List of Notebooks related to cellnopt library

Notebooks can be seen within nbviewer.

##Overview:

model and data visualisation and manipulation

• Using BioServices to retrieve a network in SBML-qual format from BioModels. Visualisation with CNOGRaph class cnograph and sbmlqual

• Visualising one of the model available in cellnopt using the cnodata function : datasets module and cnodata function

• Reading a MIDAS file and use the XMIDAS class to manipulate and visualise the data.

• Playing with reactions using the Reaction class

Analysis

• Feeder analysis example