Cannot print plotCorrelation due to the wrong value in call function set_rotation from matplotlib #1183
Description
Hi, I have encountered a problem while executing command:
plotCorrelation --corData deeptools_analysis/bamSummaryOutput --corMethod pearson --whatToPlot scatterplot --plotFile scatter_limited_pearson.png
Outliers were detected in the data. Consider using the --removeOutliers parameter to avoid a bias in the pearson correlation.
Traceback (most recent call last):
File "/.../bin/plotCorrelation", line 12, in <module>
main(args)
File "/.../python3.10/site-packages/deeptools/plotCorrelation.py", line 239, in main
corr.plot_scatter(args.plotFile,
File "/////python3.10/site-packages/deeptools/correlation.py", line 507, in plot_scatter
tick.label.set_rotation('45')
File "/.../python3.10/site-packages/matplotlib/text.py", line 1196, in set_rotation
raise ValueError("rotation must be 'vertical', 'horizontal' or "
ValueError: rotation must be 'vertical', 'horizontal' or a number, not 45
==================================================
Problem can be repaired by changing the value str '45' for int 45 in /.../deeptools/correlation.py
- deeptools 3.5.1
- python 3.10.8
- matplotlib-base 3.6.2
Best regards, Ola