* using log directory ‘/data/gannet/ripley/R/packages/tests-clang-SAN/data.table.Rcheck’
* using R Under development (unstable) (2023-01-18 r83635)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
clang version 15.0.7
GNU Fortran (GCC) 12.2.1 20221121 (Red Hat 12.2.1-4)
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘data.table/DESCRIPTION’ ... OK
* this is package ‘data.table’ version ‘1.14.6’
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package ‘data.table’ can be installed ... [172s/166s] OK
* used C compiler: ‘clang version 15.0.7’
* checking package directory ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [17s/16s] OK
* checking tests ... [555s/516s] ERROR
Running ‘autoprint.R’
Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
Running ‘froll.R’ [206s/191s]
Running ‘knitr.R’
Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
Running ‘main.R’ [323s/301s]
Running ‘nafill.R’
Running ‘other.R’
Running ‘types.R’
Running the tests in ‘tests/main.R’ failed.
Complete output:
> require(data.table)
Loading required package: data.table
>
> test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
getDTthreads(verbose=TRUE):
OpenMP version (_OPENMP) 201811
omp_get_num_procs() 24
R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
R_DATATABLE_NUM_THREADS unset
R_DATATABLE_THROTTLE unset (default 1024)
omp_get_thread_limit() 2
omp_get_max_threads() 24
OMP_THREAD_LIMIT 2
OMP_NUM_THREADS unset
RestoreAfterFork true
data.table is using 2 threads with throttle==1024. See ?setDTthreads.
test.data.table() running: /data/gannet/ripley/R/packages/tests-clang-SAN/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
Test 1613.605 ran without errors but failed check that x equals y:
> x = all.equal(data.table(a = 1), try(stop("this wont work"), silent = TRUE), check.attributes = FALSE)
First 1 of 1 (type 'character'):
[1] "Datasets have different column modes. First 3: a(numeric!=character)"
> y = "target is data.table but current is not and failed to be coerced to it"
First 1 of 1 (type 'character'):
[1] "target is data.table but current is not and failed to be coerced to it"
1 string mismatch
=================================================================
==1738940==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x625005a75018 at pc 0x7f144f9c860a bp 0x7ffc725c6c50 sp 0x7ffc725c6c48
READ of size 4 at 0x625005a75018 thread T0
#0 0x7f144f9c8609 in nqRecreateIndices /data/gannet/ripley/R/packages/tests-clang-SAN/data.table/src/nqrecreateindices.c:29:9
#1 0x55d98c2f1700 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:880:17
#2 0x55d98c45338f in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7947:21
#3 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#4 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#5 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#6 0x55d98c5c378c in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:436:16
#7 0x55d98c5c266c in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:476:10
#8 0x55d98c4adf28 in Rf_DispatchOrEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3900:9
#9 0x55d98c793d30 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:671:16
#10 0x55d98c7937ef in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691:8
#11 0x55d98c434e31 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1088:12
#12 0x55d98c793970 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:657:11
#13 0x55d98c7a4dea in do_subset3 /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:1265:8
#14 0x55d98c434e31 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1088:12
#15 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#16 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#17 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#18 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#19 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#20 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#21 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#22 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#23 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#24 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#25 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#26 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#27 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#28 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#29 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#30 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#31 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#32 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#33 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#34 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#35 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#36 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#37 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#38 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#39 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#40 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#41 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#42 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#43 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#44 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#45 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#46 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#47 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#48 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#49 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#50 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#51 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#52 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#53 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#54 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#55 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#56 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#57 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#58 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#59 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#60 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#61 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#62 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#63 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#64 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#65 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#66 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#67 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#68 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#69 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#70 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#71 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#72 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#73 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#74 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#75 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#76 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#77 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#78 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#79 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#80 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#81 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#82 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#83 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#84 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#85 0x55d98c435393 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1136:12
#86 0x55d98c4aaa29 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3644:9
#87 0x55d98c44a2a9 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7391:14
