New segmentation loss functions and metrics#4444
Merged
wyli merged 7 commits intoProject-MONAI:devfrom Jun 3, 2022
jlcsilva:dev
Merged
New segmentation loss functions and metrics#4444wyli merged 7 commits intoProject-MONAI:devfrom jlcsilva:dev
wyli merged 7 commits intoProject-MONAI:devfrom
jlcsilva:dev
Conversation
…to metrics. Added function to check whether tensors are binarized to metrics.util and refactored metrics to use it. Signed-off-by: João Lourenço Silva <[email protected]>
wyli
reviewed
Jun 2, 2022
…ame of the tensor as argument and issue warnings directly
…ons-and-metrics Refactored monai.metrics.utils.is_binary_tensor function to receive n…
Contributor
Author
Didn't notice new files had been generated there. I think it is ok now |
wyli
reviewed
Jun 2, 2022
Contributor
|
/integration-test |
wyli
approved these changes
Jun 3, 2022
Contributor
wyli
left a comment
There was a problem hiding this comment.
Thank you, this improves metrics and losses and with all changes verified.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Signed-off-by: João Lourenço Silva [email protected]
Description
Added Generalized Dice Focal Loss and Generalized Dice Score metric. Implemented function in metrics.utils to check whether tensors are binarized and refactored existing metrics to use it.
Status
Ready
Types of changes
./runtests.sh -f -u --net --coverage../runtests.sh --quick --unittests --disttests.make htmlcommand in thedocs/folder.