Google life sciences executor down #2451
Description
Snakemake v7.32.3
Using the google life sciences executer seems to currently be broken. As of 9/16, my submissions to GLS result in the following error:
gls_snakemake_log.txt
stderr: |
--2023-09-18 22:09:53-- https://raw.githubusercontent.com/snakemake/snakemake/main/snakemake/executors/google_lifesciences_helper.py
Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.108.133, 185.199.109.133, ...
Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.
HTTP request sent, awaiting response... 404 Not Found
2023-09-18 22:09:53 ERROR 404: Not Found.
tar (child): /tmp/workdir.tar.gz: Cannot open: No such file or directory
tar (child): Error is not recoverable: exiting now
tar: Child returned status 2
tar: Error is not recoverable: exiting now
The URL is indeed missing, so I don't believe this is an issue with 7.32.3.
The full output of gcloud beta lifesciences operations describe is attached
I realize that GLS is going to unfortunately stop being supported by Google soon, but it would be useful to know if this is true for snakemake in the short term.
Thanks!