Flatten op_args to be able to find nested widgets by hoxbro · Pull Request #699 · holoviz/hvplot

hoxbro · 2022-01-22T14:37:25Z

Fixes #697

jbednar

Makes sense, thanks!

hoxbro · 2022-02-03T15:17:16Z

The error could be recreated with

import xarray as xr
import hvplot.xarray # noqa
import panel.widgets as pnw

ds = xr.tutorial.load_dataset('air_temperature')
diff = ds.air.interactive.sel(time=pnw.DiscreteSlider) - ds.air.mean('time')
kind = pnw.Select(options=['contour', 'contourf', 'image'])
diff.hvplot(cmap='RdBu_r', clim=(-20, 20), kind=kind)

The custom flatten function will be added with holoviz/holoviews#5184. Alternative I could also add it to hvplot.

jbednar · 2022-02-03T15:19:46Z

If I understand correctly, I think having it in HoloViews should be sufficient; no need to duplicate that.

hoxbro · 2022-02-03T15:24:08Z

You understood it correctly.

hoxbro · 2022-02-16T15:38:01Z

With the release of Holoviews 1.14.8, can I get one to rerun the tests?

hoxbro · 2022-02-16T16:53:50Z

The error do not seem to be related to my changes. As when I run it locally on master it freezes at hvplot/hvplot/tests/testoptions.py::TestOptions::test_alpha_dim_0_scatter. The weird thing is it only happens when I run the whole thing with pytest hvplot/tests if I run pytest hvplot/tests/testoptions.py::TestOptions::test_alpha_dim_0_scatter it passes without any problem.

Log from pytest hvplot/tests

============================= test session starts ==============================
platform linux -- Python 3.8.12, pytest-6.2.5, py-1.11.0, pluggy-1.0.0 -- /home/shh/miniconda3/envs/holoviz/bin/python
cachedir: .pytest_cache
benchmark: 3.4.1 (defaults: timer=time.perf_counter disable_gc=False min_rounds=5 min_time=0.000005 max_time=1.0 calibration_precision=10 warmup=False warmup_iterations=100000)
rootdir: /home/shh/Development/holoviz/hvplot, configfile: tox.ini
plugins: cov-3.0.0, dash-2.0.0, nbsmoke-0.6.0, anyio-3.4.0, benchmark-3.4.1
collecting ... collected 401 items

