Add Lifescience Sub-set Support for MMLU & SciEval (datasets + configs + loader)#2059
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MaiziXiao merged 4 commits intoopen-compass:mainfrom May 9, 2025
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…ets + configs + loader)
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针对 MMLU的不同配置，直接在 MMLU的文件夹中创建一个新的配置，不要重新创建 Dataset |
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不要随意更新 pre-commit-config 中的内容
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| SciEval_lifescience_subsets = [ | ||
| 'biology', # 大学生物学 | ||
| ] |
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| examples: List[dict] = [] | ||
| for ex in raw_iter: | ||
| if (ex.get('category') != 'biology' | ||
| or ex.get('type') != 'multiple-choice'): | ||
| continue | ||
|
|
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| ans_list = ex.get('answer') or ex.get('answers') or [] | ||
| if not ans_list: | ||
| continue | ||
| target = ans_list[0] |
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该数据集 load 方式是否针对 SciEval 的所有子维度均生效？不要将子维度写死在读取逻辑中
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) * style: pass all formatting hooks (yapf & quote fixer) * revise name:Add Lifescience Sub-set Support for MMLU & SciEval (datasets + configs + loader) * revise name:Add Lifescience SciEval (datasets + configs + loader+dataset-index.yml) * Add Lifescience SciEval (datasets + configs + loader+dataset-index.yml) --------- Co-authored-by: root <[email protected]>
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…) (open-compass#2087) This reverts commit c5048bf.
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) * style: pass all formatting hooks (yapf & quote fixer) * revise name:Add Lifescience Sub-set Support for MMLU & SciEval (datasets + configs + loader) * revise name:Add Lifescience SciEval (datasets + configs + loader+dataset-index.yml) * Add Lifescience SciEval (datasets + configs + loader+dataset-index.yml) --------- Co-authored-by: root <[email protected]>
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…) (open-compass#2087) This reverts commit c5048bf.
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) * style: pass all formatting hooks (yapf & quote fixer) * revise name:Add Lifescience Sub-set Support for MMLU & SciEval (datasets + configs + loader) * revise name:Add Lifescience SciEval (datasets + configs + loader+dataset-index.yml) * Add Lifescience SciEval (datasets + configs + loader+dataset-index.yml) --------- Co-authored-by: root <[email protected]>
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…) (open-compass#2087) This reverts commit 16c034a.
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Thanks for your contribution and we appreciate it a lot. The following instructions would make your pull request more healthy and more easily get feedback. If you do not understand some items, don't worry, just make the pull request and seek help from maintainers.
Motivation
OpenCompass currently lacks out-of-the-box support for evaluating models on the lifescience / biology sub-sets of the MMLU and SciEval benchmarks. These slices are critical for biomedical and healthcare LLM research. This PR introduces native loaders and config files so users can run evaluations with a single command.
Modification
Dataset loader
• opencompass/datasets/SciEval_lifescience.py — parses the biology + multiple-choice sub-set of SciEval and returns a DatasetDict.
Configs – SciEval
• opencompass/configs/datasets/SciEval_lifscience/SciEval_lifescience_gen.py
• opencompass/configs/datasets/SciEval_lifscience/SciEval_lifescience_llmjudge_gen.py
Configs – MMLU
• opencompass/configs/datasets/mmlu_lifescience/* — evaluation configs for the MMLU lifescience sub-set.
Registry
• opencompass/datasets/init.py — explicitly imports SciEvalDataset; removes wildcard import.
Code quality
All new/modified files formatted with isort, yapf, docformatter; flake8 passes with zero errors.
BC-breaking (Optional)
Does the modification introduce changes that break the backward compatibility of the downstream repositories?
If so, please describe how it breaks the compatibility and how the downstream projects should modify their code to keep compatibility with this PR.
Use cases (Optional)
If this PR introduces a new feature, it is better to list some use cases here and update the documentation.
Checklist
Before PR:
After PR: