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Avoid holding GIL while calling retrieveContext. #61588
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As part of debugging #60290, we discovered the following deadlock: ``` Thread 79 (Thread 0x7f52ff7fe700 (LWP 205437)): #0 pthread_cond_timedwait@@GLIBC_2.3.2 () at ../sysdeps/unix/sysv/linux/x86_64/pthread_cond_timedwait.S:225 #1 0x0000564880199152 in PyCOND_TIMEDWAIT (cond=0x564880346080 <gil_cond>, mut=0x564880346100 <gil_mutex>, us=5000) at /home/builder/ktietz/cos6/ci_cos6/python_1622833237666/work/Python/condvar.h:103 #2 take_gil (tstate=0x7f5254005ef0) at /home/builder/ktietz/cos6/ci_cos6/python_1622833237666/work/Python/ceval_gil.h:224 #3 0x0000564880217b62 in PyEval_AcquireThread (tstate=0x7f5254005ef0) at /home/builder/ktietz/cos6/ci_cos6/python_1622833237666/work/Python/ceval.c:278 #4 0x00007f557d54aabd in pybind11::gil_scoped_acquire::gil_scoped_acquire() () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_python.so #5 0x00007f557da7792f in (anonymous namespace)::concrete_decref_fn(c10::impl::PyInterpreter const*, _object*) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_python.so #6 0x00007f5560dadba6 in c10::TensorImpl::release_resources() () from /opt/conda/lib/python3.6/site-packages/torch/lib/libc10.so #7 0x00007f5574c885bc in std::_Sp_counted_ptr_inplace<torch::distributed::autograd::DistAutogradContext, std::allocator<torch::distributed::autograd::DistAutogradContext>, (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #8 0x00007f5574c815e9 in std::__detail::_Hashtable_alloc<std::allocator<std::__detail::_Hash_node<std::pair<long const, std::shared_ptr<torch::distributed::autograd::DistAutogradContext> >, false> > >::_M_deallocate_node(std::__detail::_Hash_node<std::pair<long const, std::shared_ptr<torch::distributed::autograd::DistAutogradContext> >, false>*) [clone .isra.325] () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #9 0x00007f5574c81bf1 in torch::distributed::autograd::DistAutogradContainer::eraseContextIdAndReset(torch::distributed::autograd::DistAutogradContainer::ContextsShard&, long) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #10 0x00007f5574c86e83 in torch::distributed::autograd::DistAutogradContainer::releaseContextIfPresent(long) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #11 0x00007f5574cc6395 in torch::distributed::rpc::RequestCallbackNoPython::processCleanupAutogradContextReq(torch::distributed::rpc::RpcCommandBase&) const () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #12 0x00007f5574cccf15 in torch::distributed::rpc::RequestCallbackNoPython::processRpc(torch::distributed::rpc::RpcCommandBase&, torch::distributed::rpc::MessageType const&, std::vector<c10::Stream, std::allocator<c10::Stream> >) const () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so Thread 72 (Thread 0x7f53077fe700 (LWP 205412)): #0 __lll_lock_wait () at ../sysdeps/unix/sysv/linux/x86_64/lowlevellock.S:135 #1 0x00007f55bc62adbd in __GI___pthread_mutex_lock (mutex=0x564884396440) at ../nptl/pthread_mutex_lock.c:80 #2 0x00007f5574c82a2f in torch::distributed::autograd::DistAutogradContainer::retrieveContext(long) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #3 0x00007f557de9bb2f in pybind11::cpp_function::initialize<torch::distributed::autograd::(anonymous namespace)::dist_autograd_init(_object*, _object*)::{lambda(long)#11}, pybind11::dict, long, pybind11::name, pybind11::scope, pybind11::sibling, char [931], pybind11::arg>(torch::distributed::autograd::(anonymous namespace)::dist_autograd_init(_object*, _object*)::{lambda(long)#11}&&, pybind11::dict (*)(long), pybind11::name const&, pybind11::scope const&, pybind11::sibling const&, char const (&) [931], pybind11::arg const&)::{lambda(pybind11::detail::function_call&)#3}::_FUN(pybind11::detail::function_call) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_python.so ``` Basically Thread 72, holds GIL and tries to acquire the lock for DistAutogradContainer to perform a lookup on a map. On the other hand, Thread 79 holds the lock on DistAutogradContainer to remove a Tensor and as part of TensorImpl destructor, concrete_decref_fn is called which waits for GIL. As a result, we have a deadlock. To fix this issue, I've ensured we release GIL when we call `retrieveContext` and acquire it later when needed. Differential Revision: [D29682624](https://our.internmc.facebook.com/intern/diff/D29682624/) [ghstack-poisoned]
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💊 CI failures summary and remediationsAs of commit cd42f6e (more details on the Dr. CI page and at hud.pytorch.org/pr/61588):
Preview docs built from this PR This comment was automatically generated by Dr. CI (expand for details).Follow this link to opt-out of these comments for your Pull Requests.Please report bugs/suggestions to the (internal) Dr. CI Users group. |
pritamdamania87
