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Tutorial to run train/evaluation/inference for a 2D/3D Deepgrow Model#88

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wyli merged 11 commits intoProject-MONAI:masterfrom
SachidanandAlle:master
Mar 18, 2021
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Tutorial to run train/evaluation/inference for a 2D/3D Deepgrow Model#88
wyli merged 11 commits intoProject-MONAI:masterfrom
SachidanandAlle:master

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@SachidanandAlle SachidanandAlle commented Dec 14, 2020

Depends on: Project-MONAI/MONAI#1395

Deepgrow Examples

This folder contains examples to run train and validate a deepgrow 2D/3D model.
It also has notebooks to run inference over trained model.

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@SachidanandAlle SachidanandAlle changed the title [WIP] Tutorial to train a 2D Deepgrow Model [WIP] Tutorial to run train/evaluation/inference for a 2D/3D Deepgrow Model Dec 23, 2020
Signed-off-by: Sachidanand Alle <[email protected]>
Signed-off-by: Sachidanand Alle <[email protected]>
Signed-off-by: Sachidanand Alle <[email protected]>
@SachidanandAlle SachidanandAlle changed the title [WIP] Tutorial to run train/evaluation/inference for a 2D/3D Deepgrow Model Tutorial to run train/evaluation/inference for a 2D/3D Deepgrow Model Feb 9, 2021
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@wyli @Nic-Ma

The tutorial examples are verified by me and YuanTingHsieh.. and its ready for final review

Signed-off-by: Sachidanand Alle <[email protected]>
@wyli wyli merged commit b4a9349 into Project-MONAI:master Mar 18, 2021
boneseva pushed a commit to boneseva/MONAI-tutorials that referenced this pull request Apr 21, 2024
…Project-MONAI#88)

* Tutorial to train a 2D Deepgrow Model

* Deepgrow train/validate/inference example

* update train/val examples + add dataset create example

Signed-off-by: Sachidanand Alle <[email protected]>

* fix monai changes

Signed-off-by: Sachidanand Alle <[email protected]>

* clean up + fix loadnifitd

Signed-off-by: Sachidanand Alle <[email protected]>

* fix comments

Signed-off-by: Sachidanand Alle <[email protected]>

* after verifying for both 2D train+validate on spleen dataset

Signed-off-by: Sachidanand Alle <[email protected]>

* Fix build

Signed-off-by: Sachidanand Alle <[email protected]>

* Add/Update Readme + Fix based on MONAI master

Signed-off-by: Sachidanand Alle <[email protected]>

* Fix name for RestoreLabeld

Signed-off-by: Sachidanand Alle <[email protected]>

Co-authored-by: Sachidanand Alle <[email protected]>
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