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@WardDeb WardDeb commented Sep 25, 2024

Welcome to deepTools GitHub repository! Please check the following regarding
your pull request :

  • Does the PR contain new feature?

  • Does the PR contain bugfix?

  • Does the PR contain documentation changes?

  • Does the PR contain changes to the galaxy wrapper?

  • action versions boosted

  • conda env for actions removed

  • python 3.8 support dropped, numpy v2 is mininum now, np.NAN dropped (closes Typo/Bug in heatmapper.py script #1322)

  • planemo galaxy branched upped to 24.1

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WardDeb commented Sep 25, 2024

@bgruening Some planemo tests were failing so I upped the GALAXY_BRANCH in the tests to release_24.1 (so far so good!). What I'm not sure about is the GALAXY_VERSION under deepTools_macros.xml. Can we keep this at 22 or should this be boosted as well ?

<token name="@GALAXY_VERSION@">22.05</token>

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This looks all great to me. Sorry was on a conference without internet ...

The GALAXY_VERSION is some kind of upper bound. Those tools need at leat this version ... So no need for a change.

@WardDeb WardDeb merged commit df7573b into develop Oct 5, 2024
@WardDeb WardDeb deleted the np2 branch October 7, 2024 10:25
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3 participants