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As part of debugging #60290, we discovered the following deadlock: ``` Thread 79 (Thread 0x7f52ff7fe700 (LWP 205437)): #0 pthread_cond_timedwait@@GLIBC_2.3.2 () at ../sysdeps/unix/sysv/linux/x86_64/pthread_cond_timedwait.S:225 #1 0x0000564880199152 in PyCOND_TIMEDWAIT (cond=0x564880346080 <gil_cond>, mut=0x564880346100 <gil_mutex>, us=5000) at /home/builder/ktietz/cos6/ci_cos6/python_1622833237666/work/Python/condvar.h:103 #2 take_gil (tstate=0x7f5254005ef0) at /home/builder/ktietz/cos6/ci_cos6/python_1622833237666/work/Python/ceval_gil.h:224 #3 0x0000564880217b62 in PyEval_AcquireThread (tstate=0x7f5254005ef0) at /home/builder/ktietz/cos6/ci_cos6/python_1622833237666/work/Python/ceval.c:278 #4 0x00007f557d54aabd in pybind11::gil_scoped_acquire::gil_scoped_acquire() () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_python.so #5 0x00007f557da7792f in (anonymous namespace)::concrete_decref_fn(c10::impl::PyInterpreter const*, _object*) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_python.so #6 0x00007f5560dadba6 in c10::TensorImpl::release_resources() () from /opt/conda/lib/python3.6/site-packages/torch/lib/libc10.so #7 0x00007f5574c885bc in std::_Sp_counted_ptr_inplace<torch::distributed::autograd::DistAutogradContext, std::allocator<torch::distributed::autograd::DistAutogradContext>, (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #8 0x00007f5574c815e9 in std::__detail::_Hashtable_alloc<std::allocator<std::__detail::_Hash_node<std::pair<long const, std::shared_ptr<torch::distributed::autograd::DistAutogradContext> >, false> > >::_M_deallocate_node(std::__detail::_Hash_node<std::pair<long const, std::shared_ptr<torch::distributed::autograd::DistAutogradContext> >, false>*) [clone .isra.325] () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #9 0x00007f5574c81bf1 in torch::distributed::autograd::DistAutogradContainer::eraseContextIdAndReset(torch::distributed::autograd::DistAutogradContainer::ContextsShard&, long) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #10 0x00007f5574c86e83 in torch::distributed::autograd::DistAutogradContainer::releaseContextIfPresent(long) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #11 0x00007f5574cc6395 in torch::distributed::rpc::RequestCallbackNoPython::processCleanupAutogradContextReq(torch::distributed::rpc::RpcCommandBase&) const () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #12 0x00007f5574cccf15 in torch::distributed::rpc::RequestCallbackNoPython::processRpc(torch::distributed::rpc::RpcCommandBase&, torch::distributed::rpc::MessageType const&, std::vector<c10::Stream, std::allocator<c10::Stream> >) const () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so Thread 72 (Thread 0x7f53077fe700 (LWP 205412)): #0 __lll_lock_wait () at ../sysdeps/unix/sysv/linux/x86_64/lowlevellock.S:135 #1 0x00007f55bc62adbd in __GI___pthread_mutex_lock (mutex=0x564884396440) at ../nptl/pthread_mutex_lock.c:80 #2 0x00007f5574c82a2f in torch::distributed::autograd::DistAutogradContainer::retrieveContext(long) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_cpu.so #3 0x00007f557de9bb2f in pybind11::cpp_function::initialize<torch::distributed::autograd::(anonymous namespace)::dist_autograd_init(_object*, _object*)::{lambda(long)#11}, pybind11::dict, long, pybind11::name, pybind11::scope, pybind11::sibling, char [931], pybind11::arg>(torch::distributed::autograd::(anonymous namespace)::dist_autograd_init(_object*, _object*)::{lambda(long)#11}&&, pybind11::dict (*)(long), pybind11::name const&, pybind11::scope const&, pybind11::sibling const&, char const (&) [931], pybind11::arg const&)::{lambda(pybind11::detail::function_call&)#3}::_FUN(pybind11::detail::function_call) () from /opt/conda/lib/python3.6/site-packages/torch/lib/libtorch_python.so ``` Basically Thread 72, holds GIL and tries to acquire the lock for DistAutogradContainer to perform a lookup on a map. On the other hand, Thread 79 holds the lock on DistAutogradContainer to remove a Tensor and as part of TensorImpl destructor, concrete_decref_fn is called which waits for GIL. As a result, we have a deadlock. To fix this issue, I've ensured we release GIL when we call `retrieveContext` and acquire it later when needed. Differential Revision: [D29682624](https://our.internmc.facebook.com/intern/diff/D29682624/) ghstack-source-id: 133493659 Pull Request resolved: #61588
mrshenli
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LGTM! Thanks for fixing!
pritamdamania87
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Jul 13, 2021
Following the pattern in #61588 to avoid deadlocks as much as possible. Differential Revision: [D29683451](https://our.internmc.facebook.com/intern/diff/D29683451/) [ghstack-poisoned]
pritamdamania87
pushed a commit
that referenced
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Jul 13, 2021
Following the pattern in #61588 to avoid deadlocks as much as possible. Differential Revision: [D29683451](https://our.internmc.facebook.com/intern/diff/D29683451/) ghstack-source-id: 133497897 Pull Request resolved: #61593
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This pull request has been merged in 5ebc7c9. |
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Stack from ghstack:
As part of debugging #60290,
we discovered the following deadlock:
Basically Thread 72, holds GIL and tries to acquire the lock for
DistAutogradContainer to perform a lookup on a map. On the other hand,
Thread 79 holds the lock on DistAutogradContainer to remove a Tensor and as
part of TensorImpl destructor, concrete_decref_fn is called which waits for
GIL. As a result, we have a deadlock.
To fix this issue, I've ensured we release GIL when we call
retrieveContextand acquire it later when needed.
Differential Revision: D29682624