`gcc`, `gfortran`: Update to 13.2.0; remove `debian-buster-gcc_spkg` from CI by mkoeppe · Pull Request #38008 · sagemath/sage

mkoeppe · 2024-05-16T00:41:48Z

Fixes gfortran doesn't build on latest OS X + Xcode + Homebrew #38006 @jhpalmieri
gcc does not build on debian-buster (which we supported via -gcc_spkg because it is LTS until 2024-06), so we drop this platform now; see Meta-ticket: Remove support for outdated distros #32074.

📝 Checklist

The title is concise and informative.
The description explains in detail what this PR is about.
I have linked a relevant issue or discussion.
I have created tests covering the changes.
I have updated the documentation and checked the documentation preview.

⌛ Dependencies

Depends on sage-bootstrap: update cryptographic hashes #37726 (merged here to resolve merge conflict)

…nsistency

…-core/blob/50d9d78a4a09b42807b0a8f74f1f2f8933051a7b/Formula/g/[email protected]

…s://salsa.debian.org/toolchain-team/gcc/-/blob/gcc-13-debian/debian/patches/gcc-multilib-multiarch.diff\?ref_type\=heads

… level

….debian.org/toolchain-team/gcc/-/blob/gcc-13-debian/debian/patches/gcc-multiarch.diff\?ref_type\=heads

mkoeppe · 2024-05-16T01:45:27Z

Testing (ci-37203-37834-37919-37931-38008-38009) at https://github.com/mkoeppe/sage/actions/runs/9105145243 (Linux), https://github.com/mkoeppe/sage/actions/runs/9105145246 (macOS)

github-actions · 2024-05-16T02:11:51Z

Documentation preview for this PR (built with commit 4187f5c; changes) is ready! 🎉
This preview will update shortly after each push to this PR.

mkoeppe · 2024-05-16T03:51:19Z

gcc build fails on standard-pre / linux (debian-buster-gcc_spkg, standard)

jhpalmieri · 2024-05-16T22:06:07Z

I'm confused: which parts of this PR remove debian-buster-gcc_spkg from the CI?

mkoeppe · 2024-05-17T01:07:49Z

... the part that I forgot to commit ...

mkoeppe · 2024-05-17T01:11:03Z

Here it is.

jhpalmieri · 2024-05-17T17:39:23Z

On an Apple Silicon machine, latest OS and Xcode and homebrew, gfortran builds and works fine. Using ./configure --with-system-gcc=no, several packages fail to build: lcalc, givaro, ppl, with errors:

[spkg-build] Undefined symbols for architecture arm64:
[spkg-build]   "___emutls_v.avma", referenced from:
[spkg-build]       _rdiviiz in libLfunction.1.0.1.dylib-master.o
[spkg-build]       _cxcompotor.constprop.0 in libLfunction.1.0.1.dylib-master.o
[spkg-build]       _gtofp.constprop.0 in libLfunction.1.0.1.dylib-master.o
[spkg-build]       __Z6data_EPcS_S_S_S_iPd in libLfunction.1.0.1.dylib-master.o
[spkg-build]   "___emutls_v.pari_mainstack", referenced from:
[spkg-build]       _cxcompotor.constprop.0 in libLfunction.1.0.1.dylib-master.o
[spkg-build]       _gtofp.constprop.0 in libLfunction.1.0.1.dylib-master.o
[spkg-build]       __Z6data_EPcS_S_S_S_iPd in libLfunction.1.0.1.dylib-master.o
[spkg-build] ld: symbol(s) not found for architecture arm64

and

[spkg-install] Undefined symbols for architecture arm64:
[spkg-install]   "__ZlsRSoPK12__mpz_struct", referenced from:
[spkg-install]       __ZNK6Givaro7Integer5printERSo in libgivaro.9.dylib-master.o
[spkg-install]       __ZN6GivarolsERSoRKNS_7IntegerE in libgivaro.9.dylib-master.o
[spkg-install]   "__ZrsRSiP12__mpz_struct", referenced from:
[spkg-install]       __ZN6GivarorsERSiRNS_7IntegerE in libgivaro.9.dylib-master.o
[spkg-install] ld: symbol(s) not found for architecture arm64

