Version Checks (indicate both or one)
Issue Description
When running the default configuration config.default.yaml and regional_co2_sequestration_potential is enabled, I get the following error:
File "/work/users/algro/projects/pypsa-eur/.snakemake/scripts/tmp81kh7_vb.build_co2_sequestration_potentials.py", line 309, in <module>
storage_map = create_capacity_map_storage(table_fn, map_fn)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/work/users/algro/projects/pypsa-eur/.snakemake/scripts/tmp81kh7_vb.build_co2_sequestration_potentials.py", line 89, in create_capacity_map_storage
gdf = gpd.read_file(map_fn)[sel]
~~~~~~~~~~~~~~~~~~~~~^^^^^
[...]
raise KeyError(f"{not_found} not in index")
KeyError: "['id'] not in index"
That's because the files in question data/CO2JRC_OpenFormats/CO2Stop_Polygons Data/StorageUnits_March13.kml and also ata/CO2JRC_OpenFormats/CO2Stop_Polygons Data/DaughterUnits_March13.kml used in the functions create_capacity_map_storage and create_capacity_map_traps don't have "id" but "ID" as field names.
The fix is easy, and just replacing all "id"'s by "ID" in the rule build_co2_sequestration_potentials. If it makes sense, I can make a PR for it tomorrow.
Reproducible Example
snakemake -call all --configfile config/config.default.yaml
Expected Behavior
With the "id" to "ID" change, the rule build_co2_sequestration_potentials runs through.
Installed Versions
Details
name: pypsa-eur
channels:
- bioconda
- gurobi
- conda-forge
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- affine=2.4.0=pyhd8ed1ab_0
- alsa-lib=1.2.12=h4ab18f5_0
- ampl-mp=3.1.0=h2cc385e_1006
- amply=0.1.6=pyhd8ed1ab_0
- appdirs=1.4.4=pyh9f0ad1d_0
- argparse-dataclass=2.0.0=pyhd8ed1ab_0
- asttokens=2.4.1=pyhd8ed1ab_0
- atk-1.0=2.38.0=h04ea711_2
- attrs=24.2.0=pyh71513ae_0
- aws-c-auth=0.7.31=h57bd9a3_0
- aws-c-cal=0.7.4=hfd43aa1_1
- aws-c-common=0.9.28=hb9d3cd8_0
- aws-c-compression=0.2.19=h756ea98_1
- aws-c-event-stream=0.4.3=h29ce20c_2
- aws-c-http=0.8.10=h5e77a74_0
- aws-c-io=0.14.18=h4e6ae90_11
- aws-c-mqtt=0.10.6=h02abb05_0
- aws-c-s3=0.6.6=h834ce55_0
- aws-c-sdkutils=0.1.19=h756ea98_3
- aws-checksums=0.1.20=h756ea98_0
- aws-crt-cpp=0.28.3=h469002c_5
- aws-sdk-cpp=1.11.407=h9f1560d_0
- azure-core-cpp=1.13.0=h935415a_0
- azure-identity-cpp=1.9.0=hd126650_0
- azure-storage-blobs-cpp=12.13.0=h1d30c4a_0
- azure-storage-common-cpp=12.8.0=ha3822c6_0
- azure-storage-files-datalake-cpp=12.12.0=h0f25b8a_0
- beautifulsoup4=4.12.3=pyha770c72_0
- blosc=1.21.6=hef167b5_0
- bokeh=3.5.2=pyhd8ed1ab_0