#88 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#89 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#90 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#91 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#92 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#93 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#94 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#95 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#96 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#97 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#98 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#99 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#100 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#101 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#102 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#103 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#104 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#105 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#106 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#107 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#108 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#109 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#110 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#111 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#112 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#113 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#114 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#115 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#116 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#117 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#118 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#119 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#120 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#121 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#122 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#123 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#124 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#125 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#126 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#127 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#128 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#129 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#130 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#131 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#132 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#133 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#134 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#135 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#136 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#137 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#138 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#139 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#140 0x55d98c459200 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7359:12
#141 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#142 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#143 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#144 0x55d98c435393 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1136:12
#145 0x55d98c56d2f6 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:262:2
#146 0x55d98c570980 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:314:11
#147 0x55d98c570776 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1194:5
#148 0x55d98c570ac2 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1201:5
#149 0x55d98c0ec36c in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29:5
#150 0x7f145fe2950f in __libc_start_call_main (/lib64/libc.so.6+0x2950f) (BuildId: 85c438f4ff93e21675ff174371c9c583dca00b2c)
#151 0x7f145fe295c8 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x295c8) (BuildId: 85c438f4ff93e21675ff174371c9c583dca00b2c)
#152 0x55d98c02a264 in _start (/data/gannet/ripley/R/R-clang-SAN/bin/exec/R+0x31f264)
0x625005a75018 is located 0 bytes to the right of 7960-byte region [0x625005a73100,0x625005a75018)
allocated by thread T0 here:
#0 0x55d98c0aea3e in malloc /data/gannet/ripley/Sources2/LLVM/15.0/llvm-project-15.0.7.src/compiler-rt/lib/asan/asan_malloc_linux.cpp:69:3
#1 0x55d98c584b8c in GetNewPage /data/gannet/ripley/R/svn/R-devel/src/main/memory.c:974:12
#2 0x55d98c58b4dc in Rf_allocVector3 /data/gannet/ripley/R/svn/R-devel/src/main/memory.c:2814:6
#3 0x55d98c78f8c2 in Rf_allocVector /data/gannet/ripley/R/svn/R-devel/src/include/Rinlinedfuns.h:595:12
#4 0x55d98c78f8c2 in Rf_ExtractSubset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:134:5
#5 0x55d98c79513d in VectorSubset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:216:19
#6 0x55d98c79513d in do_subset_dflt /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:863:2
#7 0x55d98c4c78a5 in VECSUBSET_PTR /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5925:10
#8 0x55d98c46c420 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7616:23
#9 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#10 0x55d98c498ae6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c
#11 0x55d98c4944e3 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2109:16
#12 0x55d98c5c378c in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:436:16
#13 0x55d98c5c266c in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:476:10
#14 0x55d98c4adf28 in Rf_DispatchOrEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3900:9
#15 0x55d98c793d30 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:671:16
#16 0x55d98c7937ef in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691:8
#17 0x55d98c434e31 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1088:12
#18 0x55d98c793970 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:657:11
#19 0x55d98c7a4dea in do_subset3 /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:1265:8
#20 0x55d98c434e31 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1088:12
#21 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#22 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#23 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#24 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#25 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#26 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#27 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#28 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#29 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
#30 0x55d98c434a97 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1013:8
#31 0x55d98c491e8e in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:833:8
#32 0x55d98c4c35d8 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5412:15
#33 0x55d98c4c35d8 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5453:14
#34 0x55d98c46b2c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7143:20
SUMMARY: AddressSanitizer: heap-buffer-overflow /data/gannet/ripley/R/packages/tests-clang-SAN/data.table/src/nqrecreateindices.c:29:9 in nqRecreateIndices
Shadow bytes around the buggy address:
0x0c4a80b469b0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
0x0c4a80b469c0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
0x0c4a80b469d0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
0x0c4a80b469e0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
0x0c4a80b469f0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
=>0x0c4a80b46a00: 00 00 00[fa]fa fa fa fa fa fa fa fa fa fa fa fa
0x0c4a80b46a10: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
0x0c4a80b46a20: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
0x0c4a80b46a30: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
0x0c4a80b46a40: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
0x0c4a80b46a50: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa
Shadow byte legend (one shadow byte represents 8 application bytes):
Addressable: 00
Partially addressable: 01 02 03 04 05 06 07
Heap left redzone: fa
Freed heap region: fd
Stack left redzone: f1
Stack mid redzone: f2
Stack right redzone: f3
Stack after return: f5
Stack use after scope: f8
Global redzone: f9
Global init order: f6
Poisoned by user: f7
Container overflow: fc
Array cookie: ac
Intra object redzone: bb
ASan internal: fe
Left alloca redzone: ca
Right alloca redzone: cb
==1738940==ABORTING
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [230s/210s] OK
* DONE
Status: 1 ERROR
