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npm GemmiMol is a web-based macromolecular viewer focused on electron density. It is a successor of the deprecated UglyMol.

It makes models and e.den. maps easy to recognize, navigate and interpret --: for crystallographers. It looks like Coot and walks (mouse controls) like Coot. But it's only a viewer. For situations when you want a quick look and simple edits without downloading the data and starting Coot. For instance, when screening Dimple results in a synchrotron. Of course, for this to work, it needs to be integrated into a website that provides the data access (see the UglyMol FAQ on how to do it).

Try it:

It also has a reciprocal space spin-off.

GemmiMol is a small (~3 KLOC) project The plan is to keep it small. But if you're missing some functionality, it won't hurt if you get in touch -- use Issues or email.

See the UglyMol Wiki for more information.

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Macromolecular viewer for crystallographers (WebGL)

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  • JavaScript 50.4%
  • TypeScript 46.6%
  • HTML 1.6%
  • Python 1.3%
  • Shell 0.1%