- bottleneck=1.4.0=py312hc0a28a1_2
- branca=0.7.2=pyhd8ed1ab_0
- brotli=1.1.0=hb9d3cd8_2
- brotli-bin=1.1.0=hb9d3cd8_2
- brotli-python=1.1.0=py312h2ec8cdc_2
- bzip2=1.0.8=h4bc722e_7
- c-ares=1.32.3=h4bc722e_0
- c-blosc2=2.15.1=hc57e6cf_0
- ca-certificates=2024.8.30=hbcca054_0
- cairo=1.18.0=hebfffa5_3
- cartopy=0.23.0=py312hf9745cd_2
- certifi=2024.8.30=pyhd8ed1ab_0
- cffi=1.17.1=py312h06ac9bb_0
- cfgv=3.3.1=pyhd8ed1ab_0
- cfitsio=4.4.1=hf8ad068_0
- cftime=1.6.4=py312hc0a28a1_1
- charset-normalizer=3.3.2=pyhd8ed1ab_0
- click=8.1.7=unix_pyh707e725_0
- click-plugins=1.1.1=py_0
- cligj=0.7.2=pyhd8ed1ab_1
- cloudpickle=3.0.0=pyhd8ed1ab_0
- coin-or-cbc=2.10.12=h8b142ea_1
- coin-or-cgl=0.60.9=h1d3f3f2_0
- coin-or-clp=1.17.10=h07f2a63_0
- coin-or-osi=0.108.11=h6514dde_1
- coin-or-utils=2.11.12=h99da652_1
- coincbc=2.10.12=1_metapackage
- colorama=0.4.6=pyhd8ed1ab_0
- conda-inject=1.3.2=pyhd8ed1ab_0
- configargparse=1.7=pyhd8ed1ab_0
- connection_pool=0.0.3=pyhd3deb0d_0
- contourpy=1.3.0=py312h68727a3_2
- country_converter=1.2=pyhd8ed1ab_0
- cppad=20240000.7=h5888daf_1
- cycler=0.12.1=pyhd8ed1ab_0
- cyrus-sasl=2.1.27=h54b06d7_7
- cytoolz=1.0.0=py312h66e93f0_0
- dask=2024.9.1=pyhd8ed1ab_0
- dask-core=2024.9.1=pyhd8ed1ab_0
- dask-expr=1.1.15=pyhd8ed1ab_0
- datrie=0.8.2=py312h66e93f0_8
- dbus=1.13.6=h5008d03_3
- decorator=5.1.1=pyhd8ed1ab_0
- deprecation=2.1.0=pyh9f0ad1d_0
- descartes=1.1.0=py_4
- distlib=0.3.8=pyhd8ed1ab_0
- distributed=2024.9.1=pyhd8ed1ab_0
- docutils=0.21.2=pyhd8ed1ab_0
- double-conversion=3.3.0=h59595ed_0
- dpath=2.2.0=pyha770c72_0
- entsoe-py=0.6.9=pyhd8ed1ab_0
- et_xmlfile=1.1.0=pyhd8ed1ab_0
- exceptiongroup=1.2.2=pyhd8ed1ab_0
- executing=2.1.0=pyhd8ed1ab_0
- expat=2.6.3=h5888daf_0
- filelock=3.16.1=pyhd8ed1ab_0
- fiona=1.10.1=py312h5aa26c2_1
- fmt=11.0.2=h434a139_0
- folium=0.17.0=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=h77eed37_3
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.54.1=py312h66e93f0_0
- freetype=2.12.1=h267a509_2
- freexl=2.0.0=h743c826_0
- fribidi=1.0.10=h36c2ea0_0
- fsspec=2024.9.0=pyhff2d567_0
- gdal=3.9.2=py312h1299960_7
- gdk-pixbuf=2.42.12=hb9ae30d_0
- geographiclib=2.0=pyhd8ed1ab_0
- geojson=3.1.0=pyhd8ed1ab_0
- geojson-rewind=1.1.0=pyhd8ed1ab_0
- geopandas=1.0.1=pyhd8ed1ab_1
- geopandas-base=1.0.1=pyha770c72_1
- geopy=2.4.1=pyhd8ed1ab_1
- geos=3.13.0=h5888daf_0
- geotiff=1.7.3=h77b800c_3
- gflags=2.2.2=h5888daf_1005
- giflib=5.2.2=hd590300_0
- gitdb=4.0.11=pyhd8ed1ab_0
- gitpython=3.1.43=pyhd8ed1ab_0
- glog=0.7.1=hbabe93e_0
- glpk=5.0=h445213a_0
- gmp=6.3.0=hac33072_2
- graphite2=1.3.13=h59595ed_1003
- graphviz=12.0.0=hba01fac_0
- gtk2=2.24.33=h6470451_5
- gts=0.7.6=h977cf35_4
- gurobi=11.0.3=py312_0
- h2=4.1.0=pyhd8ed1ab_0
- harfbuzz=9.0.0=hda332d3_1
- hdf4=4.2.15=h2a13503_7
- hdf5=1.14.3=nompi_hdf9ad27_105
- hpack=4.0.0=pyh9f0ad1d_0
- humanfriendly=10.0=pyhd8ed1ab_6
- hyperframe=6.0.1=pyhd8ed1ab_0
- icu=75.1=he02047a_0
- identify=2.6.1=pyhd8ed1ab_0
- idna=3.10=pyhd8ed1ab_0
- immutables=0.20=py312h98912ed_1
- importlib-metadata=8.5.0=pyha770c72_0
- importlib_metadata=8.5.0=hd8ed1ab_0
- importlib_resources=6.4.5=pyhd8ed1ab_0
- iniconfig=2.0.0=pyhd8ed1ab_0
- ipopt=3.14.16=h122424a_10
- ipython=8.28.0=pyh707e725_0
- jedi=0.19.1=pyhd8ed1ab_0
- jinja2=3.1.4=pyhd8ed1ab_0
- joblib=1.4.2=pyhd8ed1ab_0
- jpype1=1.5.0=py312h8572e83_1
- json-c=0.18=h6688a6e_0
- jsonschema=4.23.0=pyhd8ed1ab_0
- jsonschema-specifications=2023.12.1=pyhd8ed1ab_0
- jupyter_core=5.7.2=pyh31011fe_1
- kealib=1.5.3=hf8d3e68_2
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.7=py312h68727a3_0
- krb5=1.21.3=h659f571_0
- lcms2=2.16=hb7c19ff_0
- ld_impl_linux-64=2.43=h712a8e2_1
- lerc=4.0.0=h27087fc_0
- libabseil=20240722.0=cxx17_h5888daf_1
- libaec=1.1.3=h59595ed_0
- libarchive=3.7.4=hfca40fe_0
- libarrow=17.0.0=h364f349_19_cpu
- libarrow-acero=17.0.0=h5888daf_19_cpu
- libarrow-dataset=17.0.0=h5888daf_19_cpu
- libarrow-substrait=17.0.0=he882d9a_19_cpu
- libblas=3.9.0=24_linux64_openblas
- libbrotlicommon=1.1.0=hb9d3cd8_2
- libbrotlidec=1.1.0=hb9d3cd8_2
- libbrotlienc=1.1.0=hb9d3cd8_2
- libcblas=3.9.0=24_linux64_openblas
- libclang-cpp19.1=19.1.0=default_hb5137d0_0
- libclang13=19.1.0=default_h9c6a7e4_0
- libcrc32c=1.1.2=h9c3ff4c_0
- libcups=2.3.3=h4637d8d_4
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- libdeflate=1.22=hb9d3cd8_0
- libdrm=2.4.123=hb9d3cd8_0
- libedit=3.1.20191231=he28a2e2_2
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- libgdal-pdf=3.9.2=h600f43f_7
- libgdal-pg=3.9.2=h5e77dd0_7
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- libgdal-tiledb=3.9.2=h4a3bace_7
- libgdal-xls=3.9.2=h03c987c_7
- libgfortran=14.1.0=h69a702a_1
- libgfortran-ng=14.1.0=h69a702a_1
- libgfortran5=14.1.0=hc5f4f2c_1
- libgl=1.7.0=ha4b6fd6_1
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- libglvnd=1.7.0=ha4b6fd6_1
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- libgomp=14.1.0=h77fa898_1
- libgoogle-cloud=2.29.0=h438788a_1
- libgoogle-cloud-storage=2.29.0=h0121fbd_1
- libgrpc=1.65.5=hf5c653b_0
