2532 revert dynunet change for backward compatibility#2534
Merged
diazandr3s merged 1 commit intoProject-MONAI:devfrom Jul 6, 2021
Merged
2532 revert dynunet change for backward compatibility#2534diazandr3s merged 1 commit intoProject-MONAI:devfrom
diazandr3s merged 1 commit intoProject-MONAI:devfrom
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Signed-off-by: Wenqi Li <[email protected]>
wyli
requested review from
Nic-Ma,
diazandr3s,
ericspod,
rijobro and
yiheng-wang-nv
Contributor
Author
|
This PR resumes the previous module and test. It also passes this test: script adapted from https://github.com/Project-MONAI/MONAILabel/blob/main/sample-apps/deepedit_left_atrium/main.py import os
import torch
from monai.networks.nets.dynunet_v1 import DynUNetV1 as DynUNet
net = DynUNet(
spatial_dims=3,
in_channels=3,
out_channels=1,
kernel_size=[
[3, 3, 3],
[3, 3, 3],
[3, 3, 3],
[3, 3, 3],
[3, 3, 3],
[3, 3, 3],
],
strides=[
[1, 1, 1],
[2, 2, 2],
[2, 2, 2],
[2, 2, 2],
[2, 2, 2],
[2, 2, 1],
],
upsample_kernel_size=[
[2, 2, 2],
[2, 2, 2],
[2, 2, 2],
[2, 2, 2],
[2, 2, 1],
],
norm_name="instance",
deep_supervision=False,
res_block=True,
)
pretrained_model = os.path.join("deepedit_left_atrium.pt")
ckpt = torch.load(pretrained_model, map_location="cpu")
net.load_state_dict(ckpt)
print(ckpt) |
Contributor
Many thanks for this @wyli This solved the incompatibility issue! |
diazandr3s
approved these changes
Jul 6, 2021
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Solves the incompatibility issue
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Signed-off-by: Wenqi Li [email protected]
Fixes #2532
Description
could import this module by
from monai.networks.nets.dynunet_v1 import DynUNetV1 as DynUNet(this version is from MONAI v0.5.3)
Status
Ready
Types of changes
./runtests.sh -f -u --net --coverage../runtests.sh --quick --unittests.make htmlcommand in thedocs/folder.