Permalink
Comparing changes
Choose two branches to see what’s changed or to start a new pull request.
If you need to, you can also or
learn more about diff comparisons.
Open a pull request
Create a new pull request by comparing changes across two branches. If you need to, you can also .
Learn more about diff comparisons here.
...
- 12 commits
- 18 files changed
- 6 contributors
Commits on Jan 8, 2024
-
feat: add --sdm short opt for --deployment (#2551)
### Description The new `--software-deployment-method`/`--deployment-method`/`--deployment` is probably a heavily used option for most users, so I think it would benefit from a shorthand option as it is quite verbose. Seems `-m` is available and is kind of related. I've also updated the docs with some references to this shorthand version and replaced some longform usage with the short option, ensuring it is made clear what the shorthand option is an alias for. Happy to change this though. ### QC <!-- Make sure that you can tick the boxes below. --> * [ ] The PR contains a test case for the changes or the changes are already covered by an existing test case. * [x] The documentation (`docs/`) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).
-
chore: add plugins for ci testing to test environment (#2553)
### Description remove and add as regular dependency as in TODO ### QC <!-- Make sure that you can tick the boxes below. --> * [ ] The PR contains a test case for the changes or the changes are already covered by an existing test case. * [ ] The documentation (`docs/`) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).
-
### Description <!--Add a description of your PR here--> Detailed diff between <7 and 8, may be useful for issues such as #2552 and others. ### QC <!-- Make sure that you can tick the boxes below. --> * [ ] The PR contains a test case for the changes or the changes are already covered by an existing test case. * [ ] The documentation (`docs/`) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).
-
fix: single line f-string format error in py3.12 (#2588)
### Description fix #2586 for some cases do not considered in #2485 ### QC <!-- Make sure that you can tick the boxes below. --> * [x] The PR contains a test case for the changes or the changes are already covered by an existing test case. * [ ] The documentation (`docs/`) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).
-
test: Add test for issue #1256 and #2574 (#2583)
### Description Add test for issues #1256 and #2574. The test Snakefile has a syntax error on line 9. Some versions of Snakemake, including 8.0.1, incorrectly report the error on line 20. I'm only submitting the test case, not the fix. ### QC * [x] The PR contains a test case for the changes or the changes are already covered by an existing test case. * [x] The documentation (`docs/`) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake).
-
-
-
-
-
fix: correctly report lineno (#2584)
### Description fix: #2583, #1256 and #2574 ### QC maybe #2583 * [ ] The PR contains a test case for the changes or the changes are already covered by an existing test case. * [ ] The documentation (`docs/`) is updated to reflect the changes or this is not necessary (e.g. if the change does neither modify the language nor the behavior or functionalities of Snakemake). --------- Co-authored-by: Johannes Köster <[email protected]>
-
-
chore(main): release 8.1.0 (#2591)
🤖 I have created a release *beep* *boop* --- ## [8.1.0](v8.0.1...v8.1.0) (2024-01-08) ### Features * add --sdm short opt for --deployment ([#2551](#2551)) ([fd8b4b0](fd8b4b0)) ### Bug Fixes * add mamba to docker image ([eb0c884](eb0c884)) * correctly report lineno ([#2584](#2584)) ([967a0d7](967a0d7)) * move apptainer into separate env in docker image ([94e9e2c](94e9e2c)) * single line f-string format error in py3.12 ([#2588](#2588)) ([87c06c0](87c06c0)) ### Documentation * add note on google executor backends ([ff8683c](ff8683c)) * diff 7 and 8 ([#2561](#2561)) ([ba22e07](ba22e07)) --- This PR was generated with [Release Please](https://github.com/googleapis/release-please). See [documentation](https://github.com/googleapis/release-please#release-please). Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Loading
This comparison is taking too long to generate.
Unfortunately it looks like we can’t render this comparison for you right now. It might be too big, or there might be something weird with your repository.
You can try running this command locally to see the comparison on your machine:
git diff v8.0.1...v8.1.0