefix into containers (#3840) (f1e8b62)
  • properly format input/output files in case of missing rule to produce them (#3849) (69d5d24)
  • Unpack AnnotatedString in _apply_wildcards (#3798) (7886508)

Performance Improvements

  • retrieve storage inputs immediately before scheduling jobs instead of before running the entire workflow (#3850) (4ac6cda)

This PR was generated with Release Please. See documentation.

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coderabbitai Bot commented Nov 8, 2025

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@snakemake-bot snakemake-bot force-pushed the release-please--branches--main branch 2 times, most recently from 0b82a52 to 0867997 Compare November 19, 2025 09:00
@snakemake-bot snakemake-bot force-pushed the release-please--branches--main branch 8 times, most recently from 74d9130 to ff29c4d Compare November 27, 2025 16:04
@snakemake-bot snakemake-bot force-pushed the release-please--branches--main branch from ff29c4d to 4042d13 Compare November 27, 2025 17:01
@johanneskoester johanneskoester merged commit 12ce6c6 into main Nov 27, 2025
57 of 58 checks passed
@johanneskoester johanneskoester deleted the release-please--branches--main branch November 27, 2025 17:02
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🤖 Created releases:

🌻

kjohnsen pushed a commit to kjohnsen/snakemake that referenced this pull request Dec 15, 2025
🤖 I have created a release *beep* *boop*
---


##
[9.14.0](snakemake/snakemake@v9.13.7...v9.14.0)
(2025-11-27)


### Features

* Support Hy in script directive
([snakemake#3824](snakemake#3824))
([2329c9e](snakemake@2329c9e))


### Bug Fixes

* Add support for pathlib in `notebook` field
([snakemake#3811](snakemake#3811))
([7b2180a](snakemake@7b2180a))
* Addressed race condition in workdir_handler.py
([snakemake#3844](snakemake#3844))
([8dbfcfb](snakemake@8dbfcfb))
* cleanup update-marked output files of failed jobs if there was no
backup to restore them
([snakemake#3843](snakemake#3843))
([41f1ce8](snakemake@41f1ce8))
* correct Windows callable path handling
([snakemake#3832](snakemake#3832))
([5caad70](snakemake@5caad70))
* expand env vars on resources
([snakemake#3823](snakemake#3823))
([fcfa1bc](snakemake@fcfa1bc))
* fix backup for output marked by `update`
([snakemake#3839](snakemake#3839))
([09c64b7](snakemake@09c64b7))
* Minor fixes/additions to logging module.
([snakemake#3802](snakemake#3802))
([3b3986d](snakemake@3b3986d))
* mount local storage prefix into containers
([snakemake#3840](snakemake#3840))
([f1e8b62](snakemake@f1e8b62))
* properly format input/output files in case of missing rule to produce
them ([snakemake#3849](snakemake#3849))
([69d5d24](snakemake@69d5d24))
* Unpack AnnotatedString in _apply_wildcards
([snakemake#3798](snakemake#3798))
([7886508](snakemake@7886508))


### Performance Improvements

* retrieve storage inputs immediately before scheduling jobs instead of
before running the entire workflow
([snakemake#3850](snakemake#3850))
([4ac6cda](snakemake@4ac6cda))

---
This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).
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