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hvplot/tests/testcharts.py::TestChart2D::test_2d_chart_1_paths PASSED    [  0%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_defaults_0_points PASSED [  0%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_defaults_1_paths PASSED [  0%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_index_and_c_0_points PASSED [  1%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_index_and_c_1_paths PASSED [  1%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_including_index_0_points PASSED [  1%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_including_index_1_paths PASSED [  1%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_to_all_0_points PASSED [  2%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_to_all_1_paths PASSED [  2%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_to_all_with_use_index_as_false_0_points PASSED [  2%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_to_all_with_use_index_as_false_1_paths PASSED [  2%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_to_list_0_points PASSED [  3%]
hvplot/tests/testcharts.py::TestChart2D::test_2d_set_hover_cols_to_list_1_paths PASSED [  3%]
hvplot/tests/testcharts.py::TestChart2D::test_heatmap_2d_derived_x_and_y PASSED [  3%]
hvplot/tests/testcharts.py::TestChart2D::test_heatmap_2d_index_columns PASSED [  3%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_chart_0_points PASSED [  4%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_chart_1_paths PASSED [  4%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_defaults_0_points PASSED [  4%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_defaults_1_paths PASSED [  4%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_index_and_c_0_points PASSED [  5%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_index_and_c_1_paths PASSED [  5%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_including_index_0_points PASSED [  5%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_including_index_1_paths PASSED [  5%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_to_all_0_points PASSED [  6%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_to_all_1_paths PASSED [  6%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_to_all_with_use_index_as_false_0_points PASSED [  6%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_to_all_with_use_index_as_false_1_paths PASSED [  6%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_to_list_0_points PASSED [  7%]
hvplot/tests/testcharts.py::TestChart2DDask::test_2d_set_hover_cols_to_list_1_paths PASSED [  7%]
hvplot/tests/testcharts.py::TestChart2DDask::test_heatmap_2d_derived_x_and_y PASSED [  7%]
hvplot/tests/testcharts.py::TestChart2DDask::test_heatmap_2d_index_columns XFAIL [  7%]
hvplot/tests/testcharts.py::TestChart1D::test_area_stacked PASSED        [  8%]
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hvplot/tests/testcharts.py::TestChart1D::test_default_y_not_in_by PASSED [  8%]
hvplot/tests/testcharts.py::TestChart1D::test_histogram_by_category_legend_position PASSED [  8%]
hvplot/tests/testcharts.py::TestChart1D::test_includes_str_if_no_num_chart_0_line PASSED [  9%]
hvplot/tests/testcharts.py::TestChart1D::test_includes_str_if_no_num_chart_1_area PASSED [  9%]
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hvplot/tests/testcharts.py::TestChart1D::test_only_includes_num_chart_0_line PASSED [  9%]
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hvplot/tests/testcharts.py::TestChart1D::test_only_includes_num_chart_2_scatter PASSED [ 10%]
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hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_0_line PASSED   [ 11%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_1_area PASSED   [ 11%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_2_scatter PASSED [ 11%]
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hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_0_line PASSED [ 15%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_1_area PASSED [ 15%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_2_scatter PASSED [ 15%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_as_all_0_line PASSED [ 15%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_as_all_1_area PASSED [ 16%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_as_all_2_scatter PASSED [ 16%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_as_all_with_use_index_as_false_0_line PASSED [ 16%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_as_all_with_use_index_as_false_1_area PASSED [ 16%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_hover_cols_as_all_with_use_index_as_false_2_scatter PASSED [ 17%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_index_in_hover_cols_0_line PASSED [ 17%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_index_in_hover_cols_1_area PASSED [ 17%]
hvplot/tests/testcharts.py::TestChart1D::test_tidy_chart_with_index_in_hover_cols_2_scatter PASSED [ 17%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_as_index_with_x_as_derived_datetime_using_index PASSED [ 18%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_as_index_with_x_as_derived_datetime_using_name PASSED [ 18%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_does_not_sort_on_plot_if_sort_date_off PASSED [ 18%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_does_not_sort_on_plot_if_sort_date_off_using_index_as_x PASSED [ 18%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_sorts_on_plot PASSED [ 19%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_sorts_on_plot_using_index_as_x PASSED [ 19%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_with_by_as_derived_datetime PASSED [ 19%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_with_groupby_as_derived_datetime PASSED [ 19%]
hvplot/tests/testcharts.py::TestChart1D::test_time_df_with_x_as_derived_datetime PASSED [ 20%]
hvplot/tests/testcharts.py::TestChart1D::test_use_index_disabled_uses_first_cols_0_line PASSED [ 20%]
hvplot/tests/testcharts.py::TestChart1D::test_use_index_disabled_uses_first_cols_1_area PASSED [ 20%]
hvplot/tests/testcharts.py::TestChart1D::test_use_index_disabled_uses_first_cols_2_scatter PASSED [ 20%]
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hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_1_area PASSED   [ 21%]
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hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_auto_group_label_2_scatter PASSED [ 22%]
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hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_labels_2_scatter PASSED [ 23%]
hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_legend_position_0_line PASSED [ 23%]
hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_legend_position_1_area PASSED [ 23%]
hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_legend_position_2_scatter PASSED [ 23%]
hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_ranges_0_line PASSED [ 24%]
hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_ranges_1_area PASSED [ 24%]
hvplot/tests/testcharts.py::TestChart1D::test_wide_chart_ranges_2_scatter PASSED [ 24%]
hvplot/tests/testcharts.py::TestChart1DDask::test_area_stacked PASSED    [ 24%]
hvplot/tests/testcharts.py::TestChart1DDask::test_by_datetime_accessor SKIPPED [ 25%]
hvplot/tests/testcharts.py::TestChart1DDask::test_default_y_not_in_by PASSED [ 25%]
hvplot/tests/testcharts.py::TestChart1DDask::test_histogram_by_category_legend_position PASSED [ 25%]
hvplot/tests/testcharts.py::TestChart1DDask::test_includes_str_if_no_num_chart_0_line PASSED [ 25%]
hvplot/tests/testcharts.py::TestChart1DDask::test_includes_str_if_no_num_chart_1_area PASSED [ 26%]
hvplot/tests/testcharts.py::TestChart1DDask::test_includes_str_if_no_num_chart_2_scatter PASSED [ 26%]
hvplot/tests/testcharts.py::TestChart1DDask::test_only_includes_num_chart_0_line PASSED [ 26%]
hvplot/tests/testcharts.py::TestChart1DDask::test_only_includes_num_chart_1_area PASSED [ 26%]
hvplot/tests/testcharts.py::TestChart1DDask::test_only_includes_num_chart_2_scatter PASSED [ 27%]
hvplot/tests/testcharts.py::TestChart1DDask::test_scatter_color_by_legend_position PASSED [ 27%]
hvplot/tests/testcharts.py::TestChart1DDask::test_scatter_color_set_to_series PASSED [ 27%]
hvplot/tests/testcharts.py::TestChart1DDask::test_scatter_size_set_to_series PASSED [ 27%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_0_line PASSED [ 28%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_1_area PASSED [ 28%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_2_scatter PASSED [ 28%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_index_0_line PASSED [ 28%]
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hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_index_by_2_scatter PASSED [ 30%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_index_by_legend_position_0_line PASSED [ 30%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_index_by_legend_position_1_area PASSED [ 30%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_index_by_legend_position_2_scatter PASSED [ 30%]
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hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_2_scatter PASSED [ 32%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_as_all_0_line PASSED [ 32%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_as_all_1_area PASSED [ 32%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_as_all_2_scatter PASSED [ 33%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_as_all_with_use_index_as_false_0_line PASSED [ 33%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_as_all_with_use_index_as_false_1_area PASSED [ 33%]
hvplot/tests/testcharts.py::TestChart1DDask::test_tidy_chart_with_hover_cols_as_all_with_use_index_as_false_2_scatter PASSED [ 33%]
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hvplot/tests/testgeo.py::TestGeoAnnotation::test_plot_with_specific_tile_obj SKIPPED [ 45%]
hvplot/tests/testgeo.py::TestGeoAnnotation::test_plot_with_specific_tiles SKIPPED [ 45%]
hvplot/tests/testgeo.py::TestGeoAnnotation::test_plot_with_tiles SKIPPED [ 45%]
hvplot/tests/testgeo.py::TestGeoElements::test_geo_hexbin SKIPPED (g...) [ 45%]
hvplot/tests/testgeo.py::TestGeoElements::test_geo_opts SKIPPED (geo...) [ 46%]
hvplot/tests/testgeo.py::TestGeoElements::test_geo_opts_with_width SKIPPED [ 46%]
hvplot/tests/testgeo.py::TestGeoElements::test_geo_points SKIPPED (g...) [ 46%]
hvplot/tests/testgeo.py::TestGeoPandas::test_points_hover_cols_does_not_include_geometry_when_all SKIPPED [ 46%]
hvplot/tests/testgeo.py::TestGeoPandas::test_points_hover_cols_index_in_list SKIPPED [ 47%]
hvplot/tests/testgeo.py::TestGeoPandas::test_points_hover_cols_is_empty_by_default SKIPPED [ 47%]
hvplot/tests/testgeo.py::TestGeoPandas::test_points_hover_cols_when_all_and_use_columns_is_false SKIPPED [ 47%]
hvplot/tests/testgeo.py::TestGeoPandas::test_points_hover_cols_with_by_set_to_name SKIPPED [ 47%]
hvplot/tests/testgeo.py::TestGeoPandas::test_points_hover_cols_with_c_set_to_name SKIPPED [ 48%]
hvplot/tests/testgridplots.py::TestGridPlots::test_dataset_infer_dimension_params_from_xarray_attrs PASSED [ 48%]
hvplot/tests/testgridplots.py::TestGridPlots::test_img_dataarray_groupby_infers_correct_other_dims PASSED [ 48%]
hvplot/tests/testgridplots.py::TestGridPlots::test_img_dataarray_infers_correct_other_dims PASSED [ 48%]
hvplot/tests/testgridplots.py::TestGridPlots::test_img_infer_dimension_params_from_xarray_attrs PASSED [ 49%]
hvplot/tests/testgridplots.py::TestGridPlots::test_line_infer_dimension_params_from_xarray_attrs PASSED [ 49%]
hvplot/tests/testgridplots.py::TestGridPlots::test_multiple_zs PASSED    [ 49%]
hvplot/tests/testgridplots.py::TestGridPlots::test_points_infer_dimension_params_from_xarray_attrs PASSED [ 49%]
hvplot/tests/testgridplots.py::TestGridPlots::test_rgb_dataarray_explicit_args PASSED [ 50%]
hvplot/tests/testgridplots.py::TestGridPlots::test_rgb_dataarray_explicit_args_and_kind PASSED [ 50%]
hvplot/tests/testgridplots.py::TestGridPlots::test_rgb_dataarray_groupby_explicit PASSED [ 50%]
hvplot/tests/testgridplots.py::TestGridPlots::test_rgb_dataarray_groupby_infer PASSED [ 50%]
hvplot/tests/testgridplots.py::TestGridPlots::test_rgb_dataarray_no_args PASSED [ 51%]
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hvplot/tests/testgridplots.py::TestGridPlots::test_symmetric_with_big_img_sets_symmetric_to_false_without_calculating PASSED [ 52%]
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hvplot/tests/testnetworkx.py::TestOptions::test_nodes_are_not_sorted PASSED [ 53%]
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hvplot/tests/testoperations.py::TestDatashader::test_cmap_can_be_color_key PASSED [ 56%]
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hvplot/tests/testoperations.py::TestDatashader::test_color_dim_with_default_agg_0_rasterize PASSED [ 56%]
hvplot/tests/testoperations.py::TestDatashader::test_color_dim_with_default_agg_1_datashade PASSED [ 57%]
hvplot/tests/testoperations.py::TestDatashader::test_color_dim_with_string_agg_0_rasterize PASSED [ 57%]
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hvplot/tests/testoperations.py::TestDatashader::test_rasterize_by_cat PASSED [ 57%]
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hvplot/tests/testoperations.py::TestDatashader::test_xlim_affects_x_range PASSED [ 59%]
hvplot/tests/testoperations.py::TestChart2D::test_plot_resolution_0_image PASSED [ 59%]
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hvplot/tests/testoptions.py::TestOptions::test_alpha_dim_0_scatter