and

[spkg-install] Undefined symbols for architecture arm64:
[spkg-install]   "__ZlsRSoPK12__mpq_struct", referenced from:
[spkg-install]       __ZN12_GLOBAL__N_116write_polyhedronERSoRKN23Parma_Polyhedra_Library12C_PolyhedronENS_14RepresentationE in ppl_lcdd.o
[spkg-install]   "__ZlsRSoPK12__mpz_struct", referenced from:
[spkg-install]       __ZN12_GLOBAL__N_113guarded_writeI10__gmp_exprIA1_12__mpz_structS3_EEEvRSoRKT_ in ppl_lcdd.o
[spkg-install]   "__ZrsRSiP12__mpq_struct", referenced from:
[spkg-install]       __ZN12_GLOBAL__N_117read_coefficientsERSiNS_11Number_TypeERSt6vectorI10__gmp_exprIA1_12__mpz_structS5_ESaIS6_EERS6_ in ppl_lcdd.o
[spkg-install]   "__ZrsRSiP12__mpz_struct", referenced from:
[spkg-install]       __ZN12_GLOBAL__N_117read_coefficientsERSiNS_11Number_TypeERSt6vectorI10__gmp_exprIA1_12__mpz_structS5_ESaIS6_EERS6_ in ppl_lcdd.o
[spkg-install] ld: symbol(s) not found for architecture arm64

respectively.

This is with the current PR on top of 10.4.beta5 — I can't build beta6 because of the problems with fflas-fpack. I also don't know if these are new to this version of gcc, but I'll try to check.

mkoeppe · 2024-05-17T18:00:42Z

I don't think we have supported building with gcc from SPKG on macOS

jhpalmieri · 2024-05-17T18:01:52Z

I don't think we have supported building with gcc from SPKG on macOS

Okay, then I won't worry about it. I realize that I can't check if the problems are new because the whole point is that I can't build the old gcc spkg.

culler · 2024-05-18T14:23:38Z

I was able to build gfortran-13.2.0 from this PR with no errors. (There were around 40,000 warnings, but I think that is normal.). This was on an Intel mac mini running macOS 14.4.1.

mkoeppe · 2024-05-18T14:49:23Z

Thanks!

faisalfakhro and others added 27 commits April 25, 2024 17:30

add sha256

d879f03

sha256/sha1 checksum priority

b45ada6

update checksums.ini files with sha256

bde1df4

remove md5, cksum

d890bd9

build/pkgs/symengine_py/checksums.ini: Fix upstream_url

65f1f01

sage_bootstrap.tarball: After checking sha256, also check sha1 for co…

685b4dc

…nsistency

sage -package fix-checksum: If sha256 is not available, create it

d75ca34

Update checksums.ini for updated packages

626539b

update packages checksums.ini

a3ccd8d

Merge branch 'develop' into update_hashes

091aa47

Merge branch 'pip-24' into update_hashes

03bfd92

Merge branch 'gambit_remove' into update_hashes

0fe263a

sage -package fix-checksum :all:

4044324

Merge remote-tracking branch 'upstream/develop' into update_hashes

f2f63e9

build/pkgs/{editables,fricas}: Add sha256

d831891

Merge branch 'singular-4.3.2p16' into update_hashes

7587edf

Merge branch 'update-libgc-8_2_6' into update_hashes

840eea0

build/pkgs/{gc,singular}: Add sha256

72b755a

Merge branch 'culler/develop' into update_hashes

d955e50

build/pkgs/python3: Add sha256

8b0768a

Merge remote-tracking branch 'upstream/develop' into update_hashes

1578923

sage -package fix-checksum :all:

eb08315

build/pkgs/gcc: Update to 13.2.0

427f8d0

build/pkgs/gcc/patches: Add from https://github.com/Homebrew/homebrew…

33f30a9

…-core/blob/50d9d78a4a09b42807b0a8f74f1f2f8933051a7b/Formula/g/[email protected]

build/pkgs/gcc/patches/gcc-multilib-multiarch.patch: Update from http…

f4178e2

…s://salsa.debian.org/toolchain-team/gcc/-/blob/gcc-13-debian/debian/patches/gcc-multilib-multiarch.diff\?ref_type\=heads

build/pkgs/gcc/patches/gcc-multilib-multiarch.patch: Raise one subdir…

6fe25bd

… level

build/pkgs/gcc/patches/gcc-multiarch.patch: Import from https://salsa…

e225ac1

….debian.org/toolchain-team/gcc/-/blob/gcc-13-debian/debian/patches/gcc-multiarch.diff\?ref_type\=heads

github-actions bot added the v: large label May 16, 2024

Remove debian-buster-gcc_spkg from CI

624f90f

culler added the s: positive review label May 18, 2024

Matthias Koeppe added 2 commits May 19, 2024 11:22

Merge branch 'update_hashes' into gcc_gfortran_13_2

3b3f7f0

sage -package fix-checksum :all:

4187f5c

vbraun merged commit aa6f8a7 into sagemath:develop May 25, 2024

github-actions bot removed the s: positive review label May 25, 2024

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`gcc`, `gfortran`: Update to 13.2.0; remove `debian-buster-gcc_spkg` from CI#38008

`gcc`, `gfortran`: Update to 13.2.0; remove `debian-buster-gcc_spkg` from CI#38008
vbraun merged 30 commits intosagemath:developfrom
mkoeppe:gcc_gfortran_13_2

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