re-plotHeatmap using outFileNameMatrix #953
Description
Deeptools version 3.4.2
Python version 3.7.5
k=3
plotHeatmap \
--matrixFile regions_of_interest_wrt_iCre_D0.computeMatrix.gz \
--outFileName regions_of_interest_wrt_iCre_D0.heatmap.${k}.testing.pdf \
--outFileSortedRegions regions_of_interest_wrt_iCre_D0.heatmap.${k}.testing.sortedregions.txt \
--outFileNameMatrix regions_of_interest_wrt_iCre_D0.heatmap.${k}.testing.matrix.tab \
--kmeans $k \
--colorMap 'RdBu' \
--whatToShow 'plot, heatmap and colorbar' \
--zMin 0 --zMax 3
The above command runs fine and generates the promised output. I was wondering if it is possible to re-plotHeatmap with the outFileNameMatrix file. This will be convenient if I simply need a new version of the plot with new samplesLable or with a different colorMap.