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Description
After first setup following the readme I run into the following issue when running snakemake:
File "/home/pypsa/pypsa-eur/.snakemake/scripts/tmpd0ajxt9a.build_shapes.py", line 21, in _get_country
return getattr(pyc.countries.get(**keys), target)
AttributeError: 'NoneType' object has no attribute 'alpha_3'
[Thu Feb 7 10:32:17 2019]
Error in rule build_shapes:
jobid: 14
output: resources/country_shapes.geojson, resources/offshore_shapes.geojson, resources/europe_shape.geojson, resources/nuts3_shapes.geojson
RuleException:
CalledProcessError in line 81 of /home/pypsa/pypsa-eur/Snakefile:
Command ' set -euo pipefail; /home/.conda/envs/pypsa-eur/bin/python3.6 /home/pypsa/pypsa-eur/.snakemake/scripts/tmpd0ajxt9a.build_shapes.py ' returned non-zero exit status 1.
File "/home/pypsa/pypsa-eur/Snakefile", line 81, in __rule_build_shapes
File "/home/.conda/envs/pypsa-eur/lib/python3.6/concurrent/futures/thread.py", line 56, in run
Removing output files of failed job build_shapes since they might be corrupted:
resources/country_shapes.geojson
Shutting down, this might take some time.
Exiting because a job execution failed. Look above for error message
Complete log: /home/pypsa/pypsa-eur/.snakemake/log/2019-02-07T102832.252956.snakemake.log
I've tried going back to Fiona 1.8.3 instead of 1.8.4, but that doesn't seem to solve the issue.
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