Log from pytest hvplot/tests/testoptions.py::TestOptions::test_alpha_dim_0_scatter

============================= test session starts ==============================
platform linux -- Python 3.8.12, pytest-6.2.5, py-1.11.0, pluggy-1.0.0 -- /home/shh/miniconda3/envs/holoviz/bin/python
cachedir: .pytest_cache
benchmark: 3.4.1 (defaults: timer=time.perf_counter disable_gc=False min_rounds=5 min_time=0.000005 max_time=1.0 calibration_precision=10 warmup=False warmup_iterations=100000)
rootdir: /home/shh/Development/holoviz/hvplot, configfile: tox.ini
plugins: cov-3.0.0, dash-2.0.0, nbsmoke-0.6.0, anyio-3.4.0, benchmark-3.4.1
collecting ... collected 1 item

hvplot/tests/testoptions.py::TestOptions::test_alpha_dim_0_scatter PASSED [100%]

=============================== warnings summary ===============================
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/matplotlib/__init__.py:169
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/matplotlib/__init__.py:169
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/matplotlib/__init__.py:169
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/matplotlib/__init__.py:169
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/matplotlib/__init__.py:169
  /home/shh/miniconda3/envs/holoviz/lib/python3.8/site-packages/matplotlib/__init__.py:169: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
    if LooseVersion(module.__version__) < minver:

../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/setuptools/_distutils/version.py:351
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/setuptools/_distutils/version.py:351
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/setuptools/_distutils/version.py:351
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/setuptools/_distutils/version.py:351
../../../miniconda3/envs/holoviz/lib/python3.8/site-packages/setuptools/_distutils/version.py:351
  /home/shh/miniconda3/envs/holoviz/lib/python3.8/site-packages/setuptools/_distutils/version.py:351: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
    other = LooseVersion(other)

hvplot/util.py:22
  /home/shh/Development/holoviz/hvplot/hvplot/util.py:22: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
    hv_version = LooseVersion(hv.__version__)

-- Docs: https://docs.pytest.org/en/stable/warnings.html
======================== 1 passed, 11 warnings in 1.04s ========================

Another thing is hvplot needs to be updated to use packaging.version else this line will fail:

hvplot/hvplot/plotting/scatter_matrix.py

Line 114 in 109726f

if hd.ds_version < '0.12.0':

jbednar · 2022-02-24T21:48:49Z

Thanks, @hoxbro for the cool new functionality, and thanks @sophiamyang for reporting the issue and inspiring him to do this work!

jbednar approved these changes Jan 22, 2022

View reviewed changes

hoxbro force-pushed the transform_groupby_list branch from 9814feb to b82d43c Compare February 2, 2022 20:07

hoxbro added 3 commits February 21, 2022 15:27

Flatten op_args to be able to find widget

e0c2194

Added .vscode to gitignore

85336e1

Added custom flatten function

fbcc04e

hoxbro force-pushed the transform_groupby_list branch from a75cc49 to fbcc04e Compare February 22, 2022 09:38

philippjfr merged commit fc071e2 into holoviz:master Feb 24, 2022

hoxbro deleted the transform_groupby_list branch February 24, 2022 14:28

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Flatten op_args to be able to find nested widgets#699

Flatten op_args to be able to find nested widgets#699
philippjfr merged 3 commits intoholoviz:masterfrom
hoxbro:transform_groupby_list

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edited

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