…rance (#3293)

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### QC
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* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **New Features**
- **Enhanced Results Display:** Results are now organized and sorted for
clearer, more intuitive presentation.
- **Improved Navigation:** Clicking the breadcrumb now takes you back to
the main menu, streamlining the navigation experience.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->

The snakemake tests use the decorator `@conda` to check whether the
`conda` executable is in the user `$PATH` and otherwise skips them.

However, some annotations are missing and hence failing instead of being
skipped without `conda`:

```
tests/tests.py::test_conda_create_envs_only
tests/tests.py::test_get_log_none
tests/tests.py::test_get_log_both
tests/tests.py::test_get_log_stderr
tests/tests.py::test_get_log_stdout
tests/tests.py::test_get_log_complex
tests/tests.py::test_issue1046
tests/tests.py::test_containerize
```

This patch adds the missing decorator to those tests.

### QC
<!-- Make sure that you can tick the boxes below. -->

* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **Tests**
- Expanded automated test coverage to verify environment setup
processes.
- Added validations for logging behavior across multiple scenarios,
ensuring robust handling of different output conditions.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->

…t_href, see docs) (#3224)

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### QC
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* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

## Release Notes

- **New Features**
- Enhanced reporting capabilities with new directives and methods for
generating comprehensive HTML reports.
- Introduced dynamic linking in reports and the ability to include file
labels and categories.
- Added new HTML report generation functionality with example workflows.
- New functionality to manage report hyperlinks, improving navigation
within reports.

- **Bug Fixes**
	- Improved error handling and user feedback during report generation.

- **Tests**
- Added new tests for report generation functionality to ensure
reliability.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

…testing (#3304)

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### QC
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* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

- **Chores**
- Enhanced our CI workflow by configuring a local object storage service
for improved testing reliability.

- **Tests**
- Updated storage settings to use local credentials for a more isolated
test environment.
- Added new tests to validate storage functionality across supported
platforms, with specific handling for Windows.
	- Expanded test coverage for storage-related features.

- **Documentation**
- Updated package version requirement for `sphinx` to address a
temporary bug.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

<!--Add a description of your PR here-->

### QC
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* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

- **New Features**
- Introduced interactive toggle switches that let users dynamically
filter and adjust result displays.
- Added a new `Toggle` component for selecting between values using
radio buttons.
- Enhanced result display management with the `ToggleViewManager` and
`ButtonViewManager` classes.
- Integrated new JavaScript components into the report's HTML template
for improved functionality.

- **Bug Fixes**
- Updated asset specifications for `tailwindcss` to ensure correct
versioning and URL retrieval.

- **Documentation**
- Enhanced reporting documentation with recommendations for using labels
and showcasing toggle switch functionality.

- **Refactor**
- Optimized the result view button behavior for a more intuitive and
consistent user experience.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

…mkdir) fails (#3309)

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### QC
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* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).

Before it could fail with certain storage plugins (e.g. fs), in
combination with local execution.

### QC
<!-- Make sure that you can tick the boxes below. -->

* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **New Features**
- Refined file storage behavior by excluding certain flagged files from
retention.
- Enhanced file waiting functionality with an additional option for
local file evaluation and clearer notifications when files are missing.
- Upgraded job processing by tracking special outputs and providing
improved error reporting for smoother operations.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->

…rds in order to avoid that files of the wrong format are erroneously returned by the cache. This will lead to some cache misses. But avoiding errors induced by the previous behavior of ignoring file extensions when seeking for cache records is more important. (#3314)

<!--Add a description of your PR here-->

### QC
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* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **New Features**
- Improved caching of job outputs by incorporating file extensions. This
update ensures that output files are more accurately identified and
retrieved from the cache, reducing potential mismatches.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->

🤖 I have created a release *beep* *boop*
---


##
[8.29.0](v8.28.0...v8.29.0)
(2025-02-27)


### Features

* provide mechanism to link between report items (snakemake.report_href,
see docs) ([#3224](#3224))
([a024e60](a024e60))
* toggles for binary labels in report
([#3296](#3296))
([7690998](7690998))


### Bug Fixes

* add missing [@conda](https://github.com/conda) annotations
([#3298](#3298))
([0b541cc](0b541cc))
* properly handle remote storage when waiting for pipes
([#3317](#3317))
([9f7e092](9f7e092))
* provide proper error messages if output file preparation (pipe, mkdir)
fails ([#3309](#3309))
([77ef176](77ef176))
* record file extension (e.g. .tsv) in between workflow cache records in
order to avoid that files of the wrong format are erroneously returned
by the cache. This will lead to some cache misses. But avoiding errors
induced by the previous behavior of ignoring file extensions when
seeking for cache records is more important.
([#3314](#3314))
([4912f00](4912f00))
* sort results lexicographically by labels in their order of appearance
([#3293](#3293))
([a19a0ac](a19a0ac))


### Documentation

* update best practices
([7270eb3](7270eb3))

---
This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>