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Fix wrong algorithm folder name parsing in ensemble after HPO in Auto3DSeg#5561

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wyli merged 1 commit intoProject-MONAI:devfrom
mingxin-zheng:fix-5558
Nov 22, 2022
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Fix wrong algorithm folder name parsing in ensemble after HPO in Auto3DSeg#5561
wyli merged 1 commit intoProject-MONAI:devfrom
mingxin-zheng:fix-5558

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Signed-off-by: Mingxin Zheng [email protected]

Fixes #5558 .

Description

A few sentences describing the changes proposed in this pull request.

Types of changes

  • Non-breaking change (fix or new feature that would not break existing functionality).
  • Integration tests passed locally by running python tests/test_integration_autorunner.py.

@mingxin-zheng mingxin-zheng changed the title [WIP] fix wrong algorithm folder name parsing Fix wrong algorithm folder name parsing in ensemble after HPO in Auto3DSeg Nov 22, 2022
@mingxin-zheng mingxin-zheng requested review from myron and wyli November 22, 2022 18:17
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wyli commented Nov 22, 2022

/build

@wyli wyli enabled auto-merge (squash) November 22, 2022 18:28
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myron commented Nov 22, 2022

mmm , I'm okay with this change.
But now we're assuming the algorithm name has no underscores "_", otherwise it'll get a wrong a result.
But it's still better then to assume that fold number is always the last number (as currently).

I think we can merge it, and think of a better way to track the fold number , instead of parsing the name of the folder/algorithm
@mingxin-zheng

@wyli wyli merged commit a8f67e4 into Project-MONAI:dev Nov 22, 2022
bhashemian pushed a commit to bhashemian/MONAI that referenced this pull request Nov 23, 2022
…3DSeg (Project-MONAI#5561)

Signed-off-by: Mingxin Zheng
<[email protected]>

Fixes Project-MONAI#5558 .

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [x] Integration tests passed locally by running `python
tests/test_integration_autorunner.py`.

Signed-off-by: Mingxin Zheng <[email protected]>
Signed-off-by: Behrooz <[email protected]>
bhashemian pushed a commit to bhashemian/MONAI that referenced this pull request Nov 23, 2022
…3DSeg (Project-MONAI#5561)

Signed-off-by: Mingxin Zheng
<[email protected]>

Fixes Project-MONAI#5558 .

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [x] Integration tests passed locally by running `python
tests/test_integration_autorunner.py`.

Signed-off-by: Mingxin Zheng <[email protected]>
Signed-off-by: Behrooz <[email protected]>
@mingxin-zheng mingxin-zheng deleted the fix-5558 branch December 1, 2022 04:59
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Auto3DSeg ensembler module doesn't work with Bundle Algorithms generated by the HPO Module

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