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CHANGELOG.md

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Changelog for SSSOM

Next

  • Add composed entity expression as a new value in the EntityType enumeration (issue).
  • Add predicate_type slot (previously defined but unused) to the Mapping and MappingSet classes (issue).
  • Add similarity_measure slot to the MappingSet class (issue).
  • Add sssom_version slot to the MappingSet class (issue).
  • Change the type of the see_also slot to xsd:anyURI (issue).
  • Add mapping_set_confidence slot to the MappingSet class (issue).
  • Updated the RDF binding of sssom:publication_date from dcterms:created to dcterms:issued, which is the more appropriate property to use in this case.
  • Add mapping_tool_id slot to the Mapping and MappingSet classes (issue).
  • Add record_id slot to the Mapping class (issue).
  • Change all URI-typed slots to clarify that they expect non-relative URIs as values (issue).
  • Add curation_rule and curation_rule_text to the MappingSet class and made propagatable (issue).
  • Add cardinality_scope slot (issue).
  • Add new value 0:0 to the mapping_cardinality_enum (issue).
  • Add specification for the RDF serialisation (discussion).
  • Development snapshots of SSSOM schema can now be released using GitHub's pre-release feature (issue).
  • Add review_date slot (issue)
  • Add reviewer_agreement slot (issue)
  • Allow encoding pipe characters in multi-valued slots in SSSOM/TSV format (issue).
  • Specify a standard SSSOM hashing function (issue).

SSSOM version 1.0.0

  • Add the concept of "propagatable slots".
  • Add the curie_map to the model (instead of it being a specificity of the SSSOM/TSV format).
  • Add the concept of "extension slots".
  • Add the concept of "literal mappings".
  • Add the entity reference sssom:NoTermFound to express the concept of an "unmapped entity" (issue)
  • Replace semantic_similarity_score with similarity_score and semantic_similarity_measure with similarity_measure in the data model (issue)

SSSOM version 0.15.1

  • Add recommendation to sort the keys in the YAML metadata block.
  • Double-typed slots explicitly constrained to the [0.0,1.0] range, as per their description.

SSSOM version 0.15.0

SSSOM version 0.13.0

  • The necessity of the "canonical column ordering" was downgraded from MUST to SHOULD (#285)
  • Documents clearly that built-in prefixes MUST NOT be redefined (#285)

SSSOM version 0.11.0

Summary

New elements:

  • mapping_set_title to capture a human readable title for a mapping set
  • registry_title and registry_description to capture the human readable title and description of an SSSOM mapping set registry
  • curation_rule to capture a (potentially) complex (set of) condition(s) executed by an agent (usually human) that led to the establishment of a mapping.

Updated elements:

  • Adding mapping_source slot to Mapping by @matentzn in #230
  • Improve documentation for subject_category and object_category elements

Documentation

Quality control and Technical infrastructure

  • Make adding a concrete SSSOM example part of the new element request
  • Adding QC checks for example SSSOM files hosted in the repo

SSSOM version 0.10.1

SSSOM version 0.9.4

SSSOM version 0.9.3

SSSOM version 0.9.2

SSSOM version 0.9.1

SSSOM version 0.9.0