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Add 3.11 and 3.12 to update-requirements-txt and re-run
1 parent 9b282eb commit 7e3adfe

8 files changed

Lines changed: 108 additions & 66 deletions

‎python-spec/requirements-py3.10.txt‎

Lines changed: 16 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -1,17 +1,19 @@
1-
anndata==0.9.2
2-
attrs==23.1.0
3-
h5py==3.9.0
4-
llvmlite==0.41.0
1+
anndata==0.10.5.post1
2+
array_api_compat==1.4.1
3+
attrs==23.2.0
4+
exceptiongroup==1.2.0
5+
h5py==3.10.0
6+
llvmlite==0.42.0
57
natsort==8.4.0
6-
numba==0.58.0
7-
numpy==1.25.2
8-
packaging==23.1
9-
pandas==2.1.1
10-
pyarrow==13.0.0
11-
pyarrow_hotfix==0.6.0
8+
numba==0.59.0
9+
numpy==1.26.4
10+
packaging==23.2
11+
pandas==2.2.0
12+
pyarrow==15.0.0
13+
pyarrow-hotfix==0.6
1214
python-dateutil==2.8.2
13-
pytz==2023.3.post1
14-
scipy==1.11.3
15+
pytz==2024.1
16+
scipy==1.12.0
1517
six==1.16.0
16-
typing_extensions==4.8.0
17-
tzdata==2023.3
18+
typing_extensions==4.9.0
19+
tzdata==2024.1

‎python-spec/requirements-py3.11.txt‎

Lines changed: 18 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,18 @@
1+
anndata==0.10.5.post1
2+
array_api_compat==1.4.1
3+
attrs==23.2.0
4+
h5py==3.10.0
5+
llvmlite==0.42.0
6+
natsort==8.4.0
7+
numba==0.59.0
8+
numpy==1.26.4
9+
packaging==23.2
10+
pandas==2.2.0
11+
pyarrow==15.0.0
12+
pyarrow-hotfix==0.6
13+
python-dateutil==2.8.2
14+
pytz==2024.1
15+
scipy==1.12.0
16+
six==1.16.0
17+
typing_extensions==4.9.0
18+
tzdata==2024.1

‎python-spec/requirements-py3.12.txt‎

Lines changed: 20 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,20 @@
1+
anndata==0.10.5.post1
2+
array_api_compat==1.4.1
3+
attrs==23.2.0
4+
h5py==3.10.0
5+
llvmlite==0.42.0
6+
natsort==8.4.0
7+
numba==0.59.0
8+
numpy==1.26.4
9+
packaging==23.2
10+
pandas==2.2.0
11+
pyarrow==15.0.0
12+
pyarrow-hotfix==0.6
13+
python-dateutil==2.8.2
14+
pytz==2024.1
15+
scipy==1.12.0
16+
setuptools==69.0.3
17+
six==1.16.0
18+
typing_extensions==4.9.0
19+
tzdata==2024.1
20+
wheel==0.42.0

‎python-spec/requirements-py3.7.txt‎

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -1,17 +1,17 @@
11
anndata==0.8.0
2-
attrs==23.1.0
2+
attrs==23.2.0
33
h5py==3.8.0
44
importlib-metadata==6.7.0
55
llvmlite==0.39.1
66
natsort==8.4.0
77
numba==0.56.4
88
numpy==1.21.6
9-
packaging==23.1
9+
packaging==23.2
1010
pandas==1.3.5
1111
pyarrow==12.0.1
12-
pyarrow_hotfix==0.6.0
12+
pyarrow-hotfix==0.6
1313
python-dateutil==2.8.2
14-
pytz==2023.3.post1
14+
pytz==2024.1
1515
scipy==1.7.3
1616
six==1.16.0
1717
typing_extensions==4.7.1

‎python-spec/requirements-py3.8-lint.txt‎

Lines changed: 22 additions & 22 deletions
Original file line numberDiff line numberDiff line change
@@ -1,36 +1,36 @@
11
anndata==0.9.2
2-
attrs==23.1.0
3-
black==23.9.1
2+
attrs==23.2.0
3+
black==24.2.0
44
cfgv==3.4.0
55
click==8.1.7
6-
distlib==0.3.7
7-
filelock==3.12.4
8-
h5py==3.9.0
9-
identify==2.5.29
10-
importlib-metadata==6.8.0
11-
isort==5.12.0
12-
llvmlite==0.41.0
13-
mypy==1.5.1
6+
distlib==0.3.8
7+
filelock==3.13.1
8+
h5py==3.10.0
9+
identify==2.5.34
10+
importlib-metadata==7.0.1
11+
isort==5.13.2
12+
llvmlite==0.41.1
13+
mypy==1.8.0
1414
mypy-extensions==1.0.0
1515
natsort==8.4.0
1616
nodeenv==1.8.0
17-
numba==0.58.0
17+
numba==0.58.1
1818
numpy==1.24.4
19-
packaging==23.1
19+
packaging==23.2
2020
pandas==2.0.3
21-
pathspec==0.11.2
22-
platformdirs==3.10.0
23-
pre-commit==3.4.0
24-
pyarrow==13.0.0
25-
pyarrow_hotfix==0.6.0
21+
pathspec==0.12.1
22+
platformdirs==4.2.0
23+
pre-commit==3.5.0
24+
pyarrow==15.0.0
25+
pyarrow-hotfix==0.6
2626
python-dateutil==2.8.2
27-
pytz==2023.3.post1
27+
pytz==2024.1
2828
PyYAML==6.0.1
29-
ruff==0.0.291
29+
ruff==0.2.1
3030
scipy==1.10.1
3131
six==1.16.0
3232
tomli==2.0.1
33-
typing_extensions==4.8.0
34-
tzdata==2023.3
35-
virtualenv==20.24.5
33+
typing_extensions==4.9.0
34+
tzdata==2024.1
35+
virtualenv==20.25.0
3636
zipp==3.17.0

‎python-spec/requirements-py3.8.txt‎

Lines changed: 11 additions & 11 deletions
Original file line numberDiff line numberDiff line change
@@ -1,19 +1,19 @@
11
anndata==0.9.2
2-
attrs==23.1.0
3-
h5py==3.9.0
4-
importlib-metadata==6.8.0
5-
llvmlite==0.41.0
2+
attrs==23.2.0
3+
h5py==3.10.0
4+
importlib-metadata==7.0.1
5+
llvmlite==0.41.1
66
natsort==8.4.0
7-
numba==0.58.0
7+
numba==0.58.1
88
numpy==1.24.4
9-
packaging==23.1
9+
packaging==23.2
1010
pandas==2.0.3
11-
pyarrow==13.0.0
12-
pyarrow_hotfix==0.6.0
11+
pyarrow==15.0.0
12+
pyarrow-hotfix==0.6
1313
python-dateutil==2.8.2
14-
pytz==2023.3.post1
14+
pytz==2024.1
1515
scipy==1.10.1
1616
six==1.16.0
17-
typing_extensions==4.8.0
18-
tzdata==2023.3
17+
typing_extensions==4.9.0
18+
tzdata==2024.1
1919
zipp==3.17.0

‎python-spec/requirements-py3.9.txt‎

Lines changed: 16 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -1,21 +1,23 @@
1-
anndata==0.9.2
2-
attrs==23.1.0
1+
anndata==0.10.5.post1
2+
array_api_compat==1.4.1
3+
attrs==23.2.0
34
docutils==0.16
4-
h5py==3.9.0
5+
exceptiongroup==1.2.0
6+
h5py==3.10.0
57
jmespath==1.0.1
6-
llvmlite==0.41.0
8+
llvmlite==0.42.0
79
natsort==8.4.0
8-
numba==0.58.0
9-
numpy==1.25.2
10-
packaging==23.1
11-
pandas==2.1.1
12-
pyarrow==13.0.0
13-
pyarrow_hotfix==0.6.0
10+
numba==0.59.0
11+
numpy==1.26.4
12+
packaging==23.2
13+
pandas==2.2.0
14+
pyarrow==15.0.0
15+
pyarrow-hotfix==0.6
1416
python-dateutil==2.8.2
15-
pytz==2023.3.post1
17+
pytz==2024.1
1618
rsa==4.7.2
1719
s3transfer==0.6.0
18-
scipy==1.11.3
20+
scipy==1.12.0
1921
six==1.16.0
20-
typing_extensions==4.8.0
21-
tzdata==2023.3
22+
typing_extensions==4.9.0
23+
tzdata==2024.1

‎python-spec/update-requirements-txt‎

Lines changed: 1 addition & 1 deletion
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@@ -12,7 +12,7 @@ trap "trash $TEMPDIR" EXIT
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# The version of Python we want to run lints under.
1313
LINTVER=3.8
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15-
for PYVER in 3.7 3.8 3.9 3.10; do
15+
for PYVER in 3.7 3.8 3.9 3.10 3.11 3.12; do
1616
CONDIR="$TEMPDIR/py-$PYVER"
1717
conda create -y -p "$CONDIR" "python=$PYVER"
1818
(

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