- libhwloc=2.11.1=default_hecaa2ac_1000
- libiconv=1.17=hd590300_2
- libjpeg-turbo=3.0.0=hd590300_1
- libkml=1.3.0=hf539b9f_1021
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- liblapacke=3.9.0=24_linux64_openblas
- libllvm19=19.1.1=ha7bfdaf_0
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- libnghttp2=1.58.0=h47da74e_1
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- libntlm=1.4=h7f98852_1002
- libopenblas=0.3.27=pthreads_hac2b453_1
- libopengl=1.7.0=ha4b6fd6_1
- libparquet=17.0.0=h6bd9018_19_cpu
- libpciaccess=0.18=hd590300_0
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- libstdcxx=14.1.0=hc0a3c3a_1
- libstdcxx-ng=14.1.0=h4852527_1
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- libtiff=4.7.0=he137b08_1
- libutf8proc=2.8.0=h166bdaf_0
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- libxkbcommon=1.7.0=h2c5496b_1
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- libxslt=1.1.39=h76b75d6_0
- libzip=1.11.1=hf83b1b0_0
- libzlib=1.3.1=hb9d3cd8_2
- linopy=0.3.14=pyhd8ed1ab_0
- locket=1.0.0=pyhd8ed1ab_0
- lxml=5.3.0=py312he28fd5a_1
- lz4=4.3.3=py312hb3f7f12_1
- lz4-c=1.9.4=hcb278e6_0
- lzo=2.10=hd590300_1001
- mapclassify=2.8.1=pyhd8ed1ab_0
- markupsafe=2.1.5=py312h66e93f0_1
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- matplotlib-base=3.9.2=py312hd3ec401_1
- matplotlib-inline=0.1.7=pyhd8ed1ab_0
- memory_profiler=0.61.0=pyhd8ed1ab_0
- metis=5.1.0=hd0bcaf9_1007
- minizip=4.0.7=h401b404_0
- mpfr=4.2.1=h90cbb55_3
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- mumps-include=5.7.3=ha770c72_5
- mumps-seq=5.7.3=h27a6a8b_0
- munkres=1.1.4=pyh9f0ad1d_0
- mysql-common=9.0.1=h266115a_1
- mysql-libs=9.0.1=he0572af_1
- nbformat=5.10.4=pyhd8ed1ab_0
- ncurses=6.5=he02047a_1
- netcdf4=1.7.1=nompi_py312h21d6d8e_102
- networkx=3.3=pyhd8ed1ab_1
- nodeenv=1.9.1=pyhd8ed1ab_0
- nomkl=1.0=h5ca1d4c_0
- nspr=4.35=h27087fc_0
- nss=3.105=hd34e28f_0
- numexpr=2.10.0=py312hf412c99_100
- numpy=1.26.4=py312heda63a1_0
- openjpeg=2.5.2=h488ebb8_0
- openldap=2.6.8=hedd0468_0
- openpyxl=3.1.5=py312h710cb58_1
- openssl=3.3.2=hb9d3cd8_0
- orc=2.0.2=h690cf93_1
- packaging=24.1=pyhd8ed1ab_0
- pandas=2.2.3=py312hf9745cd_1
- pango=1.54.0=h4c5309f_1
- parso=0.8.4=pyhd8ed1ab_0
- partd=1.4.2=pyhd8ed1ab_0
- patsy=0.5.6=pyhd8ed1ab_0
- pcre2=10.44=hba22ea6_2
- pexpect=4.9.0=pyhd8ed1ab_0
- pickleshare=0.7.5=py_1003
- pillow=10.4.0=py312h56024de_1
- pip=24.2=pyh8b19718_1
- pixman=0.43.2=h59595ed_0
- pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1
