Hi Shujun,

Thank you for producing this tool, I've had nice preliminary results with it testing on smaller genomes.
I now want to use it for a very large plant genome. I know I can divide the run by LTR/TIR/Helitron and then combine later. Can I also split by chromosome and run each in parallel to produce a raw library of each repeat type for each chromosome and combine for the rest of pipeline? Or will this cause any problems?

Many thanks,

Ben.