GemmiMol is a web-based macromolecular viewer focused on electron density.
It is a successor of the deprecated UglyMol.
It makes models and e.den. maps easy to recognize, navigate and interpret --: for crystallographers. It looks like Coot and walks (mouse controls) like Coot. But it's only a viewer. For situations when you want a quick look and simple edits without downloading the data and starting Coot. For instance, when screening Dimple results in a synchrotron. Of course, for this to work, it needs to be integrated into a website that provides the data access (see the UglyMol FAQ on how to do it).
Try it:
- 1MRU (60kDa, 3Å), and in dual view with PDB_REDO,
- 3KW8 (30kDa, 2.3Å),
- 4UN4 (protein-DNA complex, 2.37Å),
- a blob (Dimple result, thaumatin, 1.4Å),
- or any local file or wwPDB entry.
It also has a reciprocal space spin-off.
GemmiMol is a small (~3 KLOC) project The plan is to keep it small. But if you're missing some functionality, it won't hurt if you get in touch -- use Issues or email.
See the UglyMol Wiki for more information.