- plac=1.4.3=pyhd8ed1ab_0
- platformdirs=4.3.6=pyhd8ed1ab_0
- pluggy=1.5.0=pyhd8ed1ab_0
- polars=1.9.0=py312hfe7c9be_0
- poppler=24.08.0=h47131b8_1
- poppler-data=0.4.12=hd8ed1ab_0
- postgresql=17.0=h1122569_2
- powerplantmatching=0.5.19=pyhd8ed1ab_0
- pre-commit=4.0.0=pyha770c72_0
- progressbar2=4.5.0=pyhd8ed1ab_0
- proj=9.5.0=h12925eb_0
- prompt-toolkit=3.0.48=pyha770c72_0
- psutil=6.0.0=py312h66e93f0_1
- pthread-stubs=0.4=hb9d3cd8_1002
- ptyprocess=0.7.0=pyhd3deb0d_0
- pulp=2.8.0=py312h7900ff3_0
- pure_eval=0.2.3=pyhd8ed1ab_0
- py-cpuinfo=9.0.0=pyhd8ed1ab_0
- pyarrow=17.0.0=py312h9cebb41_1
- pyarrow-core=17.0.0=py312h9cafe31_1_cpu
- pyarrow-hotfix=0.6=pyhd8ed1ab_0
- pycountry=24.6.1=pyhd8ed1ab_0
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- pyogrio=0.10.0=py312he8b4914_0
- pyparsing=3.1.4=pyhd8ed1ab_0
- pyproj=3.7.0=py312he630544_0
- pypsa=0.31.0=pyhd8ed1ab_0
- pyscipopt=5.1.1=py312h7070661_0
- pyshp=2.3.1=pyhd8ed1ab_0
- pyside6=6.7.3=py312h91f0f75_1
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- pytables=3.10.1=py312h1d844bd_1
- pytest=8.3.3=pyhd8ed1ab_0
- python=3.12.7=hc5c86c4_0_cpython
- python-dateutil=2.9.0=pyhd8ed1ab_0
- python-fastjsonschema=2.20.0=pyhd8ed1ab_0
- python-tzdata=2024.2=pyhd8ed1ab_0
- python-utils=3.8.2=pyhd8ed1ab_0
- python_abi=3.12=5_cp312
- pytz=2024.1=pyhd8ed1ab_0
- pyxlsb=1.0.10=pyhd8ed1ab_0
- pyyaml=6.0.2=py312h66e93f0_1
- qhull=2020.2=h434a139_5
- qt6-main=6.7.3=h6e8976b_1
- rasterio=1.3.11=py312h19b0530_2
- re2=2023.09.01=h77b4e00_3
- readline=8.2=h8228510_1
- referencing=0.35.1=pyhd8ed1ab_0
- requests=2.32.3=pyhd8ed1ab_0
- reretry=0.11.8=pyhd8ed1ab_0
- rioxarray=0.17.0=pyhd8ed1ab_0
- rpds-py=0.20.0=py312h12e396e_1
- s2n=1.5.4=h1380c3d_0
- scikit-learn=1.5.2=py312h7a48858_1
- scip=9.1.1=h445098e_0
- scipy=1.14.1=py312h7d485d2_0
- seaborn=0.13.2=hd8ed1ab_2
- seaborn-base=0.13.2=pyhd8ed1ab_2
- setuptools=75.1.0=pyhd8ed1ab_0
- shapely=2.0.6=py312h391bc85_2
- six=1.16.0=pyh6c4a22f_0
- smart_open=7.0.5=pyhd8ed1ab_1
- smmap=5.0.0=pyhd8ed1ab_0
- snakemake-interface-common=1.17.4=pyhdfd78af_0
- snakemake-interface-executor-plugins=9.3.2=pyhdfd78af_0
- snakemake-interface-report-plugins=1.1.0=pyhdfd78af_0
- snakemake-interface-storage-plugins=3.3.0=pyhdfd78af_0
- snakemake-minimal=8.20.5=pyhdfd78af_0
- snappy=1.2.1=ha2e4443_0
- snuggs=1.4.7=pyhd8ed1ab_1
- sortedcontainers=2.4.0=pyhd8ed1ab_0
- soupsieve=2.5=pyhd8ed1ab_1
- spdlog=1.14.1=hed91bc2_1
- sqlite=3.46.1=h9eae976_0
- stack_data=0.6.2=pyhd8ed1ab_0
- statsmodels=0.14.4=py312hc0a28a1_0
