Signed-off-by: Yashika Jain <[email protected]>

Signed-off-by: Yashika Jain <[email protected]>

Signed-off-by: Yashika Jain <[email protected]>

Signed-off-by: Yashika Jain <[email protected]>

for more information, see https://pre-commit.ci

Signed-off-by: Yashika Jain <[email protected]>

Signed-off-by: Yashika Jain <[email protected]>

Signed-off-by: Yashika Jain <[email protected]>

for more information, see https://pre-commit.ci

Signed-off-by: Yashika Jain <[email protected]>

### Description
This allows `default_prepare_batch` to handle batches containing a single tensor or a pair of tensors. Normally if one uses array transforms you'll get an error saying the default batch function needs dictionaries so this will allow such transform sequences to be used without modification.

### Status
**Work in progress**

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [x] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [x] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: Eric Kerfoot <[email protected]>
Co-authored-by: Wenqi Li <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

Fixes Project-MONAI#4909


### Status
**Ready**

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: Wenqi Li <[email protected]>

Fixes Project-MONAI#4554. 

Requires latest Ignite RC.

Also improves ClientAlgo docstrings formatting.

### Description
A few sentences describing the changes proposed in this pull request.

### Status
**Ready**

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: Holger Roth <[email protected]>
Signed-off-by: Nic Ma <[email protected]>
Signed-off-by: monai-bot <[email protected]>
Co-authored-by: Nic Ma <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: monai-bot <[email protected]>

Signed-off-by: Eric Kerfoot <[email protected]>

### Description
Numpy arrays with type uint16, uint32, and uint64 need to be converted to signed versions before conversion to Pytorch tensors. This is relevant because MR data is often stored in uint16 format.

### Status
**Ready**

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [x] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: Eric Kerfoot <[email protected]>

Signed-off-by: Eric Kerfoot <[email protected]>

### Description
Using `view` to avoid copying doesn't actually work as intended in the type conversion to use `astype`.

### Status
**Ready**

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: Eric Kerfoot <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

…roject-MONAI#5087)

### Description
Part of the requested improvements Project-MONAI#5085 

Planned fixes
- [x] fold number is not being updated in generate()
- [x] put absolute paths in the bundle configs
- [x] break the auto-generated auto_config into multiple files.

### Status
WIP

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: Mingxin Zheng <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Nic Ma <[email protected]>

### Description
This PR remove "Status" from PR template. The Status was very useful before GitHub introduced *Draft* PR. I believe right now it is redundant to have this and sometimes conflicting (e.g., Status Ready <> Draft PR), so I believe it is time to remove the "Status" from PR template.


### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).

Signed-off-by: Behrooz <[email protected]>

Signed-off-by: KumoLiu <[email protected]>

Fixes # .

### Description
Fix docstring in auto3dseg

### Status
**Work in progress**

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not applicable items -->
- [x] Non-breaking change (fix or new feature that would not break existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u --net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick --unittests  --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/` folder.

Signed-off-by: KumoLiu <[email protected]>
Signed-off-by: Wenqi Li <[email protected]>
Co-authored-by: Wenqi Li <[email protected]>
Co-authored-by: Wenqi Li <[email protected]>

Signed-off-by: Wenqi Li <[email protected]>

Fixes Project-MONAI#5070 .

### Description

The batch size for the contrastive loss is estimated automatically

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing
functionality to change).
- [x] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u
--net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick
--unittests --disttests`.
- [x] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/`
folder.

Signed-off-by: a-parida12 <[email protected]>
Signed-off-by: monai-bot <[email protected]>
Co-authored-by: monai-bot <[email protected]>

Signed-off-by: Wenqi Li <[email protected]>