[tool_extensibility] Prototype Phase 8: App lifecycle management, run, VM Service connection, and hot reload

Part of the tool extensibility prototype effort.

Enable prototype flutter run workflow against extension-backed devices:

startApp, stopApp, isAppInstalled, uninstallApp, and log streaming over RPC.
VM Service URI extraction and connection.
Interactive hot reload (r) and restart (R) delegation through ResidentRunner.

[flutter_tools] Add DeviceService app launch and flutter run support …

[flutter_tools] Pass ExtensionFlutterProject to isAppInstalled/uninst…

[flutter_tools] Expand ExtensionDebuggingOptions, add prebuilt launch…

[flutter_tools] Migrate DeviceService installation to resolveApplication

[flutter_tools] Support directory bundles and preserve active log sub…

[flutter_tools] Guard getLogReader against synchronous connection dis…

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