- tabulate=0.9.0=pyhd8ed1ab_1
- tbb=2021.13.0=h84d6215_0
- tblib=3.0.0=pyhd8ed1ab_0
- threadpoolctl=3.5.0=pyhc1e730c_0
- throttler=1.2.2=pyhd8ed1ab_0
- tiledb=2.26.2=hedb9d39_0
- tk=8.6.13=noxft_h4845f30_101
- tomli=2.0.2=pyhd8ed1ab_0
- toolz=1.0.0=pyhd8ed1ab_0
- toposort=1.10=pyhd8ed1ab_0
- tornado=6.4.1=py312h66e93f0_1
- tqdm=4.66.5=pyhd8ed1ab_0
- traitlets=5.14.3=pyhd8ed1ab_0
- typing-extensions=4.12.2=hd8ed1ab_0
- typing_extensions=4.12.2=pyha770c72_0
- tzcode=2024b=hb9d3cd8_0
- tzdata=2024b=hc8b5060_0
- ukkonen=1.0.1=py312h68727a3_5
- unidecode=1.3.8=pyhd8ed1ab_0
- unixodbc=2.3.12=h661eb56_0
- uriparser=0.9.8=hac33072_0
- urllib3=2.2.3=pyhd8ed1ab_0
- validators=0.34.0=pyhd8ed1ab_0
- virtualenv=20.26.6=pyhd8ed1ab_0
- wayland=1.23.1=h3e06ad9_0
- wcwidth=0.2.13=pyhd8ed1ab_0
- wheel=0.44.0=pyhd8ed1ab_0
- wrapt=1.16.0=py312h66e93f0_1
- xarray=2024.9.0=pyhd8ed1ab_0
- xcb-util=0.4.1=hb711507_2
- xcb-util-cursor=0.1.5=hb9d3cd8_0
- xcb-util-image=0.4.0=hb711507_2
- xcb-util-keysyms=0.4.1=hb711507_0
- xcb-util-renderutil=0.3.10=hb711507_0
- xcb-util-wm=0.4.2=hb711507_0
- xerces-c=3.2.5=h988505b_2
- xkeyboard-config=2.43=hb9d3cd8_0
- xlrd=2.0.1=pyhd8ed1ab_3
- xorg-libice=1.1.1=hb9d3cd8_1
- xorg-libsm=1.2.4=he73a12e_1
- xorg-libx11=1.8.10=h4f16b4b_0
- xorg-libxau=1.0.11=hb9d3cd8_1
- xorg-libxcomposite=0.4.6=hb9d3cd8_2
- xorg-libxcursor=1.2.2=hb9d3cd8_0
- xorg-libxdamage=1.1.6=hb9d3cd8_0
- xorg-libxdmcp=1.1.5=hb9d3cd8_0
- xorg-libxext=1.3.6=hb9d3cd8_0
- xorg-libxfixes=6.0.1=hb9d3cd8_0
- xorg-libxi=1.8.2=hb9d3cd8_0
- xorg-libxrandr=1.5.4=hb9d3cd8_0
- xorg-libxrender=0.9.11=hb9d3cd8_1
- xorg-libxtst=1.2.5=hb9d3cd8_3
- xorg-libxxf86vm=1.1.5=hb9d3cd8_3
- xorg-xorgproto=2024.1=hb9d3cd8_1
- xyzservices=2024.9.0=pyhd8ed1ab_0
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- yte=1.5.4=pyha770c72_0
- zict=3.0.0=pyhd8ed1ab_0
- zipp=3.20.2=pyhd8ed1ab_0
- zlib=1.3.1=hb9d3cd8_2
- zlib-ng=2.2.2=h5888daf_0
- zstandard=0.23.0=py312hef9b889_1
- zstd=1.5.6=ha6fb4c9_0
- pip:
- asciitree==0.3.3
- atlite==0.2.14.post1.dev19+g481f3af
- cads-api-client==1.5.2
- cdsapi==0.7.4
- fasteners==0.19
- h5netcdf==1.4.1
- h5py==3.12.1
- highspy==1.7.2
- multiurl==0.3.2
- numcodecs==0.14.1
- oauthlib==3.2.2
- ply==3.11
- pyomo==6.8.0
- requests-oauthlib==1.3.1
- snakemake-executor-plugin-cluster-generic==1.0.9
- snakemake-executor-plugin-slurm==0.11.0
- snakemake-executor-plugin-slurm-jobstep==0.2.1
- snakemake-storage-plugin-http==0.2.3
- tsam==2.3.5
- zarr==2.18.3
prefix: /home/algro/miniforge3/envs/pypsa-eur
