Using miniwdl with WDL scripts

This folder contains course example script files for the miniwdl course for WDL. There are companion screencasts on YouTube (playlist shown below) - link

FAQ snd Docs

• One-page FAQ for miniwdl - link
• Documentation for miniwdl - link

Running WDL workflow scripts with miniwdl

Using miniwdl to run WDL scripts, you'll run jobs which follow the pattern shown below:

• FILES - input data and configuration files on a file system (local or cloud)
• FILES - output data and log files are stored on a file system (local or cloud)
• COMPUTE - (or job analysis) runs on one or more machines
  • compute often runs on VMs (virtual machines - can be cloud-hosted, AWS, Azure, GCP...)
  • workflow tasks run from docker container images