Switch to InterPro API#74
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pbnjay merged 8 commits intojoiningdata:masterfrom Oct 5, 2023
matthiasblum:master
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Wow this is great. I haven't had time to work on this project lately so I appreciate you breathing new life into it. |
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As you might be aware, the Pfam legacy website will be decommissioned very soon, which will cause
lollipopsto fail when using the-pfamoption.It also has been reported that domains and motif features are not displayed when retrieving data from UniProt (#73).
This PR changes the source of Pfam domains and motif features to the InterPro API (the
-pfamand-loptions were removed).I've also added a call to the UniProt API to retrieve the protein length.