improve scopus-pubmed map using linking ISSNs - #8
Merged
Merged
Conversation
dhimmel
commented
Sep 13, 2021
Comment on lines
575
to
+576
| 0154720 17025 | ||
| 0154720 99256 |
Owner
Author
There was a problem hiding this comment.
Note that the mapping is not bijective here. Looking into this:
- https://www.ncbi.nlm.nih.gov/nlmcatalog/0154720 is "Pflügers Archiv : European journal of physiology"
- https://scopus.com/sourceid/17025 is "Pflugers Archiv European Journal of Physiology"
- https://scopus.com/sourceid/99256 is "Pflugers Archiv fur die gesamte Physiologie des Menschen und der Tiere" and has "coverage discontinued in Scopus" with Scopus ISSN 0365-267X
There was a problem hiding this comment.
Sorry it wasn't more helpful. Still, this gives a way to spot issues like that.
closes #7 Downloaded issnltables.zip from https://www.issn.org/download/, extracted 20210912.ISSN-to-ISSN-L.txt, and compressed via: gzip --no-name -9 20210912.ISSN-to-ISSN-L.txt The file was downloaded from https://www.issn.org/wp-content/uploads/2014/03/issnltables.zip
dhimmel
force-pushed
the
linking-issn
branch
from
September 13, 2021 21:42
e95dfac to
bfc7700
Compare
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
closes #7
This PR converts ISSNs from Scopus and the NLM Journal Catalog to linking ISSNs prior to joining. Source ISSNs are converted to linking ISSNs and then filled with the source ISSN in cases where the linking ISSN is missing.
See the diff for
data/pubmed-map.tsvfor the 134 additional mappings added by going through linking ISSNs.