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Add DeepEdit transforms and interaction#4164

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wyli merged 22 commits intoProject-MONAI:devfrom
diazandr3s:addDeepEditTransforms
Apr 27, 2022
Merged

Add DeepEdit transforms and interaction#4164
wyli merged 22 commits intoProject-MONAI:devfrom
diazandr3s:addDeepEditTransforms

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Signed-off-by: Andres Diaz-Pinto [email protected]

Description

  • Add deepedit transforms currently in MONAI Label repo
  • Add Interaction class for multilabel deepedit
  • Add TensorBoard Handler to debug multilabel deepedit

These changes help to reduce code in MONAI Label repo and DeepEdit tutorial

Status

Ready

@diazandr3s diazandr3s added the enhancement New feature or request label Apr 24, 2022
@diazandr3s diazandr3s requested review from Nic-Ma and wyli April 24, 2022 11:21
@diazandr3s diazandr3s self-assigned this Apr 24, 2022
Signed-off-by: Andres Diaz-Pinto <[email protected]>
@diazandr3s diazandr3s requested a review from wyli April 26, 2022 13:42
Signed-off-by: Andres Diaz-Pinto <[email protected]>
Signed-off-by: Andres Diaz-Pinto <[email protected]>
Signed-off-by: Andres Diaz-Pinto <[email protected]>
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Thanks @diazandr3s, the PR looks good, I put only some minor comments inline, mainly to remove unused comments and renaming the components for clarity, please consider. There are automatic warnings https://deepsource.io/gh/Project-MONAI/MONAI/run/f3635017-30df-4abf-afc4-32f406d4a57c/python/ please also help revise if possible (this part is optional but I think some of the suggestions are useful).

@diazandr3s diazandr3s requested a review from wyli April 27, 2022 11:28
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wyli commented Apr 27, 2022

/black

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wyli commented Apr 27, 2022

/build

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wyli commented Apr 27, 2022

/build

@wyli wyli changed the title Add DeepEdit transforms, custom handler, and interaction Add DeepEdit transforms and interaction Apr 27, 2022
@wyli wyli enabled auto-merge (squash) April 27, 2022 14:39
@wyli wyli merged commit 5777041 into Project-MONAI:dev Apr 27, 2022
Can-Zhao pushed a commit to Can-Zhao/MONAI that referenced this pull request May 10, 2022
* Add DeepEdit transforms and interaction

Signed-off-by: Andres Diaz-Pinto <[email protected]>
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3 participants